General Data

RNA Type	lncRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000546421
Gene ID:	ENSG00000257167
Gene Name:	TMPO-AS1
Sequence (UNICHARACTER ENCODING)	GGCGGCGAGCGCGCGCGGCAACCGCCAAACGCCCGCCUUUGUAGCCCCGGCCCCGCGUCCUUACCCUGCCGACGGCUGCUCGGCUCCGGCCCGCGGCGGCGGCCCCAGAGCCGAGGACCGGGGUGGGCUCGCGCUCUUCGUCACUGGAGAAGUCCGGGGGCCCCUUGCUGUUGGUGCCGGCGGGGAGCGGCGGCCGGUUGCGAGCCGUGAGGUGCUGCAGGЖCCGAGGGGUCUUCCAGGAЖCUCCGGCAUCUCGGGGAUCUGCGAAGCCCCCUCCCCACAGCCUUUGCCGCCGCCGCUCACGCCGGCGCGCUUGCUCCUGGCCGGGGACCGCGCUGCCGCCUCCGAGCCUCACGGCUCCUGCCCGGGAAGAGCGCUGCGGAGCGGAACAAAAACUCGCGGACACAAAGCCAAGCCAGACCCGGACACAAAAGACCCCAGAGCCGAACUACGAACCAACUGCGGCCAAGCUGGAAGCUCGCACCAACCCCAGCCCACACACUACAGGCAGGAGGCGAGCAGCCUGCUUCGCCCACGCCCCAAGAACGCGCGCCGCCAUUGGCGGGCGACGGGAGGAAGCGCGGCGGUGAUUGGCGAGACGGCUCGCGCGGGUUCCAUUAGCCGCCGCGCUGAGCGAGAGGAGACGCCGAUAAGGGЖCAGGUCGUACUGCUUUUGUGCGCCGUUUCCUCUCCCUCCCCCAGCUUGAGAAGCAGCUUUCGUCUCUGGGGUCGAUCGCCUACGAACGCGCCGAAUUCCACGCCAGUGUGAGGЖCCCUUGGCUGGGCCUUUCUUCCUCCCGGGЖCACUGAAGCUCCAAGAGUAGCCGCAGCCUUGCCUUCCCCAAACGCUAGCCCUGAAGGGGAAGAAAAGAAGCGAGGCUUGUCUGCAGGCACUCAUAUUCCUUGAUUUGAUUUЖCUUUGGGAGGGGGAGGGCGGGGAGUUACCCCUCUCCUCGCGAЖCGCUUCUUUUGUUCCAGAAACCCAGGGGAAGCCAGACCUCUACAAUCGGGCACUUAAAUUACCCUUGAAUUUGUGACAAAAGUGUACUAUACCAUUCACUUCUUAGUGUCAUAGUUGGGGCAUGUCUAAAUUGUUUAAUUUGAЖCAGUGCGUUCAGACGCAAGACAAAUUCGCGCUUGCAUUUUUGUUGAAACCGUCUCUGGCUUUGGAUCCCACCACCCGCAAGAAUCCUAAACCUAACGUUUGAUAACAAAACGAAGGAGAACCCUUGGGAACCCCCUCAAUGGUCAAUUUAAAAUAACAGAUGGUGCAUAAUCCUAAAGGAAGACUAGUGACCUAUAAUUAGGCCUAGAACCCUAAUCAAACCCGUAUUACCGAUCCAAAUUAAAACCUGGUAGAAUCUAAUACAUUGACUGCAAUUAAAAUGUUUGCCUGGAAAUUAGUAUCACUGAUGACAAAUAUUUGUAUUUCUGAUGAAUAUGUAUGUUUAAAGAUGCUUUCUUUCUAGAAAGGAAAGGAGACCUUGGAUGUAGGGUGUGUUAAUCAUUUCCCCAGAAUCUGAGCUCCAAACUAUGUUUUAGAAACUGGUUAAAUUUUUUUUAAAUGUUUGCCUGCUUUCUACAUUGCUAGGUUAGAAUACAUUUAAAACAAACGCCUUCACUAAAAAUGUUUCCUAUGA
Sequence (SHORT NAMES ENCODING)	GGCGGCGAGCGCGCGCGGCAACCGCCAAACGCCCGCCUUUGUAGCCCCGGCCCCGCGUCCUUACCCUGCCGACGGCUGCUCGGCUCCGGCCCGCGGCGGCGGCCCCAGAGCCGAGGACCGGGGUGGGCUCGCGCUCUUCGUCACUGGAGAAGUCCGGGGGCCCCUUGCUGUUGGUGCCGGCGGGGAGCGGCGGCCGGUUGCGAGCCGUGAGGUGCUGCAGGm6ACCGAGGGGUCUUCCAGGAm6ACUCCGGCAUCUCGGGGAUCUGCGAAGCCCCCUCCCCACAGCCUUUGCCGCCGCCGCUCACGCCGGCGCGCUUGCUCCUGGCCGGGGACCGCGCUGCCGCCUCCGAGCCUCACGGCUCCUGCCCGGGAAGAGCGCUGCGGAGCGGAACAAAAACUCGCGGACACAAAGCCAAGCCAGACCCGGACACAAAAGACCCCAGAGCCGAACUACGAACCAACUGCGGCCAAGCUGGAAGCUCGCACCAACCCCAGCCCACACACUACAGGCAGGAGGCGAGCAGCCUGCUUCGCCCACGCCCCAAGAACGCGCGCCGCCAUUGGCGGGCGACGGGAGGAAGCGCGGCGGUGAUUGGCGAGACGGCUCGCGCGGGUUCCAUUAGCCGCCGCGCUGAGCGAGAGGAGACGCCGAUAAGGGm6ACAGGUCGUACUGCUUUUGUGCGCCGUUUCCUCUCCCUCCCCCAGCUUGAGAAGCAGCUUUCGUCUCUGGGGUCGAUCGCCUACGAACGCGCCGAAUUCCACGCCAGUGUGAGGm6ACCCUUGGCUGGGCCUUUCUUCCUCCCGGGm6ACACUGAAGCUCCAAGAGUAGCCGCAGCCUUGCCUUCCCCAAACGCUAGCCCUGAAGGGGAAGAAAAGAAGCGAGGCUUGUCUGCAGGCACUCAUAUUCCUUGAUUUGAUUUm6ACUUUGGGAGGGGGAGGGCGGGGAGUUACCCCUCUCCUCGCGAm6ACGCUUCUUUUGUUCCAGAAACCCAGGGGAAGCCAGACCUCUACAAUCGGGCACUUAAAUUACCCUUGAAUUUGUGACAAAAGUGUACUAUACCAUUCACUUCUUAGUGUCAUAGUUGGGGCAUGUCUAAAUUGUUUAAUUUGAm6ACAGUGCGUUCAGACGCAAGACAAAUUCGCGCUUGCAUUUUUGUUGAAACCGUCUCUGGCUUUGGAUCCCACCACCCGCAAGAAUCCUAAACCUAACGUUUGAUAACAAAACGAAGGAGAACCCUUGGGAACCCCCUCAAUGGUCAAUUUAAAAUAACAGAUGGUGCAUAAUCCUAAAGGAAGACUAGUGACCUAUAAUUAGGCCUAGAACCCUAAUCAAACCCGUAUUACCGAUCCAAAUUAAAACCUGGUAGAAUCUAAUACAUUGACUGCAAUUAAAAUGUUUGCCUGGAAAUUAGUAUCACUGAUGACAAAUAUUUGUAUUUCUGAUGAAUAUGUAUGUUUAAAGAUGCUUUCUUUCUAGAAAGGAAAGGAGACCUUGGAUGUAGGGUGUGUUAAUCAUUUCCCCAGAAUCUGAGCUCCAAACUAUGUUUUAGAAACUGGUUAAAUUUUUUUUAAAUGUUUGCCUGCUUUCUACAUUGCUAGGUUAGAAUACAUUUAAAACAAACGCCUUCACUAAAAAUGUUUCCUAUGA
Sequence (MODOMICS CODE ENCODING)	GGCGGCGAGCGCGCGCGGCAACCGCCAAACGCCCGCCUUUGUAGCCCCGGCCCCGCGUCCUUACCCUGCCGACGGCUGCUCGGCUCCGGCCCGCGGCGGCGGCCCCAGAGCCGAGGACCGGGGUGGGCUCGCGCUCUUCGUCACUGGAGAAGUCCGGGGGCCCCUUGCUGUUGGUGCCGGCGGGGAGCGGCGGCCGGUUGCGAGCCGUGAGGUGCUGCAGG2000000006ACCGAGGGGUCUUCCAGGA2000000006ACUCCGGCAUCUCGGGGAUCUGCGAAGCCCCCUCCCCACAGCCUUUGCCGCCGCCGCUCACGCCGGCGCGCUUGCUCCUGGCCGGGGACCGCGCUGCCGCCUCCGAGCCUCACGGCUCCUGCCCGGGAAGAGCGCUGCGGAGCGGAACAAAAACUCGCGGACACAAAGCCAAGCCAGACCCGGACACAAAAGACCCCAGAGCCGAACUACGAACCAACUGCGGCCAAGCUGGAAGCUCGCACCAACCCCAGCCCACACACUACAGGCAGGAGGCGAGCAGCCUGCUUCGCCCACGCCCCAAGAACGCGCGCCGCCAUUGGCGGGCGACGGGAGGAAGCGCGGCGGUGAUUGGCGAGACGGCUCGCGCGGGUUCCAUUAGCCGCCGCGCUGAGCGAGAGGAGACGCCGAUAAGGG2000000006ACAGGUCGUACUGCUUUUGUGCGCCGUUUCCUCUCCCUCCCCCAGCUUGAGAAGCAGCUUUCGUCUCUGGGGUCGAUCGCCUACGAACGCGCCGAAUUCCACGCCAGUGUGAGG2000000006ACCCUUGGCUGGGCCUUUCUUCCUCCCGGG2000000006ACACUGAAGCUCCAAGAGUAGCCGCAGCCUUGCCUUCCCCAAACGCUAGCCCUGAAGGGGAAGAAAAGAAGCGAGGCUUGUCUGCAGGCACUCAUAUUCCUUGAUUUGAUUU2000000006ACUUUGGGAGGGGGAGGGCGGGGAGUUACCCCUCUCCUCGCGA2000000006ACGCUUCUUUUGUUCCAGAAACCCAGGGGAAGCCAGACCUCUACAAUCGGGCACUUAAAUUACCCUUGAAUUUGUGACAAAAGUGUACUAUACCAUUCACUUCUUAGUGUCAUAGUUGGGGCAUGUCUAAAUUGUUUAAUUUGA2000000006ACAGUGCGUUCAGACGCAAGACAAAUUCGCGCUUGCAUUUUUGUUGAAACCGUCUCUGGCUUUGGAUCCCACCACCCGCAAGAAUCCUAAACCUAACGUUUGAUAACAAAACGAAGGAGAACCCUUGGGAACCCCCUCAAUGGUCAAUUUAAAAUAACAGAUGGUGCAUAAUCCUAAAGGAAGACUAGUGACCUAUAAUUAGGCCUAGAACCCUAAUCAAACCCGUAUUACCGAUCCAAAUUAAAACCUGGUAGAAUCUAAUACAUUGACUGCAAUUAAAAUGUUUGCCUGGAAAUUAGUAUCACUGAUGACAAAUAUUUGUAUUUCUGAUGAAUAUGUAUGUUUAAAGAUGCUUUCUUUCUAGAAAGGAAAGGAGACCUUGGAUGUAGGGUGUGUUAAUCAUUUCCCCAGAAUCUGAGCUCCAAACUAUGUUUUAGAAACUGGUUAAAUUUUUUUUAAAUGUUUGCCUGCUUUCUACAUUGCUAGGUUAGAAUACAUUUAAAACAAACGCCUUCACUAAAAAUGUUUCCUAUGA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	222	241	655	769	799	911	954	1098
Modification Positions	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A
Genomic Coordinates	12:98515896:-	12:98515877:-	12:98515377:-	12:98515263:-	12:98515233:-	12:98515121:-	12:98515078:-	12:98514934:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	3TeAZFYFxgvp 5Nnepx5V7yHo 6AyXsheySjfx Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 8cMbzB4aD5Se BkoLW2CBToyL BsCW7emuRX7M Lny8GcCeVGc9 XUkp6ghERQML Yfn77uLS5tv8	3TeAZFYFxgvp 6AyXsheySjfx aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 Yfn77uLS5tv8	3TeAZFYFxgvp 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn WiQcrNTGZHPT KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 PF5iqBNSbHaa UKen6WEino9G BtsJQJ3DteUq bXBqJigD9oV3 Yfn77uLS5tv8	3TeAZFYFxgvp 6AyXsheySjfx aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BsCW7emuRX7M Lny8GcCeVGc9 XUkp6ghERQML BtsJQJ3DteUq bXBqJigD9oV3 Yfn77uLS5tv8	3TeAZFYFxgvp 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 UKen6WEino9G BtsJQJ3DteUq Yfn77uLS5tv8	5FhTyQVy2tKW 5Nnepx5V7yHo msuJfBpJvM5H VyCX26p5UBRL Lny8GcCeVGc9 UKen6WEino9G	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BsCW7emuRX7M Lny8GcCeVGc9 LZJKems7W2wi XUkp6ghERQML	msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BsCW7emuRX7M KENzb7mwdBd9 Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq bXBqJigD9oV3 JkWoGWVwjNda Yfn77uLS5tv8