General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000393599
Gene ID:	ENSG00000129355
Gene Name:	CDKN2D
Sequence (UNICHARACTER ENCODING)	AGAGCAGACCCCGCCCGGCGAGGAGGAGGGAGGGUGAGUUAGGGGGAGACCCGGCCCCCAAGGGGCGGGCGCCGGGCAGGGCCCCGCGGGCGGCCGAGGGUUGGGCCCGGCUCCCAGCCCCUCGCCGUCCUCCGGCUGACAGGGGGAGGAGCCCGCCGGGAGGGCCGGGGUCUCGGGCUGGGGAGCCGGGACGGGAGAGCAGCGCAGCCGGGUGCACCGCGGCCGCGCCCCGGGAGGGCUGUUCGGGCCAGCGCCCGCCGGCUGCUCCGCGCUGACAGCGCCGGGCUGGGGCGGGGCGGGGGGCUUUGCAGGCCGCCAGUGUCGACAUGCUGCUGGAGGAGGUUCGCGCCGGCGACCGGCUGAGUGGGGCGGCGGCCCGGGGCGACGUGCAGGAGGUGCGCCGCCUUCUGCACCGGGAGCUGGUGCAUCCCGACGCCCUCAACCGCUUCGGCAAGACGGCGCUGCAGGUCAUGAUGUUUGGCAGCACCGCCAUCGCCCUGGAGCUGCUGAAGCAAGGUGCCAGCCCCAAUGUCCAGGACACCUCCGGUACCAGUCCAGUCCAUGACGCAGCCCGCACUGGAUUCCUGGACACCCUGAAGGUCCUAGUGGAGCACGGGGCUGAUGUCAACGUGCCUGAUGGCACCGGGGCACUUCCAAUCCAUCUGGCAGUUCAAGAGGGUCACACUGCUGUGGUCAGCUUUCUGGCAGCUGAAUCUGAUCUCCAUCGCAGGGACGCCAGGGGUCUCACACCCUUGGAGCUGGCACUGCAGAGAGGGGCUCAGGACCUCGUGGЖCAUCCUGCAGGGCCACAUGGUGGCCCCGCUGUGAUCUGGGGUCACCCUCUCCAGCAAGAGAACCCCGUGGGGUUAUGUAUCAGAAGAGAGGGGAAGAAACACUUUCUCUUCUUGUUUCUCCUGCCCACUGCUGCAGUAGGGGAGGAGCACAGUUUGUGGCUUAUAGGUGUUGGUUUUGGGGGUGUGAGUGUUUGGGGGACGUUUCUCAUUUGUUUUUCUCACUCCUUUUGGUGUGUUGGACAGAGAAGGGCUCCUGCAGGCCACAGCCACCUAAACGGUUCAGUUUCUUCUGCGCCUCAGGCUGCUGGGGCCUCAGACGAGЖCCCAAGGGCAGAGCAUUUAAGAGUGAAGUCAUGACCUCCAGGGAGCCUAGAAGCUGGUGGCCUUGGCCGGCUGUGCUCAGAGACCUGAAGUGUGCACGUUGCUUCAGGCAUGGGGGGUGGGGGGAGCGUCCCAAAUCAAUAAGAAGGUAGAAUGAGUUAUGAGUUAUUCAUAUUCUGUUGGAAGCUUGUUUUCCAGUCUCUUGUACAGCGUUUUAAAAGAAAUGGAUUCUAUUUAUUAUGCUPUAUUGGAAAAAAUGUUGUAAUAAUUUAAUGUUUUUACCCAUUAAAUUAAGACUUGUGCAUGAUCACA
Sequence (SHORT NAMES ENCODING)	AGAGCAGACCCCGCCCGGCGAGGAGGAGGGAGGGUGAGUUAGGGGGAGACCCGGCCCCCAAGGGGCGGGCGCCGGGCAGGGCCCCGCGGGCGGCCGAGGGUUGGGCCCGGCUCCCAGCCCCUCGCCGUCCUCCGGCUGACAGGGGGAGGAGCCCGCCGGGAGGGCCGGGGUCUCGGGCUGGGGAGCCGGGACGGGAGAGCAGCGCAGCCGGGUGCACCGCGGCCGCGCCCCGGGAGGGCUGUUCGGGCCAGCGCCCGCCGGCUGCUCCGCGCUGACAGCGCCGGGCUGGGGCGGGGCGGGGGGCUUUGCAGGCCGCCAGUGUCGACAUGCUGCUGGAGGAGGUUCGCGCCGGCGACCGGCUGAGUGGGGCGGCGGCCCGGGGCGACGUGCAGGAGGUGCGCCGCCUUCUGCACCGGGAGCUGGUGCAUCCCGACGCCCUCAACCGCUUCGGCAAGACGGCGCUGCAGGUCAUGAUGUUUGGCAGCACCGCCAUCGCCCUGGAGCUGCUGAAGCAAGGUGCCAGCCCCAAUGUCCAGGACACCUCCGGUACCAGUCCAGUCCAUGACGCAGCCCGCACUGGAUUCCUGGACACCCUGAAGGUCCUAGUGGAGCACGGGGCUGAUGUCAACGUGCCUGAUGGCACCGGGGCACUUCCAAUCCAUCUGGCAGUUCAAGAGGGUCACACUGCUGUGGUCAGCUUUCUGGCAGCUGAAUCUGAUCUCCAUCGCAGGGACGCCAGGGGUCUCACACCCUUGGAGCUGGCACUGCAGAGAGGGGCUCAGGACCUCGUGGm6ACAUCCUGCAGGGCCACAUGGUGGCCCCGCUGUGAUCUGGGGUCACCCUCUCCAGCAAGAGAACCCCGUGGGGUUAUGUAUCAGAAGAGAGGGGAAGAAACACUUUCUCUUCUUGUUUCUCCUGCCCACUGCUGCAGUAGGGGAGGAGCACAGUUUGUGGCUUAUAGGUGUUGGUUUUGGGGGUGUGAGUGUUUGGGGGACGUUUCUCAUUUGUUUUUCUCACUCCUUUUGGUGUGUUGGACAGAGAAGGGCUCCUGCAGGCCACAGCCACCUAAACGGUUCAGUUUCUUCUGCGCCUCAGGCUGCUGGGGCCUCAGACGAGm6ACCCAAGGGCAGAGCAUUUAAGAGUGAAGUCAUGACCUCCAGGGAGCCUAGAAGCUGGUGGCCUUGGCCGGCUGUGCUCAGAGACCUGAAGUGUGCACGUUGCUUCAGGCAUGGGGGGUGGGGGGAGCGUCCCAAAUCAAUAAGAAGGUAGAAUGAGUUAUGAGUUAUUCAUAUUCUGUUGGAAGCUUGUUUUCCAGUCUCUUGUACAGCGUUUUAAAAGAAAUGGAUUCUAUUUAUUAUGCUYUAUUGGAAAAAAUGUUGUAAUAAUUUAAUGUUUUUACCCAUUAAAUUAAGACUUGUGCAUGAUCACA
Sequence (MODOMICS CODE ENCODING)	AGAGCAGACCCCGCCCGGCGAGGAGGAGGGAGGGUGAGUUAGGGGGAGACCCGGCCCCCAAGGGGCGGGCGCCGGGCAGGGCCCCGCGGGCGGCCGAGGGUUGGGCCCGGCUCCCAGCCCCUCGCCGUCCUCCGGCUGACAGGGGGAGGAGCCCGCCGGGAGGGCCGGGGUCUCGGGCUGGGGAGCCGGGACGGGAGAGCAGCGCAGCCGGGUGCACCGCGGCCGCGCCCCGGGAGGGCUGUUCGGGCCAGCGCCCGCCGGCUGCUCCGCGCUGACAGCGCCGGGCUGGGGCGGGGCGGGGGGCUUUGCAGGCCGCCAGUGUCGACAUGCUGCUGGAGGAGGUUCGCGCCGGCGACCGGCUGAGUGGGGCGGCGGCCCGGGGCGACGUGCAGGAGGUGCGCCGCCUUCUGCACCGGGAGCUGGUGCAUCCCGACGCCCUCAACCGCUUCGGCAAGACGGCGCUGCAGGUCAUGAUGUUUGGCAGCACCGCCAUCGCCCUGGAGCUGCUGAAGCAAGGUGCCAGCCCCAAUGUCCAGGACACCUCCGGUACCAGUCCAGUCCAUGACGCAGCCCGCACUGGAUUCCUGGACACCCUGAAGGUCCUAGUGGAGCACGGGGCUGAUGUCAACGUGCCUGAUGGCACCGGGGCACUUCCAAUCCAUCUGGCAGUUCAAGAGGGUCACACUGCUGUGGUCAGCUUUCUGGCAGCUGAAUCUGAUCUCCAUCGCAGGGACGCCAGGGGUCUCACACCCUUGGAGCUGGCACUGCAGAGAGGGGCUCAGGACCUCGUGG2000000006ACAUCCUGCAGGGCCACAUGGUGGCCCCGCUGUGAUCUGGGGUCACCCUCUCCAGCAAGAGAACCCCGUGGGGUUAUGUAUCAGAAGAGAGGGGAAGAAACACUUUCUCUUCUUGUUUCUCCUGCCCACUGCUGCAGUAGGGGAGGAGCACAGUUUGUGGCUUAUAGGUGUUGGUUUUGGGGGUGUGAGUGUUUGGGGGACGUUUCUCAUUUGUUUUUCUCACUCCUUUUGGUGUGUUGGACAGAGAAGGGCUCCUGCAGGCCACAGCCACCUAAACGGUUCAGUUUCUUCUGCGCCUCAGGCUGCUGGGGCCUCAGACGAG2000000006ACCCAAGGGCAGAGCAUUUAAGAGUGAAGUCAUGACCUCCAGGGAGCCUAGAAGCUGGUGGCCUUGGCCGGCUGUGCUCAGAGACCUGAAGUGUGCACGUUGCUUCAGGCAUGGGGGGUGGGGGGAGCGUCCCAAAUCAAUAAGAAGGUAGAAUGAGUUAUGAGUUAUUCAUAUUCUGUUGGAAGCUUGUUUUCCAGUCUCUUGUACAGCGUUUUAAAAGAAAUGGAUUCUAUUUAUUAUGCU2000000009UUAUUGGAAAAAAUGUUGUAAUAAUUUAAUGUUUUUACCCAUUAAAUUAAGACUUGUGCAUGAUCACA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	793	1115	1358
Modification Positions	m6A	m6A	Y
Genomic Coordinates	19:10567092:-	19:10566770:-	19:10566527:-
Level of Experimental Evidence	3	3	3
Level of Experimental Reliability	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 8cMbzB4aD5Se Lny8GcCeVGc9 Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq JkWoGWVwjNda Yfn77uLS5tv8