General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000546893
Gene ID:	ENSG00000111371
Gene Name:	SLC38A1
Sequence (UNICHARACTER ENCODING)	GCAUCGUCAGAGAGCUGCAAGAGGGAGGCAGCAAGGUGCGGCCGCCAGCAGUGACACCAUGUGACCGGCACGGCUCACUGACACGCAGCUUUGGUUAAAGAGCGGGCGCACAGGAGGGGAGGAGACCGCGCGCGGGACGGGGAGGAAUGGCCUGUCCGCGUUAAACCAUCACAAGCCAUGGUUGCGGAAGGGCCACGCGUCCCCCAGUAGGAGAAUGACUCCGAUUCGUGACCCUCAGCGCCGGUGCAUGUCGAUAUAUUUAUUGAGUGUCUACUGUGUGCCAGGCACUAUAUCUAUGUGCAUAGAAAAACCCUGGAAGGCCAUACЖACAAUAUAUAUAGAGUGAUCGUCUCUGCUUGCUGAGCUAACAGGGGUGUCAAGCUUCCAUUUUGGUAUCUACUUCUAAAUACACUCAGAACAGGAGAAAUUUGGACUAAUUUUCAAACUACAGACACUUUCUAAUCAUGAUGCAUUUCAAAAGUGGACUCGAAUUAACUGAGUUGCAAAACAUGACAGUGCCCGAGGAUGAUAACAUUAGCAAUGACUCCAAUGAUUUCACCGAAGUAGAAAAUGGUCAGAUAAAUAGCAAGUUUAUUUCUGAUCGUGAAAGUAGAAGAAGUCUCACAAACAGCCAUUUGGAAAAAAAGAAGUGUGAUGAGUAUAUUCCAGGUACAACCUCCUUAGGCAUGUCUGUUUUUAACCUAAGCAACGCCAUUAUGGGCAGUGGGAUUUUGGGACUCGCCUUUGCCCUGGCAAACACUGGAAUCCUACUUUUUCUGGUACUUUUGACUUCAGUGACAUUGCUGUCUAUAUAUUCAAUAAACCUCCUAUUGAUCUGUUCAAAAGAAACAGGCUGCAUGGUGUAUGAAAAGCUGGGGGAACAAGUCUUUGGCACCACAGGGAAGUUCGUAAUCUUUGGAGCCACCUCUCUACAGAACACUGGAGCAAUGCUGAGCUACCUCUUCAUCGUAAAAAAUGAACUACCCUCUGCCAUAAAGUUUCUAAUGGGAAAGGAAGAGACAUUUUCAGCCUGGUACGUGGAUGGCCGCGUUCUGGUGGUGAUAGUUACCUUUGGCAUAAUUCUCCCUCUGUGUCUCUUGAAGAACUUAGGGUAUCUUGGCUAUACUAGUGGAUUUUCCUUGAGCUGUAUGGUUUUUUUCCUAAUUGUGGUUAUUUACAAGAAAUUUCAAAUUCCCUGCAUUGUUCCAGAGCUAAAUUCAACAAUAAGUGCUAAUUCAACAAAUGCUGACACGUGUACGCCAAAAUAUGUUACCUUCAAUUCAAAGACCGUGUAUGCUPUACCCACCAUUGCAUUUGCAUUUGUUUGCCACCCGUCAGUCCUGCCAAUUUACЖGUGAGCUUAAAGACCGAUCACAGAAAAAAAUGCAGAUGGUUUCAAACAUCUCCUUUUUCGCCAUGUUUGUUAUGUACUUCUUGACUGCCAUUUUUGGCUACUUGACAUUCUAUGACAACGUGCAGUCCGACCUCCUUCACAAAUAUCAGAGUAAAGAUGACAUUCUCAPCCUGACAGUGCGGCUGGCUGUCAUUGUUGCUGUGAUCCUCACAGUGCCGGUGUUAUUUUUCACGGUUCGUUCAUCUPUAUUUGAACUGGCUAAGAAAACAAAGUUUAAUUUAUGUCGUCAUACCGUGGUUACCUGCAUACUCUUGGUUGUUAUCAACUUGUUGGUGAUCUUCAUACCCUCCAUGAAGGAUAUUUUUGGAGUCGUAGGAGUUACAUCUGCUAACAUGCUUAUUUUCAUUCUUCCUUCAUCUCUPUAUUUAAAAAUCACAGACCAGGAUGGAGAUAAAGGAACUCAAAGAAUUUGGGCUGCCCUUUUCUUGGGCCUGGGGGUGUUGUUCUCCUUGGUCAGCAUUCCCUUGGUCAUCUAUGACUGGGCCUGCUCAUCGAGUAGUGACGAAGGCCACUGAAACCCGCCGAGAAAAAGAAACAUCCCUGUUGUCUGCUCAGUCAAGUCCCCACACAUCAGCAAUCUCUCACCACUUCUUUUGCAAGUUUACЖGAAGCAAЖCAGAAAUGUACAGGAUACUUAAAAUGGAAUAЖCUUUUUGGUUGCAAAACAGAGЖCAUGGUUCUAUAAUGCUUCAUGUCCCUCCAAGAUUUGAGAUCAAUUUAGGGAUUGUGAAAUUUUUUUUUCAAAUUUCAUACAAUCAUAUUUCCCAGUACUUUUCACAAUCAUUUUUUACCCAUCUAЖCUCUAUGUUUUGUGGCUUCCCGGUCUCUUAGAЖCUUUGAAAACAUGAUAUACAAUAAUGUUUAUUUAUUAUACAPCCAGAUUCUGAAAUAAUUUUCCUACUGAUGUUCAGCUCACACUAUCUGUA
