General Data

RNA Type	unknown
Original Source	Sci-ModoM
Transcript ID:	ENST00000547169
Gene ID:	ENSG00000175215
Gene Name:	CTDSP2
Sequence (UNICHARACTER ENCODING)	GGUUGAGGUUGGGACCACUGAUCCAUUGGAAGCCUGGUGAGGGGUACAGCCAGUUCUCCGGGUCUGUGGGGUCUCAGGGGGCCGCAGGCUUCCAGCCAGGUAGCCCAGGAGGCUGGGCUGCAGGGGUUGAGAGCUCCUUGCUGCUGUGUAACUGGUGAAGGUACCCAGUACUGCAAACCUUCAUCACAGGGAUGCCUCCAACAGGCUGCUCUGCUCUUCCUCAGGUGUAUGUGCUCAAGAGGCCUUAUGUGGAUGAGUUCCUGAGACGCAUGGGGGAACUCUUUGAAUGUGUUCUCUUCACUGCCAGCCUGGCCAAGUAUGCCGACCCUGUGACAGACCUGCUGGACCGGUGUGGGGUGUUCCGGGCCCGCCUAUUCCGUGAGUCUUGCGUGUUCCACCAGGGCUGCUACGUCAAGGACCUCAGCCGCCUGGGGAGGGACCUGAGAAAGACCCUCAPCCUGGACAACUCGCCUGCUUCUUACAUAUUCCACCCCGAGAAUGCAGUGCCUGUGCAGUCCUGGUUUGAUGACAUGGCAGACACUGAGUUGCUGAACCUGAUCCCAAUCUUUGAGGAGCUGAGCGGAGCAGAGGACGUCUACACCAGCCUUGGGCAGCUGCGGGCCCCUUAGCCUGCCCUGCUUCCAAGCGACGGCCAUCCCAGUAGGGGЖCUUUCCCACACUGUGCCUPUACGAUCAGCGUGACAGAGUAGAAGCUGGAGUGCCUCACCACACGGCCCGGAAACAGCGGGAAGUAACUGGAAAGAGCUPUAGGЖCAGCUUAGAUGCCGAGUGGGCGAAUGCCAGACCAAUGAUACCCAGAGCUACCUGCCGCCAACUUGUUGAGAUGUGUGUUUGACUGUGAGAGAGUGUGUGUUUGUGUGUGUGUUUUGCCAUGAЖCUGUGGCCCCAGUGUAUAGUGUUUCAGUGGGGGAGAAGCUGAAAGACCAAGЖCUCUUCCCAAGUUAGCUUGUCUCCUCUCCUGUCACCCUAAGAGCCACUGAGUUGUGUAGGGAUGAAGЖCUAUUGAAGЖCUCCAUUGCCAAACCAUGGCCUUUCCUCAGUGUUGUAAGGCCUAUGCCAAGGAUAAAGGAAGGGUAUGCCUUUGGGUACUCCAGGCACACACCUUUCUGAAAUCCUUCUCCAGCCAGCUGCUGCAGACAAAAGAUCACAUUUCUGGGAAGAUGAGAЖCUUGUUUCCAGACCAGCAPCCAGUGGCCAUCAGGUCUUGUGGCCCAAAGGCUAUGCUUGCCUCCGGCUGAGUGCCUGGGAUAGGCCUUUUCUAUGUCUCCCCAAGGCUGGGGUGCUGAGCCUGCCUUCCUCACCACCUAGCCAUAGUCUCAAACCUGU
Sequence (SHORT NAMES ENCODING)	GGUUGAGGUUGGGACCACUGAUCCAUUGGAAGCCUGGUGAGGGGUACAGCCAGUUCUCCGGGUCUGUGGGGUCUCAGGGGGCCGCAGGCUUCCAGCCAGGUAGCCCAGGAGGCUGGGCUGCAGGGGUUGAGAGCUCCUUGCUGCUGUGUAACUGGUGAAGGUACCCAGUACUGCAAACCUUCAUCACAGGGAUGCCUCCAACAGGCUGCUCUGCUCUUCCUCAGGUGUAUGUGCUCAAGAGGCCUUAUGUGGAUGAGUUCCUGAGACGCAUGGGGGAACUCUUUGAAUGUGUUCUCUUCACUGCCAGCCUGGCCAAGUAUGCCGACCCUGUGACAGACCUGCUGGACCGGUGUGGGGUGUUCCGGGCCCGCCUAUUCCGUGAGUCUUGCGUGUUCCACCAGGGCUGCUACGUCAAGGACCUCAGCCGCCUGGGGAGGGACCUGAGAAAGACCCUCAYCCUGGACAACUCGCCUGCUUCUUACAUAUUCCACCCCGAGAAUGCAGUGCCUGUGCAGUCCUGGUUUGAUGACAUGGCAGACACUGAGUUGCUGAACCUGAUCCCAAUCUUUGAGGAGCUGAGCGGAGCAGAGGACGUCUACACCAGCCUUGGGCAGCUGCGGGCCCCUUAGCCUGCCCUGCUUCCAAGCGACGGCCAUCCCAGUAGGGGm6ACUUUCCCACACUGUGCCUYUACGAUCAGCGUGACAGAGUAGAAGCUGGAGUGCCUCACCACACGGCCCGGAAACAGCGGGAAGUAACUGGAAAGAGCUYUAGGm6ACAGCUUAGAUGCCGAGUGGGCGAAUGCCAGACCAAUGAUACCCAGAGCUACCUGCCGCCAACUUGUUGAGAUGUGUGUUUGACUGUGAGAGAGUGUGUGUUUGUGUGUGUGUUUUGCCAUGAm6ACUGUGGCCCCAGUGUAUAGUGUUUCAGUGGGGGAGAAGCUGAAAGACCAAGm6ACUCUUCCCAAGUUAGCUUGUCUCCUCUCCUGUCACCCUAAGAGCCACUGAGUUGUGUAGGGAUGAAGm6ACUAUUGAAGm6ACUCCAUUGCCAAACCAUGGCCUUUCCUCAGUGUUGUAAGGCCUAUGCCAAGGAUAAAGGAAGGGUAUGCCUUUGGGUACUCCAGGCACACACCUUUCUGAAAUCCUUCUCCAGCCAGCUGCUGCAGACAAAAGAUCACAUUUCUGGGAAGAUGAGAm6ACUUGUUUCCAGACCAGCAYCCAGUGGCCAUCAGGUCUUGUGGCCCAAAGGCUAUGCUUGCCUCCGGCUGAGUGCCUGGGAUAGGCCUUUUCUAUGUCUCCCCAAGGCUGGGGUGCUGAGCCUGCCUUCCUCACCACCUAGCCAUAGUCUCAAACCUGU
Sequence (MODOMICS CODE ENCODING)	GGUUGAGGUUGGGACCACUGAUCCAUUGGAAGCCUGGUGAGGGGUACAGCCAGUUCUCCGGGUCUGUGGGGUCUCAGGGGGCCGCAGGCUUCCAGCCAGGUAGCCCAGGAGGCUGGGCUGCAGGGGUUGAGAGCUCCUUGCUGCUGUGUAACUGGUGAAGGUACCCAGUACUGCAAACCUUCAUCACAGGGAUGCCUCCAACAGGCUGCUCUGCUCUUCCUCAGGUGUAUGUGCUCAAGAGGCCUUAUGUGGAUGAGUUCCUGAGACGCAUGGGGGAACUCUUUGAAUGUGUUCUCUUCACUGCCAGCCUGGCCAAGUAUGCCGACCCUGUGACAGACCUGCUGGACCGGUGUGGGGUGUUCCGGGCCCGCCUAUUCCGUGAGUCUUGCGUGUUCCACCAGGGCUGCUACGUCAAGGACCUCAGCCGCCUGGGGAGGGACCUGAGAAAGACCCUCA2000000009UCCUGGACAACUCGCCUGCUUCUUACAUAUUCCACCCCGAGAAUGCAGUGCCUGUGCAGUCCUGGUUUGAUGACAUGGCAGACACUGAGUUGCUGAACCUGAUCCCAAUCUUUGAGGAGCUGAGCGGAGCAGAGGACGUCUACACCAGCCUUGGGCAGCUGCGGGCCCCUUAGCCUGCCCUGCUUCCAAGCGACGGCCAUCCCAGUAGGGG2000000006ACUUUCCCACACUGUGCCU2000000009UUACGAUCAGCGUGACAGAGUAGAAGCUGGAGUGCCUCACCACACGGCCCGGAAACAGCGGGAAGUAACUGGAAAGAGCU2000000009UUAGG2000000006ACAGCUUAGAUGCCGAGUGGGCGAAUGCCAGACCAAUGAUACCCAGAGCUACCUGCCGCCAACUUGUUGAGAUGUGUGUUUGACUGUGAGAGAGUGUGUGUUUGUGUGUGUGUUUUGCCAUGA2000000006ACUGUGGCCCCAGUGUAUAGUGUUUCAGUGGGGGAGAAGCUGAAAGACCAAG2000000006ACUCUUCCCAAGUUAGCUUGUCUCCUCUCCUGUCACCCUAAGAGCCACUGAGUUGUGUAGGGAUGAAG2000000006ACUAUUGAAG2000000006ACUCCAUUGCCAAACCAUGGCCUUUCCUCAGUGUUGUAAGGCCUAUGCCAAGGAUAAAGGAAGGGUAUGCCUUUGGGUACUCCAGGCACACACCUUUCUGAAAUCCUUCUCCAGCCAGCUGCUGCAGACAAAAGAUCACAUUUCUGGGAAGAUGAGA2000000006ACUUGUUUCCAGACCAGCA2000000009UCCAGUGGCCAUCAGGUCUUGUGGCCCAAAGGCUAUGCUUGCCUCCGGCUGAGUGCCUGGGAUAGGCCUUUUCUAUGUCUCCCCAAGGCUGGGGUGCUGAGCCUGCCUUCCUCACCACCUAGCCAUAGUCUCAAACCUGU

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	457	668	687	767	772	895	947	1015	1025	1182	1201
