General Data

RNA Type	unknown
Original Source	Sci-ModoM
Transcript ID:	ENST00000564201
Gene ID:	ENSG00000123358
Gene Name:	NR4A1
Sequence (UNICHARACTER ENCODING)	GAAGGCAGGUGGACAAGGGCCCAUGAAAAAAUACЖGGUGUCUAGACUGCCAGGGAGACCCUGGCCCCCAGUAGUGUGUCCUGGGGACUUCCUCAGAGCGAGAAACCUCCCCCAAUGUCUUCAAGACUUUUCUCUCCCCCCGCCCAACCCCGUCUCUCCCUCCCUUGCCACCCAAAUGUUAGAAAAAUAGCUGUGAACAGAGAGCGCUUUUGUCUGCAAUGGCAGCAGGAUCUGGACGGUCCCCUCCCCUAAGUUCCCCCCUCCCCACCCCACACUCUGACAGCUUGUUCCGUGUUGCCCCCCCACCCAGCGCACAGUGCAGAAAAACGCCAAGUACAUCUGCCUGGCUAACAAGGЖCUGCCCUGUGGACAAGAGGCGGCGAAACCGCUGCCAGUUCUGCCGCUUCCAGAAGUGCCUGGCGGUGGGCAUGGUGAAGGAAGGUUUGUCCGAACAGACAGCCUGAAGGGGCGGCGGGGCCGGCUACCUUCAAAACCCAAGCAGCCCCCAGAUGCCUCCCCUGCCAAUCUCCUCACUUCCCUGGUCCGUGCACACCUGGACUCAGGGCCCAGCACUGCCAAACUGGACUACUCCAAGGUGAGGUCCCACCCCGUGUCUGCCUUGGGGAGGUCUAUGAGCACAUGCAGUGCCUUUGUGCGUGUUAGGAGAGCUACCCCCUCUGGAAGGЖCUGAAUGAGAAAGGAGGUUUAAAAAAGAAAGAAAGAAAAGCGACUCCCUCCAGUUCGACAGAUCAAAG
Sequence (SHORT NAMES ENCODING)	GAAGGCAGGUGGACAAGGGCCCAUGAAAAAAUACm6AGGUGUCUAGACUGCCAGGGAGACCCUGGCCCCCAGUAGUGUGUCCUGGGGACUUCCUCAGAGCGAGAAACCUCCCCCAAUGUCUUCAAGACUUUUCUCUCCCCCCGCCCAACCCCGUCUCUCCCUCCCUUGCCACCCAAAUGUUAGAAAAAUAGCUGUGAACAGAGAGCGCUUUUGUCUGCAAUGGCAGCAGGAUCUGGACGGUCCCCUCCCCUAAGUUCCCCCCUCCCCACCCCACACUCUGACAGCUUGUUCCGUGUUGCCCCCCCACCCAGCGCACAGUGCAGAAAAACGCCAAGUACAUCUGCCUGGCUAACAAGGm6ACUGCCCUGUGGACAAGAGGCGGCGAAACCGCUGCCAGUUCUGCCGCUUCCAGAAGUGCCUGGCGGUGGGCAUGGUGAAGGAAGGUUUGUCCGAACAGACAGCCUGAAGGGGCGGCGGGGCCGGCUACCUUCAAAACCCAAGCAGCCCCCAGAUGCCUCCCCUGCCAAUCUCCUCACUUCCCUGGUCCGUGCACACCUGGACUCAGGGCCCAGCACUGCCAAACUGGACUACUCCAAGGUGAGGUCCCACCCCGUGUCUGCCUUGGGGAGGUCUAUGAGCACAUGCAGUGCCUUUGUGCGUGUUAGGAGAGCUACCCCCUCUGGAAGGm6ACUGAAUGAGAAAGGAGGUUUAAAAAAGAAAGAAAGAAAAGCGACUCCCUCCAGUUCGACAGAUCAAAG
Sequence (MODOMICS CODE ENCODING)	GAAGGCAGGUGGACAAGGGCCCAUGAAAAAAUAC2000000006AGGUGUCUAGACUGCCAGGGAGACCCUGGCCCCCAGUAGUGUGUCCUGGGGACUUCCUCAGAGCGAGAAACCUCCCCCAAUGUCUUCAAGACUUUUCUCUCCCCCCGCCCAACCCCGUCUCUCCCUCCCUUGCCACCCAAAUGUUAGAAAAAUAGCUGUGAACAGAGAGCGCUUUUGUCUGCAAUGGCAGCAGGAUCUGGACGGUCCCCUCCCCUAAGUUCCCCCCUCCCCACCCCACACUCUGACAGCUUGUUCCGUGUUGCCCCCCCACCCAGCGCACAGUGCAGAAAAACGCCAAGUACAUCUGCCUGGCUAACAAGG2000000006ACUGCCCUGUGGACAAGAGGCGGCGAAACCGCUGCCAGUUCUGCCGCUUCCAGAAGUGCCUGGCGGUGGGCAUGGUGAAGGAAGGUUUGUCCGAACAGACAGCCUGAAGGGGCGGCGGGGCCGGCUACCUUCAAAACCCAAGCAGCCCCCAGAUGCCUCCCCUGCCAAUCUCCUCACUUCCCUGGUCCGUGCACACCUGGACUCAGGGCCCAGCACUGCCAAACUGGACUACUCCAAGGUGAGGUCCCACCCCGUGUCUGCCUUGGGGAGGUCUAUGAGCACAUGCAGUGCCUUUGUGCGUGUUAGGAGAGCUACCCCCUCUGGAAGG2000000006ACUGAAUGAGAAAGGAGGUUUAAAAAAGAAAGAAAGAAAAGCGACUCCCUCCAGUUCGACAGAUCAAAG

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	35	356	684
Modification Positions	m6A	m6A	m6A
Genomic Coordinates	12:52055755:+	12:52056076:+	12:52056736:+
Level of Experimental Evidence	3	3	3
Level of Experimental Reliability	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	3kRDPWwiRCgi L6w2k2VEv4EY	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Yfn77uLS5tv8	3TeAZFYFxgvp 6UuHp6YApVKv jNkxUQNx8GRd NjZ8bGGJsNSR Q36pf44ZRvxu UN3tNpbCPHYf