General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000589710
Gene ID:	ENSG00000099622
Gene Name:	CIRBP
Sequence (UNICHARACTER ENCODING)	CCAGGAUGUGUAGGGGGCGGGGCCCGGCGGAAGCGUAUAUAAGGCCGGGCUCGGGGACGCCCCCCCCUCACUCGCGCGUUAGGAGGCUCGGGUCGUUGUGGUGCGCUGUCUUCCCGCUUGCGUCAGGGACCUGCCCGACUCAGUGGAAGCGGGGAGAGGUGGUGAGAGAUGACCCCUGUUGAGGAUUUCAUUGGUGUCUGCCACAGGCCGCCAUGGCAUCAGAUGAAGGCAAACUUUUUGUUGGAGGGCUGAGUUUUGACACCAAUGAGCAGUCGCUGGAGCAGGUCUUCUCAAAGUACGGЖCAGAUCUCUGAAGUGGUGGUUGUGAAAGЖCAGGGAGЖCCCAGAGAUCUCGGGGAUUUGGGUUUGUCACCUUUGAGAACAUUGACGACGCUAAGGAUGCCAUGAUGGCCAUGAAUGGGAAGUCUGUAGAUGGACGGCAGAUCCGAGUAGACCAGGCAGGCAAGUCGUCAGACAACCGAUCCCGUGGGUACCGUGGUGGCUCUGCCGGGGGCCGGGGCUUCUUCCGUGGGGGCCGAGGACGGGGCCGUGGGUUCUCUA#AGGAGGAGGGGACCGAGGCUAUGGGGGGAACCGGUUCGAGUCCAGGAGUGGGGGCUACGGAGGCUCCAGAGACUACUAUAGCAGCCGGAGUCAGAGUGGUGGCUACAGUGACCGGAGCUCGGGCGGGUCCUACAGAGACAGUUAUGACAGUUACGGUAAGUCACACUCCGAGGGCGCCACGCUGCUGUGGCCUGCGGUGGGAGCUCGGUUCACCUUGGUGCCCUCUCCAAGCACUUUAGGCUGGACACUCAGACCUUGUCACUGUGCUUGCCCAGAAGAGGCGCAUCUGUCCUCUCAGAGCCAUUUCUAUCGCAGGACGCAAAAGCCAAAUGAGЖCUGACCAAAAAGGCAAGGGAGAGCGAGGGCCCGCUGGGCAGUCAGCUAGGUGCAUGUGUGGCCGCAGGCCAGCCUCCCUCGGCUGUGGGGGGUGGUUGCUCCCCGGCCGCAGGCCGCGCCCUGGUCUGGCCUCUGGGGUGAAGCUGCCUCUUGUUGCUUCGGUGCCUUUACACUGUGCCUGCUUCUUGUCCUCAGCUACACACAACGAGUAAAAACCCUUCCUGCUCAAGAUCGUCCUUCCAЖUGGCUGUGUGUUUAAЖGAUUGUGGGAGCUUCGCUGAACGUUAAUGUGUAGUAAAUGCACCUCCUUGUAUUCCCACUUUCGUAGUCAUUUCGGUUCUGAUCUUGUCAAACCCAGCCUGACCGCUUCUGACGCCGGGAUGGCCUCGUUACUAGACUUUUCUUUUUAAGGAAGUGCUGUUUUUUUUUGAGGGUUUUCAAAACAUUUUGAAAAGCAUUUACUUUUUUGACCACGAGCCAUGAGUUUUCAAAAAAAUCGGGGGUUGUGUGGGUUUUUGGUUUUUGUUUUAGUUUUUGGUUGCGUUGCCUUUUUUUUUUUAGUGGGGUUGGCCCCAUGAAGUGGGUGCCCCACUCACUUCUCUGAGAUCGAACGGЖCUGUGAAUCCGCUCUUUGUCGGAAGCUGAGCAAGCUGUGGCUUUUUUCCAACUCCGUGUGACGUUUCUGAGUGUAGUGUGGUAGGACCCCGGCGGGUGUGGCAGCAACUGCCCUGGAGCCCCAGCCCCUGCGUCCAUCUGUGCUGUGCGCCCCACAGUAGACGUGCAGACGUCCCUGAGAGGUUCUUGAAGAUGUUUAUUUAUAUUGUCCUUUUUUACUGGAAGACGUACGCAUACUCCAUCGAUGUUGUAUUUGCAGUGGCUGAGGAAUUCUUGUACGCAGUUUUCUUUGGCUPUACGAAGCCGAUUAAAAGACCGUGUGAAAUGAA