Modification Positions	Y	m6A	Y	Y	m6A	m6A	m6A	m6A	m6A	m6A	Y
Genomic Coordinates	12:57823950:-	12:57823563:-	12:57823544:-	12:57823464:-	12:57823459:-	12:57823336:-	12:57823284:-	12:57823216:-	12:57823206:-	12:57823049:-	12:57823030:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq bXBqJigD9oV3 Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U D6ncpa2PPWj3 ArijeGVTwYBw nfCHyrYzE6fB KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 PF5iqBNSbHaa UKen6WEino9G 834aFpha8RvT dA7YoLwHrzgR ksEP666umrV9 BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	3TeAZFYFxgvp 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR QmcpiJ88DBDn QpiKdbVikVz2 V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U D6ncpa2PPWj3 93arJtwJmuS9 BkoLW2CBToyL nfCHyrYzE6fB WiQcrNTGZHPT UKen6WEino9G 834aFpha8RvT dA7YoLwHrzgR ksEP666umrV9 BtsJQJ3DteUq Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H nGifePrmgHfe QmcpiJ88DBDn QpiKdbVikVz2 V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn KTLz8piFYdwC KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 PF5iqBNSbHaa UKen6WEino9G BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U 8cMbzB4aD5Se 93arJtwJmuS9 BkoLW2CBToyL KTLz8piFYdwC nfCHyrYzE6fB WiQcrNTGZHPT KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 PF5iqBNSbHaa UKen6WEino9G 834aFpha8RvT dA7YoLwHrzgR ksEP666umrV9 BtsJQJ3DteUq Yfn77uLS5tv8	3TeAZFYFxgvp 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U 8cMbzB4aD5Se 93arJtwJmuS9 BkoLW2CBToyL KTLz8piFYdwC WiQcrNTGZHPT KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 PF5iqBNSbHaa UKen6WEino9G 834aFpha8RvT dA7YoLwHrzgR ksEP666umrV9 BtsJQJ3DteUq Yfn77uLS5tv8	3TeAZFYFxgvp 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 8cMbzB4aD5Se WiQcrNTGZHPT KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 PF5iqBNSbHaa UKen6WEino9G 834aFpha8RvT dA7YoLwHrzgR ksEP666umrV9 BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	3TeAZFYFxgvp 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U D6ncpa2PPWj3 KTLz8piFYdwC KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 PF5iqBNSbHaa UKen6WEino9G BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP JkWoGWVwjNda Yfn77uLS5tv8