Sequence (SHORT NAMES ENCODING)	GCAUCGUCAGAGAGCUGCAAGAGGGAGGCAGCAAGGUGCGGCCGCCAGCAGUGACACCAUGUGACCGGCACGGCUCACUGACACGCAGCUUUGGUUAAAGAGCGGGCGCACAGGAGGGGAGGAGACCGCGCGCGGGACGGGGAGGAAUGGCCUGUCCGCGUUAAACCAUCACAAGCCAUGGUUGCGGAAGGGCCACGCGUCCCCCAGUAGGAGAAUGACUCCGAUUCGUGACCCUCAGCGCCGGUGCAUGUCGAUAUAUUUAUUGAGUGUCUACUGUGUGCCAGGCACUAUAUCUAUGUGCAUAGAAAAACCCUGGAAGGCCAUACm6AACAAUAUAUAUAGAGUGAUCGUCUCUGCUUGCUGAGCUAACAGGGGUGUCAAGCUUCCAUUUUGGUAUCUACUUCUAAAUACACUCAGAACAGGAGAAAUUUGGACUAAUUUUCAAACUACAGACACUUUCUAAUCAUGAUGCAUUUCAAAAGUGGACUCGAAUUAACUGAGUUGCAAAACAUGACAGUGCCCGAGGAUGAUAACAUUAGCAAUGACUCCAAUGAUUUCACCGAAGUAGAAAAUGGUCAGAUAAAUAGCAAGUUUAUUUCUGAUCGUGAAAGUAGAAGAAGUCUCACAAACAGCCAUUUGGAAAAAAAGAAGUGUGAUGAGUAUAUUCCAGGUACAACCUCCUUAGGCAUGUCUGUUUUUAACCUAAGCAACGCCAUUAUGGGCAGUGGGAUUUUGGGACUCGCCUUUGCCCUGGCAAACACUGGAAUCCUACUUUUUCUGGUACUUUUGACUUCAGUGACAUUGCUGUCUAUAUAUUCAAUAAACCUCCUAUUGAUCUGUUCAAAAGAAACAGGCUGCAUGGUGUAUGAAAAGCUGGGGGAACAAGUCUUUGGCACCACAGGGAAGUUCGUAAUCUUUGGAGCCACCUCUCUACAGAACACUGGAGCAAUGCUGAGCUACCUCUUCAUCGUAAAAAAUGAACUACCCUCUGCCAUAAAGUUUCUAAUGGGAAAGGAAGAGACAUUUUCAGCCUGGUACGUGGAUGGCCGCGUUCUGGUGGUGAUAGUUACCUUUGGCAUAAUUCUCCCUCUGUGUCUCUUGAAGAACUUAGGGUAUCUUGGCUAUACUAGUGGAUUUUCCUUGAGCUGUAUGGUUUUUUUCCUAAUUGUGGUUAUUUACAAGAAAUUUCAAAUUCCCUGCAUUGUUCCAGAGCUAAAUUCAACAAUAAGUGCUAAUUCAACAAAUGCUGACACGUGUACGCCAAAAUAUGUUACCUUCAAUUCAAAGACCGUGUAUGCUYUACCCACCAUUGCAUUUGCAUUUGUUUGCCACCCGUCAGUCCUGCCAAUUUACm6AGUGAGCUUAAAGACCGAUCACAGAAAAAAAUGCAGAUGGUUUCAAACAUCUCCUUUUUCGCCAUGUUUGUUAUGUACUUCUUGACUGCCAUUUUUGGCUACUUGACAUUCUAUGACAACGUGCAGUCCGACCUCCUUCACAAAUAUCAGAGUAAAGAUGACAUUCUCAYCCUGACAGUGCGGCUGGCUGUCAUUGUUGCUGUGAUCCUCACAGUGCCGGUGUUAUUUUUCACGGUUCGUUCAUCUYUAUUUGAACUGGCUAAGAAAACAAAGUUUAAUUUAUGUCGUCAUACCGUGGUUACCUGCAUACUCUUGGUUGUUAUCAACUUGUUGGUGAUCUUCAUACCCUCCAUGAAGGAUAUUUUUGGAGUCGUAGGAGUUACAUCUGCUAACAUGCUUAUUUUCAUUCUUCCUUCAUCUCUYUAUUUAAAAAUCACAGACCAGGAUGGAGAUAAAGGAACUCAAAGAAUUUGGGCUGCCCUUUUCUUGGGCCUGGGGGUGUUGUUCUCCUUGGUCAGCAUUCCCUUGGUCAUCUAUGACUGGGCCUGCUCAUCGAGUAGUGACGAAGGCCACUGAAACCCGCCGAGAAAAAGAAACAUCCCUGUUGUCUGCUCAGUCAAGUCCCCACACAUCAGCAAUCUCUCACCACUUCUUUUGCAAGUUUACm6AGAAGCAAm6ACAGAAAUGUACAGGAUACUUAAAAUGGAAUAm6ACUUUUUGGUUGCAAAACAGAGm6ACAUGGUUCUAUAAUGCUUCAUGUCCCUCCAAGAUUUGAGAUCAAUUUAGGGAUUGUGAAAUUUUUUUUUCAAAUUUCAUACAAUCAUAUUUCCCAGUACUUUUCACAAUCAUUUUUUACCCAUCUAm6ACUCUAUGUUUUGUGGCUUCCCGGUCUCUUAGAm6ACUUUGAAAACAUGAUAUACAAUAAUGUUUAUUUAUUAUACAYCCAGAUUCUGAAAUAAUUUUCCUACUGAUGUUCAGCUCACACUAUCUGUA
Sequence (MODOMICS CODE ENCODING)	GCAUCGUCAGAGAGCUGCAAGAGGGAGGCAGCAAGGUGCGGCCGCCAGCAGUGACACCAUGUGACCGGCACGGCUCACUGACACGCAGCUUUGGUUAAAGAGCGGGCGCACAGGAGGGGAGGAGACCGCGCGCGGGACGGGGAGGAAUGGCCUGUCCGCGUUAAACCAUCACAAGCCAUGGUUGCGGAAGGGCCACGCGUCCCCCAGUAGGAGAAUGACUCCGAUUCGUGACCCUCAGCGCCGGUGCAUGUCGAUAUAUUUAUUGAGUGUCUACUGUGUGCCAGGCACUAUAUCUAUGUGCAUAGAAAAACCCUGGAAGGCCAUAC2000000006AACAAUAUAUAUAGAGUGAUCGUCUCUGCUUGCUGAGCUAACAGGGGUGUCAAGCUUCCAUUUUGGUAUCUACUUCUAAAUACACUCAGAACAGGAGAAAUUUGGACUAAUUUUCAAACUACAGACACUUUCUAAUCAUGAUGCAUUUCAAAAGUGGACUCGAAUUAACUGAGUUGCAAAACAUGACAGUGCCCGAGGAUGAUAACAUUAGCAAUGACUCCAAUGAUUUCACCGAAGUAGAAAAUGGUCAGAUAAAUAGCAAGUUUAUUUCUGAUCGUGAAAGUAGAAGAAGUCUCACAAACAGCCAUUUGGAAAAAAAGAAGUGUGAUGAGUAUAUUCCAGGUACAACCUCCUUAGGCAUGUCUGUUUUUAACCUAAGCAACGCCAUUAUGGGCAGUGGGAUUUUGGGACUCGCCUUUGCCCUGGCAAACACUGGAAUCCUACUUUUUCUGGUACUUUUGACUUCAGUGACAUUGCUGUCUAUAUAUUCAAUAAACCUCCUAUUGAUCUGUUCAAAAGAAACAGGCUGCAUGGUGUAUGAAAAGCUGGGGGAACAAGUCUUUGGCACCACAGGGAAGUUCGUAAUCUUUGGAGCCACCUCUCUACAGAACACUGGAGCAAUGCUGAGCUACCUCUUCAUCGUAAAAAAUGAACUACCCUCUGCCAUAAAGUUUCUAAUGGGAAAGGAAGAGACAUUUUCAGCCUGGUACGUGGAUGGCCGCGUUCUGGUGGUGAUAGUUACCUUUGGCAUAAUUCUCCCUCUGUGUCUCUUGAAGAACUUAGGGUAUCUUGGCUAUACUAGUGGAUUUUCCUUGAGCUGUAUGGUUUUUUUCCUAAUUGUGGUUAUUUACAAGAAAUUUCAAAUUCCCUGCAUUGUUCCAGAGCUAAAUUCAACAAUAAGUGCUAAUUCAACAAAUGCUGACACGUGUACGCCAAAAUAUGUUACCUUCAAUUCAAAGACCGUGUAUGCU2000000009UUACCCACCAUUGCAUUUGCAUUUGUUUGCCACCCGUCAGUCCUGCCAAUUUAC2000000006AGUGAGCUUAAAGACCGAUCACAGAAAAAAAUGCAGAUGGUUUCAAACAUCUCCUUUUUCGCCAUGUUUGUUAUGUACUUCUUGACUGCCAUUUUUGGCUACUUGACAUUCUAUGACAACGUGCAGUCCGACCUCCUUCACAAAUAUCAGAGUAAAGAUGACAUUCUCA2000000009UCCUGACAGUGCGGCUGGCUGUCAUUGUUGCUGUGAUCCUCACAGUGCCGGUGUUAUUUUUCACGGUUCGUUCAUCU2000000009UUAUUUGAACUGGCUAAGAAAACAAAGUUUAAUUUAUGUCGUCAUACCGUGGUUACCUGCAUACUCUUGGUUGUUAUCAACUUGUUGGUGAUCUUCAUACCCUCCAUGAAGGAUAUUUUUGGAGUCGUAGGAGUUACAUCUGCUAACAUGCUUAUUUUCAUUCUUCCUUCAUCUCU2000000009UUAUUUAAAAAUCACAGACCAGGAUGGAGAUAAAGGAACUCAAAGAAUUUGGGCUGCCCUUUUCUUGGGCCUGGGGGUGUUGUUCUCCUUGGUCAGCAUUCCCUUGGUCAUCUAUGACUGGGCCUGCUCAUCGAGUAGUGACGAAGGCCACUGAAACCCGCCGAGAAAAAGAAACAUCCCUGUUGUCUGCUCAGUCAAGUCCCCACACAUCAGCAAUCUCUCACCACUUCUUUUGCAAGUUUAC2000000006AGAAGCAA2000000006ACAGAAAUGUACAGGAUACUUAAAAUGGAAUA2000000006ACUUUUUGGUUGCAAAACAGAG2000000006ACAUGGUUCUAUAAUGCUUCAUGUCCCUCCAAGAUUUGAGAUCAAUUUAGGGAUUGUGAAAUUUUUUUUUCAAAUUUCAUACAAUCAUAUUUCCCAGUACUUUUCACAAUCAUUUUUUACCCAUCUA2000000006ACUCUAUGUUUUGUGGCUUCCCGGUCUCUUAGA2000000006ACUUUGAAAACAUGAUAUACAAUAAUGUUUAUUUAUUAUACA2000000009UCCAGAUUCUGAAAUAAUUUUCCUACUGAUGUUCAGCUCACACUAUCUGUA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	327	1298	1352	1521	1598	1774	2018	2026	2058	2080	2207	2240	2282
Modification Positions	m6A	Y	m6A	Y	Y	Y	m6A	m6A	m6A	m6A	m6A	m6A	Y
Genomic Coordinates	12:46243243:-	12:46203077:-	12:46203023:-	12:46198689:-	12:46198048:-	12:46197771:-	12:46188879:-	12:46188871:-	12:46188839:-	12:46188817:-	12:46188690:-	12:46188657:-	12:46188615:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	3kRDPWwiRCgi L6w2k2VEv4EY	BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	3kRDPWwiRCgi L6w2k2VEv4EY	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Yfn77uLS5tv8	3kRDPWwiRCgi L6w2k2VEv4EY	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP iezFbUdmY3A6 Yfn77uLS5tv8	4HMi5ykupT9V 5aTkEfEpX8Xm jNkxUQNx8GRd msuJfBpJvM5H VyCX26p5UBRL WdHxkJGRmFxn BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP iezFbUdmY3A6 Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 6UuHp6YApVKv gBgcfFQ5WN9C jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR QmcpiJ88DBDn QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U D6ncpa2PPWj3 8cMbzB4aD5Se BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq dknfVe6BK8aP iezFbUdmY3A6 Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP iezFbUdmY3A6 Yfn77uLS5tv8	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn WiQcrNTGZHPT BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP iezFbUdmY3A6 Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP iezFbUdmY3A6 Yfn77uLS5tv8