General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000253233
Gene ID:	ENSG00000130921
Gene Name:	MTRFR
Sequence (UNICHARACTER ENCODING)	GCGUGCGCAGAUCAGGGAUCGCGAUUGCGAAUCCUCCGCUGAGGUGAUUUGGAUAUCCCUAGAACGUUGAGGGCACGAGUCGGGUCCUGAGACCAGGUCCUCAGCCAGCAGAGCCACGUUCCUUAUGAGCACCGUGGGUUUAUUUCAUUUUCCUACACCACUGACCCGAAUAUGCCCGGCGCCAUGGGGACUCCGGCUUUGGGAGAAGCUGACGUUGUUAUCCCCAGGAAUAGCUGUCACUCCGGUCCAGAUGGCAGGCAAGAAGGЖCUACCCUGCACUGCUUUCCUUGGAUGAGAAUGAЖCUCGAAGAGCAGUUUGUGAAAGGЖCACGGUCCAGGGGGCCAGGCAACCAACAAAACCAGCAACUGCGUGGUGCUGAAGCACAPCCCCUCAGGCAUCGUUGUAAAGUGCCAUCAGACAAGAUCAGUUGAUCAGAЖCAGAAAGCUAGCUCGGAAAAUCCUACAAGAGAAAGUAGAUGUUUUCUACAAUGGUGAAAACAGUCCUGUUCACAAAGAAAAACGAGAAGCGGCGAAGAAAAAACAAGAAAGGAAAAAAAGAGCAAAGGAAACCCUGGAAAAAAAGAAGCUACUUAAAGAЖCUGUGGGAGUCAAGUAAAAAGGUCCACUGAGAAAAGAAUUAGAGAUUCCAACUGACAGAAUCUGCCAGAAGCUCCCAGGGAAUAAUGGUGGCGAGUUCCAUCACCAGCAUUAUUAUAGUGCUUCAAAAGAAAUAUUUUUGAUGAЖCUUAAAAGЖCAACAAAUUUAUUUAAAUGGUGCACUAAЖCUGUAGUGAACAGAGЖCAUGCACGAUUCAAGAAUAAAЖCUCGGCUGGGCACGGUGGACGGUGCCUCACAUCUGUAAUCCCAGCACUUUGGGAGGCCGAGGCGGGCGGAUCACUUGAGGUCAGGAGUUUGAGACCAGCCUGGCCAACAUGGUGAAACCCCGUCUCUACUAAAAAUACAAAAAAUUAGCCAGGCAUGGUGGCGGGCACCUGUAAUCCCAGCUACUCGGGAGGCCGAGGCAGGAGAAUUGCGUGAACCUGGGAGGCGGAGGUUGCAGUGAGCUGAGAUCGCGCCACUGCACUCAAGCCUGGGCAACACCUGGGUGACAGAGCGAGACCCCAUCUCAAAAAAAAAAUAAAЖCUAGUUCAAGUGCAAUGACACACGCCUAUAAUCCCAGCACCUUGGGAGGCUAAGACAGGAAGAUCACCUGAGCCCAGGAGCUCAAGAUUGCAGUGAGCUAUGAACACCACUGCACUCCACCUGUCCACUUGUUCUUGUGUGACAGAЖCAAGACCCUGUCUCUAAAAAAUAAGAUAAAACCAUAAAGAAACACAGUCAGUACUAUACAAGAAUAAUGGCUACUUCUAGAGGGAAGGAGUUGUCAUUGUGAUGAGGCACUUGGAGGGGUUCUGGGGUGCCUGACAAAGUUCUGUUUCUUCACCUGGGUGGUAGUUAGAAGGGUGUCCCCGUAUUUCAAAUUGUACCUUUGUGAGAUUGUAUGUUUUGUAAUAAUAAAAUUUUUUUUGUAAUUAGUAAAGUCAAUUUUUAUGGAGAACUGGA
Sequence (SHORT NAMES ENCODING)	GCGUGCGCAGAUCAGGGAUCGCGAUUGCGAAUCCUCCGCUGAGGUGAUUUGGAUAUCCCUAGAACGUUGAGGGCACGAGUCGGGUCCUGAGACCAGGUCCUCAGCCAGCAGAGCCACGUUCCUUAUGAGCACCGUGGGUUUAUUUCAUUUUCCUACACCACUGACCCGAAUAUGCCCGGCGCCAUGGGGACUCCGGCUUUGGGAGAAGCUGACGUUGUUAUCCCCAGGAAUAGCUGUCACUCCGGUCCAGAUGGCAGGCAAGAAGGm6ACUACCCUGCACUGCUUUCCUUGGAUGAGAAUGAm6ACUCGAAGAGCAGUUUGUGAAAGGm6ACACGGUCCAGGGGGCCAGGCAACCAACAAAACCAGCAACUGCGUGGUGCUGAAGCACAYCCCCUCAGGCAUCGUUGUAAAGUGCCAUCAGACAAGAUCAGUUGAUCAGAm6ACAGAAAGCUAGCUCGGAAAAUCCUACAAGAGAAAGUAGAUGUUUUCUACAAUGGUGAAAACAGUCCUGUUCACAAAGAAAAACGAGAAGCGGCGAAGAAAAAACAAGAAAGGAAAAAAAGAGCAAAGGAAACCCUGGAAAAAAAGAAGCUACUUAAAGAm6ACUGUGGGAGUCAAGUAAAAAGGUCCACUGAGAAAAGAAUUAGAGAUUCCAACUGACAGAAUCUGCCAGAAGCUCCCAGGGAAUAAUGGUGGCGAGUUCCAUCACCAGCAUUAUUAUAGUGCUUCAAAAGAAAUAUUUUUGAUGAm6ACUUAAAAGm6ACAACAAAUUUAUUUAAAUGGUGCACUAAm6ACUGUAGUGAACAGAGm6ACAUGCACGAUUCAAGAAUAAAm6ACUCGGCUGGGCACGGUGGACGGUGCCUCACAUCUGUAAUCCCAGCACUUUGGGAGGCCGAGGCGGGCGGAUCACUUGAGGUCAGGAGUUUGAGACCAGCCUGGCCAACAUGGUGAAACCCCGUCUCUACUAAAAAUACAAAAAAUUAGCCAGGCAUGGUGGCGGGCACCUGUAAUCCCAGCUACUCGGGAGGCCGAGGCAGGAGAAUUGCGUGAACCUGGGAGGCGGAGGUUGCAGUGAGCUGAGAUCGCGCCACUGCACUCAAGCCUGGGCAACACCUGGGUGACAGAGCGAGACCCCAUCUCAAAAAAAAAAUAAAm6ACUAGUUCAAGUGCAAUGACACACGCCUAUAAUCCCAGCACCUUGGGAGGCUAAGACAGGAAGAUCACCUGAGCCCAGGAGCUCAAGAUUGCAGUGAGCUAUGAACACCACUGCACUCCACCUGUCCACUUGUUCUUGUGUGACAGAm6ACAAGACCCUGUCUCUAAAAAAUAAGAUAAAACCAUAAAGAAACACAGUCAGUACUAUACAAGAAUAAUGGCUACUUCUAGAGGGAAGGAGUUGUCAUUGUGAUGAGGCACUUGGAGGGGUUCUGGGGUGCCUGACAAAGUUCUGUUUCUUCACCUGGGUGGUAGUUAGAAGGGUGUCCCCGUAUUUCAAAUUGUACCUUUGUGAGAUUGUAUGUUUUGUAAUAAUAAAAUUUUUUUUGUAAUUAGUAAAGUCAAUUUUUAUGGAGAACUGGA
Sequence (MODOMICS CODE ENCODING)	GCGUGCGCAGAUCAGGGAUCGCGAUUGCGAAUCCUCCGCUGAGGUGAUUUGGAUAUCCCUAGAACGUUGAGGGCACGAGUCGGGUCCUGAGACCAGGUCCUCAGCCAGCAGAGCCACGUUCCUUAUGAGCACCGUGGGUUUAUUUCAUUUUCCUACACCACUGACCCGAAUAUGCCCGGCGCCAUGGGGACUCCGGCUUUGGGAGAAGCUGACGUUGUUAUCCCCAGGAAUAGCUGUCACUCCGGUCCAGAUGGCAGGCAAGAAGG2000000006ACUACCCUGCACUGCUUUCCUUGGAUGAGAAUGA2000000006ACUCGAAGAGCAGUUUGUGAAAGG2000000006ACACGGUCCAGGGGGCCAGGCAACCAACAAAACCAGCAACUGCGUGGUGCUGAAGCACA2000000009UCCCCUCAGGCAUCGUUGUAAAGUGCCAUCAGACAAGAUCAGUUGAUCAGA2000000006ACAGAAAGCUAGCUCGGAAAAUCCUACAAGAGAAAGUAGAUGUUUUCUACAAUGGUGAAAACAGUCCUGUUCACAAAGAAAAACGAGAAGCGGCGAAGAAAAAACAAGAAAGGAAAAAAAGAGCAAAGGAAACCCUGGAAAAAAAGAAGCUACUUAAAGA2000000006ACUGUGGGAGUCAAGUAAAAAGGUCCACUGAGAAAAGAAUUAGAGAUUCCAACUGACAGAAUCUGCCAGAAGCUCCCAGGGAAUAAUGGUGGCGAGUUCCAUCACCAGCAUUAUUAUAGUGCUUCAAAAGAAAUAUUUUUGAUGA2000000006ACUUAAAAG2000000006ACAACAAAUUUAUUUAAAUGGUGCACUAA2000000006ACUGUAGUGAACAGAG2000000006ACAUGCACGAUUCAAGAAUAAA2000000006ACUCGGCUGGGCACGGUGGACGGUGCCUCACAUCUGUAAUCCCAGCACUUUGGGAGGCCGAGGCGGGCGGAUCACUUGAGGUCAGGAGUUUGAGACCAGCCUGGCCAACAUGGUGAAACCCCGUCUCUACUAAAAAUACAAAAAAUUAGCCAGGCAUGGUGGCGGGCACCUGUAAUCCCAGCUACUCGGGAGGCCGAGGCAGGAGAAUUGCGUGAACCUGGGAGGCGGAGGUUGCAGUGAGCUGAGAUCGCGCCACUGCACUCAAGCCUGGGCAACACCUGGGUGACAGAGCGAGACCCCAUCUCAAAAAAAAAAUAAA2000000006ACUAGUUCAAGUGCAAUGACACACGCCUAUAAUCCCAGCACCUUGGGAGGCUAAGACAGGAAGAUCACCUGAGCCCAGGAGCUCAAGAUUGCAGUGAGCUAUGAACACCACUGCACUCCACCUGUCCACUUGUUCUUGUGUGACAGA2000000006ACAAGACCCUGUCUCUAAAAAAUAAGAUAAAACCAUAAAGAAACACAGUCAGUACUAUACAAGAAUAAUGGCUACUUCUAGAGGGAAGGAGUUGUCAUUGUGAUGAGGCACUUGGAGGGGUUCUGGGGUGCCUGACAAAGUUCUGUUUCUUCACCUGGGUGGUAGUUAGAAGGGUGUCCCCGUAUUUCAAAUUGUACCUUUGUGAGAUUGUAUGUUUUGUAAUAAUAAAAUUUUUUUUGUAAUUAGUAAAGUCAAUUUUUAUGGAGAACUGGA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	267	301	325	384	435	595	740	749	778	794	816	1135	1282
Modification Positions	m6A	m6A	m6A	Y	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A
Genomic Coordinates	12:123253817:+	12:123253851:+	12:123253875:+	12:123253934:+	12:123256841:+	12:123257001:+	12:123257146:+	12:123257155:+	12:123257184:+	12:123257200:+	12:123257222:+	12:123257541:+	12:123257688:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 Yfn77uLS5tv8	6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 Yfn77uLS5tv8	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6	BtsJQJ3DteUq bXBqJigD9oV3 oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 Yfn77uLS5tv8	WdHxkJGRmFxn BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 Yfn77uLS5tv8	msuJfBpJvM5H VyCX26p5UBRL WdHxkJGRmFxn BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Yfn77uLS5tv8	KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 PF5iqBNSbHaa UKen6WEino9G BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Yfn77uLS5tv8	4HMi5ykupT9V KENzb7mwdBd9 Lny8GcCeVGc9 PF5iqBNSbHaa BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Yfn77uLS5tv8	6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Yfn77uLS5tv8	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QpiKdbVikVz2 V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 93arJtwJmuS9 BkoLW2CBToyL Lny8GcCeVGc9 UKen6WEino9G BtsJQJ3DteUq Yfn77uLS5tv8	3TeAZFYFxgvp 6AyXsheySjfx Ap2q43bQLNek gZuvgwMuBfgh msuJfBpJvM5H NjZ8bGGJsNSR UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Yfn77uLS5tv8	VL7zkHvkfkoB VyCX26p5UBRL BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Mk6ShCGm6RBJ JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8