General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000520064
Gene ID:	ENSG00000161813
Gene Name:	LARP4
Sequence (UNICHARACTER ENCODING)	GAAGUGAAAGGUUUGUUCAAAAGUGAAAACUGCCCCAAAGUGAUAAGCUGUGAGUUUGCACACAAUAGCAACUGGUAUAUCACUUUCCAGUCAGACACAGAUGCACAACAGGCUUUUAAAUACUUAAGAGAAGAAGUUAAAACAUUUCAGGGCAAGCCAAUUAUGGCAAGGAUAAAAGCCAUCAAUACAUUUUUUGCUAAGAAUGGUUAUCGAUUAAUGGAUUCUAGUAUCUAUAGUCACCCCAUUCAAACUCAAGCACAGUAUGCCUCCCCAGUCUUUAUGCAGCCUGUAUAUAAUCCUCACCAACAGUACUCGGUCUAUAGUAUUGUGCCUCAGUCUUGGUCUCCAAAUCCUACACCUUACUUUGAAACACCACUGGCUCCCUUUCCCAAUGGUAGUUUUGUGAAUGGCUUUAAUUCGCCAGGAUCUUAUAAAACAAAUGCUGCUGCUAUGAAUAUGGGUCGACCAUUCCAAAAAAAUCGUGUGAAGCCUCAGUUUAGGUCAUCUGGUGGUUCAGAACACUCAACAGAGGGCUCUGUAUCCUUGGGGGAUGGACAGUUGAACAGAUAUAGUUCAAGAAACUUUCCAGCUGAACGGCAUAACCCCACAGUAACUGGGCAUCAGGAGCAAACUUACCUUCAGAAGGAGACUUCCACUUUGCAGGUGGAACAGAAUGGGGACUAUGGUAGGGGCAGGAGAACUCUCUUCAGAGGUCGAAGACGACGAGAAGAUGACAGGAUCUCAAGACCUCAUCCUUCAACAGCUGAAUCAAAGGCUCCAACACCAAAGUUUGACUUAUUAGCCUCAAAUUUUCCACCUUUACCUGGAAGUUCAUCAAGAAUGCCAGGUGAACUCGUUUUGGAGAAUAGGAUGUCUGAUGUUGUUAAAGGUGUCUACAAAGAAAAGGAUAAUGAAGAGUUGACAAUUAGUUGCCCAGUGCCUGCAGAUGAGCAGACAGAAUGCACUUCUGCCCAGCAACUCAAUAUGAGUACCAGUUCUCCAUGUGCUGCUGAGCUUACUGCAUUAAGCACAACUCAGCAAGAAAAGGAUCUAAUAGAAGAUUCCUCUGUUCAGAAGGAUGGUCUCAAUCAGACAACUAUACCAGUUUCUCCUCCAAGUACUACAAAGCCAUCGAGGGAACCCCGAAAGUUAAGUUAUGCUGAAGUGUGCCAGAAGCCCCCUAAAGAGCCAUCUUCAGUUCUUGUGCAGCCACUACGGGAACUUCGCUCCAAUGUGGUGUCUCCCACCAAAAAUGAAGACAAUGGAGCUCCUGAGAЖCUCCGUUGAGAAACCACAUGAGAAGCCAGAAGCAAGGGCUAGUAAGGAUUAUUCUGGCUUCCGAGGCAAUAUAAUCCCCAGGGGAGCAGCAGGAAAAAUCAGGGAACAGAGЖCGCCAGUUUAGCCAUAGGGCUAUACCUCAGGGAGUGЖCUCGACGUAAUGGCAAAGAGCAAUAUGUGCCACCCAGAUCACCAAAGUAAAAAACAACAAAACUAUUCAAAAACUUCACUCUCUUCCCAUUAAACUUGAЖCUGUGGCUAUAUUGAЖCUGUUUUGGAGGGGAGGGGGUAGCCAGGAAGGAAACAAGAGAAAGUACGUCCAUUUCAUUAUGGAUUUUGGAGUUGUGAGUGAUAGGAUCCCAAAAUUCAUCUCUAAUGUGGUUUUUAAAUGCUGGAGGAUUCCAAUCAAUAUAAAUAUAUAUAUAUAUAUACACACACAUAUAUAAAAAGUAUAAUUUUUCUAUUUUUGUUUUUGGUUUUAAUUUGCAGAGAUPUGCUGCCAGGAAUCAAUUUUGAGGGUUCAGAUUUAGCUUGGAAGAAAAAAAAGAAACAUACAPCCUUCAGUAUAGGAGAUGAGGGAAUGAGAGAAAAUAUUUUUUGAAGAAGCAUUUCUGUAAAAUUAGAAAUUACUUUUUUUAAUCUAUUUAAAGUUUGGCUUGAAGAAUGCCAUCUCUGACUAUAUGGCCUUGUAUUGCAAAGCGGAUCAGUGGCUGGGGUGCCUGUUGUGGGUGUGAGUGUGUACAAGAGCGAUUGAAGCCAAAUCUGUUGUCAUGUUAGUAAAUGAUUUGAAAACUG
Sequence (SHORT NAMES ENCODING)	GAAGUGAAAGGUUUGUUCAAAAGUGAAAACUGCCCCAAAGUGAUAAGCUGUGAGUUUGCACACAAUAGCAACUGGUAUAUCACUUUCCAGUCAGACACAGAUGCACAACAGGCUUUUAAAUACUUAAGAGAAGAAGUUAAAACAUUUCAGGGCAAGCCAAUUAUGGCAAGGAUAAAAGCCAUCAAUACAUUUUUUGCUAAGAAUGGUUAUCGAUUAAUGGAUUCUAGUAUCUAUAGUCACCCCAUUCAAACUCAAGCACAGUAUGCCUCCCCAGUCUUUAUGCAGCCUGUAUAUAAUCCUCACCAACAGUACUCGGUCUAUAGUAUUGUGCCUCAGUCUUGGUCUCCAAAUCCUACACCUUACUUUGAAACACCACUGGCUCCCUUUCCCAAUGGUAGUUUUGUGAAUGGCUUUAAUUCGCCAGGAUCUUAUAAAACAAAUGCUGCUGCUAUGAAUAUGGGUCGACCAUUCCAAAAAAAUCGUGUGAAGCCUCAGUUUAGGUCAUCUGGUGGUUCAGAACACUCAACAGAGGGCUCUGUAUCCUUGGGGGAUGGACAGUUGAACAGAUAUAGUUCAAGAAACUUUCCAGCUGAACGGCAUAACCCCACAGUAACUGGGCAUCAGGAGCAAACUUACCUUCAGAAGGAGACUUCCACUUUGCAGGUGGAACAGAAUGGGGACUAUGGUAGGGGCAGGAGAACUCUCUUCAGAGGUCGAAGACGACGAGAAGAUGACAGGAUCUCAAGACCUCAUCCUUCAACAGCUGAAUCAAAGGCUCCAACACCAAAGUUUGACUUAUUAGCCUCAAAUUUUCCACCUUUACCUGGAAGUUCAUCAAGAAUGCCAGGUGAACUCGUUUUGGAGAAUAGGAUGUCUGAUGUUGUUAAAGGUGUCUACAAAGAAAAGGAUAAUGAAGAGUUGACAAUUAGUUGCCCAGUGCCUGCAGAUGAGCAGACAGAAUGCACUUCUGCCCAGCAACUCAAUAUGAGUACCAGUUCUCCAUGUGCUGCUGAGCUUACUGCAUUAAGCACAACUCAGCAAGAAAAGGAUCUAAUAGAAGAUUCCUCUGUUCAGAAGGAUGGUCUCAAUCAGACAACUAUACCAGUUUCUCCUCCAAGUACUACAAAGCCAUCGAGGGAACCCCGAAAGUUAAGUUAUGCUGAAGUGUGCCAGAAGCCCCCUAAAGAGCCAUCUUCAGUUCUUGUGCAGCCACUACGGGAACUUCGCUCCAAUGUGGUGUCUCCCACCAAAAAUGAAGACAAUGGAGCUCCUGAGAm6ACUCCGUUGAGAAACCACAUGAGAAGCCAGAAGCAAGGGCUAGUAAGGAUUAUUCUGGCUUCCGAGGCAAUAUAAUCCCCAGGGGAGCAGCAGGAAAAAUCAGGGAACAGAGm6ACGCCAGUUUAGCCAUAGGGCUAUACCUCAGGGAGUGm6ACUCGACGUAAUGGCAAAGAGCAAUAUGUGCCACCCAGAUCACCAAAGUAAAAAACAACAAAACUAUUCAAAAACUUCACUCUCUUCCCAUUAAACUUGAm6ACUGUGGCUAUAUUGAm6ACUGUUUUGGAGGGGAGGGGGUAGCCAGGAAGGAAACAAGAGAAAGUACGUCCAUUUCAUUAUGGAUUUUGGAGUUGUGAGUGAUAGGAUCCCAAAAUUCAUCUCUAAUGUGGUUUUUAAAUGCUGGAGGAUUCCAAUCAAUAUAAAUAUAUAUAUAUAUAUACACACACAUAUAUAAAAAGUAUAAUUUUUCUAUUUUUGUUUUUGGUUUUAAUUUGCAGAGAUYUGCUGCCAGGAAUCAAUUUUGAGGGUUCAGAUUUAGCUUGGAAGAAAAAAAAGAAACAUACAYCCUUCAGUAUAGGAGAUGAGGGAAUGAGAGAAAAUAUUUUUUGAAGAAGCAUUUCUGUAAAAUUAGAAAUUACUUUUUUUAAUCUAUUUAAAGUUUGGCUUGAAGAAUGCCAUCUCUGACUAUAUGGCCUUGUAUUGCAAAGCGGAUCAGUGGCUGGGGUGCCUGUUGUGGGUGUGAGUGUGUACAAGAGCGAUUGAAGCCAAAUCUGUUGUCAUGUUAGUAAAUGAUUUGAAAACUG
Sequence (MODOMICS CODE ENCODING)	GAAGUGAAAGGUUUGUUCAAAAGUGAAAACUGCCCCAAAGUGAUAAGCUGUGAGUUUGCACACAAUAGCAACUGGUAUAUCACUUUCCAGUCAGACACAGAUGCACAACAGGCUUUUAAAUACUUAAGAGAAGAAGUUAAAACAUUUCAGGGCAAGCCAAUUAUGGCAAGGAUAAAAGCCAUCAAUACAUUUUUUGCUAAGAAUGGUUAUCGAUUAAUGGAUUCUAGUAUCUAUAGUCACCCCAUUCAAACUCAAGCACAGUAUGCCUCCCCAGUCUUUAUGCAGCCUGUAUAUAAUCCUCACCAACAGUACUCGGUCUAUAGUAUUGUGCCUCAGUCUUGGUCUCCAAAUCCUACACCUUACUUUGAAACACCACUGGCUCCCUUUCCCAAUGGUAGUUUUGUGAAUGGCUUUAAUUCGCCAGGAUCUUAUAAAACAAAUGCUGCUGCUAUGAAUAUGGGUCGACCAUUCCAAAAAAAUCGUGUGAAGCCUCAGUUUAGGUCAUCUGGUGGUUCAGAACACUCAACAGAGGGCUCUGUAUCCUUGGGGGAUGGACAGUUGAACAGAUAUAGUUCAAGAAACUUUCCAGCUGAACGGCAUAACCCCACAGUAACUGGGCAUCAGGAGCAAACUUACCUUCAGAAGGAGACUUCCACUUUGCAGGUGGAACAGAAUGGGGACUAUGGUAGGGGCAGGAGAACUCUCUUCAGAGGUCGAAGACGACGAGAAGAUGACAGGAUCUCAAGACCUCAUCCUUCAACAGCUGAAUCAAAGGCUCCAACACCAAAGUUUGACUUAUUAGCCUCAAAUUUUCCACCUUUACCUGGAAGUUCAUCAAGAAUGCCAGGUGAACUCGUUUUGGAGAAUAGGAUGUCUGAUGUUGUUAAAGGUGUCUACAAAGAAAAGGAUAAUGAAGAGUUGACAAUUAGUUGCCCAGUGCCUGCAGAUGAGCAGACAGAAUGCACUUCUGCCCAGCAACUCAAUAUGAGUACCAGUUCUCCAUGUGCUGCUGAGCUUACUGCAUUAAGCACAACUCAGCAAGAAAAGGAUCUAAUAGAAGAUUCCUCUGUUCAGAAGGAUGGUCUCAAUCAGACAACUAUACCAGUUUCUCCUCCAAGUACUACAAAGCCAUCGAGGGAACCCCGAAAGUUAAGUUAUGCUGAAGUGUGCCAGAAGCCCCCUAAAGAGCCAUCUUCAGUUCUUGUGCAGCCACUACGGGAACUUCGCUCCAAUGUGGUGUCUCCCACCAAAAAUGAAGACAAUGGAGCUCCUGAGA2000000006ACUCCGUUGAGAAACCACAUGAGAAGCCAGAAGCAAGGGCUAGUAAGGAUUAUUCUGGCUUCCGAGGCAAUAUAAUCCCCAGGGGAGCAGCAGGAAAAAUCAGGGAACAGAG2000000006ACGCCAGUUUAGCCAUAGGGCUAUACCUCAGGGAGUG2000000006ACUCGACGUAAUGGCAAAGAGCAAUAUGUGCCACCCAGAUCACCAAAGUAAAAAACAACAAAACUAUUCAAAAACUUCACUCUCUUCCCAUUAAACUUGA2000000006ACUGUGGCUAUAUUGA2000000006ACUGUUUUGGAGGGGAGGGGGUAGCCAGGAAGGAAACAAGAGAAAGUACGUCCAUUUCAUUAUGGAUUUUGGAGUUGUGAGUGAUAGGAUCCCAAAAUUCAUCUCUAAUGUGGUUUUUAAAUGCUGGAGGAUUCCAAUCAAUAUAAAUAUAUAUAUAUAUAUACACACACAUAUAUAAAAAGUAUAAUUUUUCUAUUUUUGUUUUUGGUUUUAAUUUGCAGAGAU2000000009UUGCUGCCAGGAAUCAAUUUUGAGGGUUCAGAUUUAGCUUGGAAGAAAAAAAAGAAACAUACA2000000009UCCUUCAGUAUAGGAGAUGAGGGAAUGAGAGAAAAUAUUUUUUGAAGAAGCAUUUCUGUAAAAUUAGAAAUUACUUUUUUUAAUCUAUUUAAAGUUUGGCUUGAAGAAUGCCAUCUCUGACUAUAUGGCCUUGUAUUGCAAAGCGGAUCAGUGGCUGGGGUGCCUGUUGUGGGUGUGAGUGUGUACAAGAGCGAUUGAAGCCAAAUCUGUUGUCAUGUUAGUAAAUGAUUUGAAAACUG

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	1277	1389	1426	1526	1542	1767	1830
Modification Positions	m6A	m6A	m6A	m6A	m6A	Y	Y
Genomic Coordinates	12:50475665:+	12:50475777:+	12:50475814:+	12:50475914:+	12:50475930:+	12:50476155:+	12:50476218:+
Level of Experimental Evidence	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	3TeAZFYFxgvp 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 8cMbzB4aD5Se Lny8GcCeVGc9 XUkp6ghERQML dknfVe6BK8aP	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U D6ncpa2PPWj3 Lny8GcCeVGc9	3TeAZFYFxgvp 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 93arJtwJmuS9 Lny8GcCeVGc9 dknfVe6BK8aP	5FhTyQVy2tKW msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U D6ncpa2PPWj3 Lny8GcCeVGc9 UKen6WEino9G dknfVe6BK8aP	msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 UKen6WEino9G dknfVe6BK8aP	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP	BtsJQJ3DteUq dknfVe6BK8aP