General Data

RNA Type	unknown
Original Source	Sci-ModoM
Transcript ID:	ENST00000700639
Gene ID:	ENSG00000105223
Gene Name:	PLD3
Sequence (UNICHARACTER ENCODING)	ACCCAGCCUGGCCCCUGAUCUCUGCCCCUGCUGGUCACAGGUGCCCAGGUCCGCAUGGUGGACAUGCAGAAGCUGACCCAUGGCGUCCUGCAUACCAAGUUCUGGGUGGUGGACCAGACCCACUUCUACCUGGGCAGUGCCAACAUGGACUGGCGUUCACUGACCCAGGUCAAGGAGCUGGGCGUGGUCAUGUACAACUGCAGCUGCCUGGCUCGAGЖCCUGACCAAGAUCUUUGAGGCCUACUGGUUCCUGGGCCAGGCAGGCAGCUCCAPCCCAUCAACUUGGCCCCGGUUCUAUGACACCCGCUACЖACCAAGAGACACCAAUGGAGAUCUGCCUCAAUGGAACCCCUGCUCUGGCCUACCUGGCGAGUGCGCCCCCACCCCUGUGUCCAAGUGGCCGCACUCCAGACCUGAAGGCUCUACUCAACGUGGUGGACAAUGCCCGGAGUUUCAUCUACGUCGCUGUCAUGAACUACCUGCCCACUCUGGAGUUCUCCCACCCUCACAGGUUCUGGCCUGCCAUUGACGAUGGGCUGCGGCGGGCCACCUACGAGCGUGGCGUCAAGGUGCGCCUGCUCAUCAGCUGCUGGGGACACUCGGAGCCAPCCAUGCGGGCCUUCCUGCUCUCUCUGGCUGCCCUGCGUGACAACCAUACCCACUCUGACAPCCAGGUGAAACUCUUUGUGGUCCCCGCGGAUGAGGCCCAGGCUCGAAUCCCAUAUGCCCGUGUCAACCACAACAAGUACAUGGUGACUGAACGCGCCACCUACAUCGGAACCUCCAACUGGUCUGGCAACUACUUCACGGAGACGGCGGGCACCUCGCUGCPGGUGACGCAGAAUGGGAGGGGCGGCCUGCGGAGCCAGCUGGAGGCCAUUUUCCUGAGGGACUGGGACUCCCCUUACAGCCAUGACCUUGACACCUCAGCUGACAGCGUGGGCAACGCCUGCCGCCUGCUCUGAGGCCCGAUCCAGUGGGCAGGCCAAGGCCUGCUGGGCCCCCGCGGACCCAGGUGCUCUGGGUCACGGUCCCUGUCCCCGCGCCCCCGCUUCUGUCUGCCCCAUUGUGGCUCCUCAGGCUCUCUCCCCUGCUCUCCCACCUCUACCPCCACCCCCACCGGCCUGACGCUGUGGCCCCGGGACCCAGCAGAGCUGGGGGAGGGAUCAGCCCCCAAAGAAAUGGGGGUGCAUGCUGGGCCUGGCCCCCUGGCCCACCCCCACUUUCCAGGGCAAAAAGGGCCCAGGGUUAUAAUAAGUAAAUAЖCUUGUCUGUACAGCCUGUGCCUGACUGAGUGGUGUGAGAUGGGGUGCAGGGGUAGGGGACAGCUGGCAUGGGCCUCUGGUGGGGACAUCUUUUUGUGCUGAGCCCUCAACAUGUCACUGGCAUGUGCUGAGCCCUCAGUGUGUGACCAGUGUGGGUUAGCAUGUACUGAGCCCUCAGCAUGUGCUGGCAUGGGUUGGCAUGUGCUGAGCCCUUAACAUGUAGUGUACAUGGGCUGACCUGUGCUGAGCAUGCAGCGUGCCACCCUGUGGCCCGGCAUGGACUUAGCACUCAUGUAGCCAGCAUGGGUAUGUGCUGCAGAGAAGCAUGUUCCCAGAUUGAUCAGCAGGGACCAAACCAUUGCCACAUCCCAAGGGUGAACAAGCAUGGCUGAGCACCAGAGUGUGCACCAAGUGUGAAUUUAGGCCUGCCAAGUGGAUUUACACCCAGCACGUCCCAAAUGUGGGUGAGUGCAUGCCAACCCUGUAAACAUGUAGGAAGGACAGGUCAACAGACAAGGAGACCCCAGCAUCCGGCAAACUUGAUUAACACAUACUGAACACAGCAUGUUCUGAGGGUGGAUUCCCAACACGCCAAGCACAUAGCGUAUUUAGGACAAGGGUUAGUCAACCAAGCACAGCUUUUCCCUCCUAGUGUGACAGCAGCCCAGGCUCCCGCCUAAGCCAGUGGUCAACUGGGCCCAGCAUCGCAGAGCAAGUCACUGGGUGCCAGCCUGGAGCCCCCAUUCCCCCCAGGGCCAGUCCAAGCCCCAGGCAGUGAGAGCAGGCUUGAAGCAGGACUGCUGAACAGUUCUAUAUUGAAAUAGACAGAGGCAGCAGGGCCAAGGGCGAGCGCAGGGCCAGCGGGGUGCAGCCCCCUUUCCUGCUGUCCUUCUGGCCAAGGAGCAUGGGCCAGACUCCAAAGCCCUGCUG
Sequence (SHORT NAMES ENCODING)	ACCCAGCCUGGCCCCUGAUCUCUGCCCCUGCUGGUCACAGGUGCCCAGGUCCGCAUGGUGGACAUGCAGAAGCUGACCCAUGGCGUCCUGCAUACCAAGUUCUGGGUGGUGGACCAGACCCACUUCUACCUGGGCAGUGCCAACAUGGACUGGCGUUCACUGACCCAGGUCAAGGAGCUGGGCGUGGUCAUGUACAACUGCAGCUGCCUGGCUCGAGm6ACCUGACCAAGAUCUUUGAGGCCUACUGGUUCCUGGGCCAGGCAGGCAGCUCCAYCCCAUCAACUUGGCCCCGGUUCUAUGACACCCGCUACm6AACCAAGAGACACCAAUGGAGAUCUGCCUCAAUGGAACCCCUGCUCUGGCCUACCUGGCGAGUGCGCCCCCACCCCUGUGUCCAAGUGGCCGCACUCCAGACCUGAAGGCUCUACUCAACGUGGUGGACAAUGCCCGGAGUUUCAUCUACGUCGCUGUCAUGAACUACCUGCCCACUCUGGAGUUCUCCCACCCUCACAGGUUCUGGCCUGCCAUUGACGAUGGGCUGCGGCGGGCCACCUACGAGCGUGGCGUCAAGGUGCGCCUGCUCAUCAGCUGCUGGGGACACUCGGAGCCAYCCAUGCGGGCCUUCCUGCUCUCUCUGGCUGCCCUGCGUGACAACCAUACCCACUCUGACAYCCAGGUGAAACUCUUUGUGGUCCCCGCGGAUGAGGCCCAGGCUCGAAUCCCAUAUGCCCGUGUCAACCACAACAAGUACAUGGUGACUGAACGCGCCACCUACAUCGGAACCUCCAACUGGUCUGGCAACUACUUCACGGAGACGGCGGGCACCUCGCUGCYGGUGACGCAGAAUGGGAGGGGCGGCCUGCGGAGCCAGCUGGAGGCCAUUUUCCUGAGGGACUGGGACUCCCCUUACAGCCAUGACCUUGACACCUCAGCUGACAGCGUGGGCAACGCCUGCCGCCUGCUCUGAGGCCCGAUCCAGUGGGCAGGCCAAGGCCUGCUGGGCCCCCGCGGACCCAGGUGCUCUGGGUCACGGUCCCUGUCCCCGCGCCCCCGCUUCUGUCUGCCCCAUUGUGGCUCCUCAGGCUCUCUCCCCUGCUCUCCCACCUCUACCYCCACCCCCACCGGCCUGACGCUGUGGCCCCGGGACCCAGCAGAGCUGGGGGAGGGAUCAGCCCCCAAAGAAAUGGGGGUGCAUGCUGGGCCUGGCCCCCUGGCCCACCCCCACUUUCCAGGGCAAAAAGGGCCCAGGGUUAUAAUAAGUAAAUAm6ACUUGUCUGUACAGCCUGUGCCUGACUGAGUGGUGUGAGAUGGGGUGCAGGGGUAGGGGACAGCUGGCAUGGGCCUCUGGUGGGGACAUCUUUUUGUGCUGAGCCCUCAACAUGUCACUGGCAUGUGCUGAGCCCUCAGUGUGUGACCAGUGUGGGUUAGCAUGUACUGAGCCCUCAGCAUGUGCUGGCAUGGGUUGGCAUGUGCUGAGCCCUUAACAUGUAGUGUACAUGGGCUGACCUGUGCUGAGCAUGCAGCGUGCCACCCUGUGGCCCGGCAUGGACUUAGCACUCAUGUAGCCAGCAUGGGUAUGUGCUGCAGAGAAGCAUGUUCCCAGAUUGAUCAGCAGGGACCAAACCAUUGCCACAUCCCAAGGGUGAACAAGCAUGGCUGAGCACCAGAGUGUGCACCAAGUGUGAAUUUAGGCCUGCCAAGUGGAUUUACACCCAGCACGUCCCAAAUGUGGGUGAGUGCAUGCCAACCCUGUAAACAUGUAGGAAGGACAGGUCAACAGACAAGGAGACCCCAGCAUCCGGCAAACUUGAUUAACACAUACUGAACACAGCAUGUUCUGAGGGUGGAUUCCCAACACGCCAAGCACAUAGCGUAUUUAGGACAAGGGUUAGUCAACCAAGCACAGCUUUUCCCUCCUAGUGUGACAGCAGCCCAGGCUCCCGCCUAAGCCAGUGGUCAACUGGGCCCAGCAUCGCAGAGCAAGUCACUGGGUGCCAGCCUGGAGCCCCCAUUCCCCCCAGGGCCAGUCCAAGCCCCAGGCAGUGAGAGCAGGCUUGAAGCAGGACUGCUGAACAGUUCUAUAUUGAAAUAGACAGAGGCAGCAGGGCCAAGGGCGAGCGCAGGGCCAGCGGGGUGCAGCCCCCUUUCCUGCUGUCCUUCUGGCCAAGGAGCAUGGGCCAGACUCCAAAGCCCUGCUG
Sequence (MODOMICS CODE ENCODING)	ACCCAGCCUGGCCCCUGAUCUCUGCCCCUGCUGGUCACAGGUGCCCAGGUCCGCAUGGUGGACAUGCAGAAGCUGACCCAUGGCGUCCUGCAUACCAAGUUCUGGGUGGUGGACCAGACCCACUUCUACCUGGGCAGUGCCAACAUGGACUGGCGUUCACUGACCCAGGUCAAGGAGCUGGGCGUGGUCAUGUACAACUGCAGCUGCCUGGCUCGAG2000000006ACCUGACCAAGAUCUUUGAGGCCUACUGGUUCCUGGGCCAGGCAGGCAGCUCCA2000000009UCCCAUCAACUUGGCCCCGGUUCUAUGACACCCGCUAC2000000006AACCAAGAGACACCAAUGGAGAUCUGCCUCAAUGGAACCCCUGCUCUGGCCUACCUGGCGAGUGCGCCCCCACCCCUGUGUCCAAGUGGCCGCACUCCAGACCUGAAGGCUCUACUCAACGUGGUGGACAAUGCCCGGAGUUUCAUCUACGUCGCUGUCAUGAACUACCUGCCCACUCUGGAGUUCUCCCACCCUCACAGGUUCUGGCCUGCCAUUGACGAUGGGCUGCGGCGGGCCACCUACGAGCGUGGCGUCAAGGUGCGCCUGCUCAUCAGCUGCUGGGGACACUCGGAGCCA2000000009UCCAUGCGGGCCUUCCUGCUCUCUCUGGCUGCCCUGCGUGACAACCAUACCCACUCUGACA2000000009UCCAGGUGAAACUCUUUGUGGUCCCCGCGGAUGAGGCCCAGGCUCGAAUCCCAUAUGCCCGUGUCAACCACAACAAGUACAUGGUGACUGAACGCGCCACCUACAUCGGAACCUCCAACUGGUCUGGCAACUACUUCACGGAGACGGCGGGCACCUCGCUGC2000000009UGGUGACGCAGAAUGGGAGGGGCGGCCUGCGGAGCCAGCUGGAGGCCAUUUUCCUGAGGGACUGGGACUCCCCUUACAGCCAUGACCUUGACACCUCAGCUGACAGCGUGGGCAACGCCUGCCGCCUGCUCUGAGGCCCGAUCCAGUGGGCAGGCCAAGGCCUGCUGGGCCCCCGCGGACCCAGGUGCUCUGGGUCACGGUCCCUGUCCCCGCGCCCCCGCUUCUGUCUGCCCCAUUGUGGCUCCUCAGGCUCUCUCCCCUGCUCUCCCACCUCUACC2000000009UCCACCCCCACCGGCCUGACGCUGUGGCCCCGGGACCCAGCAGAGCUGGGGGAGGGAUCAGCCCCCAAAGAAAUGGGGGUGCAUGCUGGGCCUGGCCCCCUGGCCCACCCCCACUUUCCAGGGCAAAAAGGGCCCAGGGUUAUAAUAAGUAAAUA2000000006ACUUGUCUGUACAGCCUGUGCCUGACUGAGUGGUGUGAGAUGGGGUGCAGGGGUAGGGGACAGCUGGCAUGGGCCUCUGGUGGGGACAUCUUUUUGUGCUGAGCCCUCAACAUGUCACUGGCAUGUGCUGAGCCCUCAGUGUGUGACCAGUGUGGGUUAGCAUGUACUGAGCCCUCAGCAUGUGCUGGCAUGGGUUGGCAUGUGCUGAGCCCUUAACAUGUAGUGUACAUGGGCUGACCUGUGCUGAGCAUGCAGCGUGCCACCCUGUGGCCCGGCAUGGACUUAGCACUCAUGUAGCCAGCAUGGGUAUGUGCUGCAGAGAAGCAUGUUCCCAGAUUGAUCAGCAGGGACCAAACCAUUGCCACAUCCCAAGGGUGAACAAGCAUGGCUGAGCACCAGAGUGUGCACCAAGUGUGAAUUUAGGCCUGCCAAGUGGAUUUACACCCAGCACGUCCCAAAUGUGGGUGAGUGCAUGCCAACCCUGUAAACAUGUAGGAAGGACAGGUCAACAGACAAGGAGACCCCAGCAUCCGGCAAACUUGAUUAACACAUACUGAACACAGCAUGUUCUGAGGGUGGAUUCCCAACACGCCAAGCACAUAGCGUAUUUAGGACAAGGGUUAGUCAACCAAGCACAGCUUUUCCCUCCUAGUGUGACAGCAGCCCAGGCUCCCGCCUAAGCCAGUGGUCAACUGGGCCCAGCAUCGCAGAGCAAGUCACUGGGUGCCAGCCUGGAGCCCCCAUUCCCCCCAGGGCCAGUCCAAGCCCCAGGCAGUGAGAGCAGGCUUGAAGCAGGACUGCUGAACAGUUCUAUAUUGAAAUAGACAGAGGCAGCAGGGCCAAGGGCGAGCGCAGGGCCAGCGGGGUGCAGCCCCCUUUCCUGCUGUCCUUCUGGCCAAGGAGCAUGGGCCAGACUCCAAAGCCCUGCUG

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	218	272	310	607	668	830	1108	1263
Modification Positions	m6A	Y	m6A	Y	Y	Y	Y	m6A
Genomic Coordinates	19:40371722:+	19:40371776:+	19:40371814:+	19:40376706:+	19:40376767:+	19:40378040:+	19:40378318:+	19:40378473:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	KTLz8piFYdwC BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	3kRDPWwiRCgi L6w2k2VEv4EY	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr kx7BHU7ZycYE XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr kx7BHU7ZycYE XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	fhx8RaDLaBC3 hcdxNYyukcBe 5EVooy9BzECE c3ahQNCFGdsx LLvJQkDcDhob	BtsJQJ3DteUq bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr kx7BHU7ZycYE Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr kx7BHU7ZycYE Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8