General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000417507
Gene ID:	ENSG00000185480
Gene Name:	PARPBP
Sequence (UNICHARACTER ENCODING)	GCAGACUCCAUGCUCUUGGCAUUGCAGCUUUCUAUGGCGGAGAACAACAAЖCAGCACAGUGGAGAAUUUACAGUCUCUCUCAGUGAUGUUUUAUUGACAUGGAAAUACUUGCUCCAUGAGAAAUUGAЖCUUACCAGUUGAAAACAUGGACGUGACUGACCAUUAUGAGGACGUUAGGAAGAUUUAUGAUGAUUUCUUGAAGAACAGUAAUAUGUUAGAUCUGAUUGAUGUUUAUCAAAAAUGUAGGGCUUUGACUUCUAAUUGUGAAAAUUAUAACACAGUAUCUCCUAGUCAACUACUGGAUUUUCUGUCUGGCAAACAGUAUGCAGUAGGUGAUGAAACUGAUCUUUCUAUACCAACAUCACCAACAAGUAAAUACAACCGUGAUAAUGAAAAGGUGCAGCUGCUAGCAAGGAAAAUUAUCUUUUCAUAUUUAAAUCUGCUAGUGAAUUCAAAGAAUGACCUGGCUGUGGCUUAUAUUCUCAAUAUUCCUGAUAGAGGACUAGGAAGAGAAGCCUUCACUGAUUUGAAACAUGCUGCUCGAGAGAAACAAAUGUCUAUCUUUUUGGUGGCCACGUCUUUUAUUAGAACAAUAGAGCUUGGAGGGAAAGGAUAUGCACCACCACCAUCAGAUCCUPUAAGGACACAUGUAAAGGGAUUGUCUAAUUUUAUUAAUUUCAUUGACAAAUUAGAUGAGAUUCUUGGAGAAAUACCAAACCCAAGGUCUCCCACACAGGUGAAUAAUUCGAUAAAACCCCUAAGAGAACGCAUCUGUGUGUCAAUGCAAGAGAAAAAAAUUAAGAGGGUGUAAAUCCAUCUGUUGGAAGAUCAACAAUUGGAACGAGUUUUGGAAAUGUUCAUCUGGACAGAAGUAAAAAUGAAAAAGUAUCAAGAAAAUCAACCAGUCAGACAGGAAAUAAAAGCUCAAAAAGGAAACAGGUGGAUUUGGAUGGUGAAAAUAUUCUCUGUGAUAAUAGAAAUGAЖCCACCUCAACAUAAAAAUGCUAAAAUACCUAAGAAAUCAAAUGAUUCACAGAAUAGAUUGUACGGCAAЖCUAGCUAAAGUAGCAAAAAGUAAUAAAUGUACUGCCAAGGACAAGUUGAUUUCUGGCCAGGCAAAGUUAЖCUCAGUUUUUUAGACUAUAAAUUUGUGUCUUAUAUGCUPUAGGUUUAUGUAUCUAUAAACCAUUCACCAAAGACAUGCUUAAUUUUUAAGAGAUCAAGGUGUAAAUUAUGAUGAUUUAUUAUUUUGGUCUACAGUGUAUGUAAGGUUAGUAUGUUAAGCAUUGUUUAAAAAUACUAGUAAGUCAUAAUUAUGCAGAAUUUUCACAAAGUUUAAUGCACAGAGAAAGCAUAUCAUUUCAGUUACUGAUACAUCUUAЖCACUACUUUCUUUUAAAACAGACAUUUAЖCAUACACAAGUUAUAGUAGCAGUAUGGGCUUCUCCPCCCAUUGGCAAUUAAAUGCUUUUAUUUUCUUCUGAAAAGAUGAUGUGGACCAACAGGUAUCAGACUUGCCAACAAGGUCGGUAGACUCUUCCCAGCAUACAUCUGAGCACUGAAGGAAGAAGAAAGUUUAAAUUGUUUAAAGGЖCUAUAAUUAUCACACAAAAUUUAUUAAGAAAAAAAGAAUGGAUCUAGUAUAACUAAUUCUGAGUAAACCAAAAUGAUAAUAAUUAAUUGUUGCUAUUUAAUCCCACAUUUUUGGCAGGUGUAAUUGAGCCAUGGUCUUAUUUGAUUUUGUUAUGAUUGCAPCCAAAUUCACUPUAACUCAGAGUUCUGUUUAAUGGUGGUAGGAUGUAAGAAUUGAAUUUUGAAAAGACUACUCACUGUCAAAAUCUCUCCUUCCUAUAGGAAAUUUAGCUGAGUUUUCUUCAUCCCCAAUUUCUCUCUUUUCUUGUGUUGAUUCAGUAUUCUGAACUCCAUUCUCAGCUGGGAAAGCUACAGAUCCUUUUAGUGCAAGAUAAGGUUUUAUAGCCAGAUUCAGUGGCAGACCAUGAUUUAAGAAAUUAUGUUUGGAGCCUGUGUUCUGUAAAGAGAAGGUUGAUPUGGUUUUUAGCUAUCGUAUUCGGAGUGGAACUAUAAUACAAUUGUAUAAUAUUCUUGUUGAUCAAUUCAAAGUUACUCUGCACUGUUUUUGACUUUUUAAAAAUACCUUAGAUGCAAAUUUAUAGGAGAAAAAACACUUUCAGAUAAGAGGUGUUUGCUGGGAUGGAAGA
Sequence (SHORT NAMES ENCODING)	GCAGACUCCAUGCUCUUGGCAUUGCAGCUUUCUAUGGCGGAGAACAACAAm6ACAGCACAGUGGAGAAUUUACAGUCUCUCUCAGUGAUGUUUUAUUGACAUGGAAAUACUUGCUCCAUGAGAAAUUGAm6ACUUACCAGUUGAAAACAUGGACGUGACUGACCAUUAUGAGGACGUUAGGAAGAUUUAUGAUGAUUUCUUGAAGAACAGUAAUAUGUUAGAUCUGAUUGAUGUUUAUCAAAAAUGUAGGGCUUUGACUUCUAAUUGUGAAAAUUAUAACACAGUAUCUCCUAGUCAACUACUGGAUUUUCUGUCUGGCAAACAGUAUGCAGUAGGUGAUGAAACUGAUCUUUCUAUACCAACAUCACCAACAAGUAAAUACAACCGUGAUAAUGAAAAGGUGCAGCUGCUAGCAAGGAAAAUUAUCUUUUCAUAUUUAAAUCUGCUAGUGAAUUCAAAGAAUGACCUGGCUGUGGCUUAUAUUCUCAAUAUUCCUGAUAGAGGACUAGGAAGAGAAGCCUUCACUGAUUUGAAACAUGCUGCUCGAGAGAAACAAAUGUCUAUCUUUUUGGUGGCCACGUCUUUUAUUAGAACAAUAGAGCUUGGAGGGAAAGGAUAUGCACCACCACCAUCAGAUCCUYUAAGGACACAUGUAAAGGGAUUGUCUAAUUUUAUUAAUUUCAUUGACAAAUUAGAUGAGAUUCUUGGAGAAAUACCAAACCCAAGGUCUCCCACACAGGUGAAUAAUUCGAUAAAACCCCUAAGAGAACGCAUCUGUGUGUCAAUGCAAGAGAAAAAAAUUAAGAGGGUGUAAAUCCAUCUGUUGGAAGAUCAACAAUUGGAACGAGUUUUGGAAAUGUUCAUCUGGACAGAAGUAAAAAUGAAAAAGUAUCAAGAAAAUCAACCAGUCAGACAGGAAAUAAAAGCUCAAAAAGGAAACAGGUGGAUUUGGAUGGUGAAAAUAUUCUCUGUGAUAAUAGAAAUGAm6ACCACCUCAACAUAAAAAUGCUAAAAUACCUAAGAAAUCAAAUGAUUCACAGAAUAGAUUGUACGGCAAm6ACUAGCUAAAGUAGCAAAAAGUAAUAAAUGUACUGCCAAGGACAAGUUGAUUUCUGGCCAGGCAAAGUUAm6ACUCAGUUUUUUAGACUAUAAAUUUGUGUCUUAUAUGCUYUAGGUUUAUGUAUCUAUAAACCAUUCACCAAAGACAUGCUUAAUUUUUAAGAGAUCAAGGUGUAAAUUAUGAUGAUUUAUUAUUUUGGUCUACAGUGUAUGUAAGGUUAGUAUGUUAAGCAUUGUUUAAAAAUACUAGUAAGUCAUAAUUAUGCAGAAUUUUCACAAAGUUUAAUGCACAGAGAAAGCAUAUCAUUUCAGUUACUGAUACAUCUUAm6ACACUACUUUCUUUUAAAACAGACAUUUAm6ACAUACACAAGUUAUAGUAGCAGUAUGGGCUUCUCCYCCCAUUGGCAAUUAAAUGCUUUUAUUUUCUUCUGAAAAGAUGAUGUGGACCAACAGGUAUCAGACUUGCCAACAAGGUCGGUAGACUCUUCCCAGCAUACAUCUGAGCACUGAAGGAAGAAGAAAGUUUAAAUUGUUUAAAGGm6ACUAUAAUUAUCACACAAAAUUUAUUAAGAAAAAAAGAAUGGAUCUAGUAUAACUAAUUCUGAGUAAACCAAAAUGAUAAUAAUUAAUUGUUGCUAUUUAAUCCCACAUUUUUGGCAGGUGUAAUUGAGCCAUGGUCUUAUUUGAUUUUGUUAUGAUUGCAYCCAAAUUCACUYUAACUCAGAGUUCUGUUUAAUGGUGGUAGGAUGUAAGAAUUGAAUUUUGAAAAGACUACUCACUGUCAAAAUCUCUCCUUCCUAUAGGAAAUUUAGCUGAGUUUUCUUCAUCCCCAAUUUCUCUCUUUUCUUGUGUUGAUUCAGUAUUCUGAACUCCAUUCUCAGCUGGGAAAGCUACAGAUCCUUUUAGUGCAAGAUAAGGUUUUAUAGCCAGAUUCAGUGGCAGACCAUGAUUUAAGAAAUUAUGUUUGGAGCCUGUGUUCUGUAAAGAGAAGGUUGAUYUGGUUUUUAGCUAUCGUAUUCGGAGUGGAACUAUAAUACAAUUGUAUAAUAUUCUUGUUGAUCAAUUCAAAGUUACUCUGCACUGUUUUUGACUUUUUAAAAAUACCUUAGAUGCAAAUUUAUAGGAGAAAAAACACUUUCAGAUAAGAGGUGUUUGCUGGGAUGGAAGA
Sequence (MODOMICS CODE ENCODING)	GCAGACUCCAUGCUCUUGGCAUUGCAGCUUUCUAUGGCGGAGAACAACAA2000000006ACAGCACAGUGGAGAAUUUACAGUCUCUCUCAGUGAUGUUUUAUUGACAUGGAAAUACUUGCUCCAUGAGAAAUUGA2000000006ACUUACCAGUUGAAAACAUGGACGUGACUGACCAUUAUGAGGACGUUAGGAAGAUUUAUGAUGAUUUCUUGAAGAACAGUAAUAUGUUAGAUCUGAUUGAUGUUUAUCAAAAAUGUAGGGCUUUGACUUCUAAUUGUGAAAAUUAUAACACAGUAUCUCCUAGUCAACUACUGGAUUUUCUGUCUGGCAAACAGUAUGCAGUAGGUGAUGAAACUGAUCUUUCUAUACCAACAUCACCAACAAGUAAAUACAACCGUGAUAAUGAAAAGGUGCAGCUGCUAGCAAGGAAAAUUAUCUUUUCAUAUUUAAAUCUGCUAGUGAAUUCAAAGAAUGACCUGGCUGUGGCUUAUAUUCUCAAUAUUCCUGAUAGAGGACUAGGAAGAGAAGCCUUCACUGAUUUGAAACAUGCUGCUCGAGAGAAACAAAUGUCUAUCUUUUUGGUGGCCACGUCUUUUAUUAGAACAAUAGAGCUUGGAGGGAAAGGAUAUGCACCACCACCAUCAGAUCCU2000000009UUAAGGACACAUGUAAAGGGAUUGUCUAAUUUUAUUAAUUUCAUUGACAAAUUAGAUGAGAUUCUUGGAGAAAUACCAAACCCAAGGUCUCCCACACAGGUGAAUAAUUCGAUAAAACCCCUAAGAGAACGCAUCUGUGUGUCAAUGCAAGAGAAAAAAAUUAAGAGGGUGUAAAUCCAUCUGUUGGAAGAUCAACAAUUGGAACGAGUUUUGGAAAUGUUCAUCUGGACAGAAGUAAAAAUGAAAAAGUAUCAAGAAAAUCAACCAGUCAGACAGGAAAUAAAAGCUCAAAAAGGAAACAGGUGGAUUUGGAUGGUGAAAAUAUUCUCUGUGAUAAUAGAAAUGA2000000006ACCACCUCAACAUAAAAAUGCUAAAAUACCUAAGAAAUCAAAUGAUUCACAGAAUAGAUUGUACGGCAA2000000006ACUAGCUAAAGUAGCAAAAAGUAAUAAAUGUACUGCCAAGGACAAGUUGAUUUCUGGCCAGGCAAAGUUA2000000006ACUCAGUUUUUUAGACUAUAAAUUUGUGUCUUAUAUGCU2000000009UUAGGUUUAUGUAUCUAUAAACCAUUCACCAAAGACAUGCUUAAUUUUUAAGAGAUCAAGGUGUAAAUUAUGAUGAUUUAUUAUUUUGGUCUACAGUGUAUGUAAGGUUAGUAUGUUAAGCAUUGUUUAAAAAUACUAGUAAGUCAUAAUUAUGCAGAAUUUUCACAAAGUUUAAUGCACAGAGAAAGCAUAUCAUUUCAGUUACUGAUACAUCUUA2000000006ACACUACUUUCUUUUAAAACAGACAUUUA2000000006ACAUACACAAGUUAUAGUAGCAGUAUGGGCUUCUCC2000000009UCCCAUUGGCAAUUAAAUGCUUUUAUUUUCUUCUGAAAAGAUGAUGUGGACCAACAGGUAUCAGACUUGCCAACAAGGUCGGUAGACUCUUCCCAGCAUACAUCUGAGCACUGAAGGAAGAAGAAAGUUUAAAUUGUUUAAAGG2000000006ACUAUAAUUAUCACACAAAAUUUAUUAAGAAAAAAAGAAUGGAUCUAGUAUAACUAAUUCUGAGUAAACCAAAAUGAUAAUAAUUAAUUGUUGCUAUUUAAUCCCACAUUUUUGGCAGGUGUAAUUGAGCCAUGGUCUUAUUUGAUUUUGUUAUGAUUGCA2000000009UCCAAAUUCACU2000000009UUAACUCAGAGUUCUGUUUAAUGGUGGUAGGAUGUAAGAAUUGAAUUUUGAAAAGACUACUCACUGUCAAAAUCUCUCCUUCCUAUAGGAAAUUUAGCUGAGUUUUCUUCAUCCCCAAUUUCUCUCUUUUCUUGUGUUGAUUCAGUAUUCUGAACUCCAUUCUCAGCUGGGAAAGCUACAGAUCCUUUUAGUGCAAGAUAAGGUUUUAUAGCCAGAUUCAGUGGCAGACCAUGAUUUAAGAAAUUAUGUUUGGAGCCUGUGUUCUGUAAAGAGAAGGUUGAU2000000009UUGGUUUUUAGCUAUCGUAUUCGGAGUGGAACUAUAAUACAAUUGUAUAAUAUUCUUGUUGAUCAAUUCAAAGUUACUCUGCACUGUUUUUGACUUUUUAAAAAUACCUUAGAUGCAAAUUUAUAGGAGAAAAAACACUUUCAGAUAAGAGGUGUUUGCUGGGAUGGAAGA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	51	128	637	983	1052	1122	1161	1378	1407	1443	1587	1748	1760	2042
Modification Positions	m6A	m6A	Y	m6A	m6A	m6A	Y	m6A	m6A	Y	m6A	Y	Y	Y
Genomic Coordinates	12:102124038:+	12:102148303:+	12:102165798:+	12:102196132:+	12:102196201:+	12:102196271:+	12:102196310:+	12:102196527:+	12:102196556:+	12:102196592:+	12:102196736:+	12:102196897:+	12:102196909:+	12:102197191:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq bXBqJigD9oV3 f6YSioLdAWpr	4HMi5ykupT9V 5aTkEfEpX8Xm jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BsCW7emuRX7M Lny8GcCeVGc9 LZJKems7W2wi BtsJQJ3DteUq bXBqJigD9oV3 f6YSioLdAWpr	BtsJQJ3DteUq bXBqJigD9oV3 f6YSioLdAWpr	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8