Sequence (SHORT NAMES ENCODING)	CCAGGAUGUGUAGGGGGCGGGGCCCGGCGGAAGCGUAUAUAAGGCCGGGCUCGGGGACGCCCCCCCCUCACUCGCGCGUUAGGAGGCUCGGGUCGUUGUGGUGCGCUGUCUUCCCGCUUGCGUCAGGGACCUGCCCGACUCAGUGGAAGCGGGGAGAGGUGGUGAGAGAUGACCCCUGUUGAGGAUUUCAUUGGUGUCUGCCACAGGCCGCCAUGGCAUCAGAUGAAGGCAAACUUUUUGUUGGAGGGCUGAGUUUUGACACCAAUGAGCAGUCGCUGGAGCAGGUCUUCUCAAAGUACGGm6ACAGAUCUCUGAAGUGGUGGUUGUGAAAGm6ACAGGGAGm6ACCCAGAGAUCUCGGGGAUUUGGGUUUGUCACCUUUGAGAACAUUGACGACGCUAAGGAUGCCAUGAUGGCCAUGAAUGGGAAGUCUGUAGAUGGACGGCAGAUCCGAGUAGACCAGGCAGGCAAGUCGUCAGACAACCGAUCCCGUGGGUACCGUGGUGGCUCUGCCGGGGGCCGGGGCUUCUUCCGUGGGGGCCGAGGACGGGGCCGUGGGUUCUCUAGmAGGAGGAGGGGACCGAGGCUAUGGGGGGAACCGGUUCGAGUCCAGGAGUGGGGGCUACGGAGGCUCCAGAGACUACUAUAGCAGCCGGAGUCAGAGUGGUGGCUACAGUGACCGGAGCUCGGGCGGGUCCUACAGAGACAGUUAUGACAGUUACGGUAAGUCACACUCCGAGGGCGCCACGCUGCUGUGGCCUGCGGUGGGAGCUCGGUUCACCUUGGUGCCCUCUCCAAGCACUUUAGGCUGGACACUCAGACCUUGUCACUGUGCUUGCCCAGAAGAGGCGCAUCUGUCCUCUCAGAGCCAUUUCUAUCGCAGGACGCAAAAGCCAAAUGAGm6ACUGACCAAAAAGGCAAGGGAGAGCGAGGGCCCGCUGGGCAGUCAGCUAGGUGCAUGUGUGGCCGCAGGCCAGCCUCCCUCGGCUGUGGGGGGUGGUUGCUCCCCGGCCGCAGGCCGCGCCCUGGUCUGGCCUCUGGGGUGAAGCUGCCUCUUGUUGCUUCGGUGCCUUUACACUGUGCCUGCUUCUUGUCCUCAGCUACACACAACGAGUAAAAACCCUUCCUGCUCAAGAUCGUCCUUCCAm6AUGGCUGUGUGUUUAAm6AGAUUGUGGGAGCUUCGCUGAACGUUAAUGUGUAGUAAAUGCACCUCCUUGUAUUCCCACUUUCGUAGUCAUUUCGGUUCUGAUCUUGUCAAACCCAGCCUGACCGCUUCUGACGCCGGGAUGGCCUCGUUACUAGACUUUUCUUUUUAAGGAAGUGCUGUUUUUUUUUGAGGGUUUUCAAAACAUUUUGAAAAGCAUUUACUUUUUUGACCACGAGCCAUGAGUUUUCAAAAAAAUCGGGGGUUGUGUGGGUUUUUGGUUUUUGUUUUAGUUUUUGGUUGCGUUGCCUUUUUUUUUUUAGUGGGGUUGGCCCCAUGAAGUGGGUGCCCCACUCACUUCUCUGAGAUCGAACGGm6ACUGUGAAUCCGCUCUUUGUCGGAAGCUGAGCAAGCUGUGGCUUUUUUCCAACUCCGUGUGACGUUUCUGAGUGUAGUGUGGUAGGACCCCGGCGGGUGUGGCAGCAACUGCCCUGGAGCCCCAGCCCCUGCGUCCAUCUGUGCUGUGCGCCCCACAGUAGACGUGCAGACGUCCCUGAGAGGUUCUUGAAGAUGUUUAUUUAUAUUGUCCUUUUUUACUGGAAGACGUACGCAUACUCCAUCGAUGUUGUAUUUGCAGUGGCUGAGGAAUUCUUGUACGCAGUUUUCUUUGGCUYUACGAAGCCGAUUAAAAGACCGUGUGAAAUGAA
Sequence (MODOMICS CODE ENCODING)	CCAGGAUGUGUAGGGGGCGGGGCCCGGCGGAAGCGUAUAUAAGGCCGGGCUCGGGGACGCCCCCCCCUCACUCGCGCGUUAGGAGGCUCGGGUCGUUGUGGUGCGCUGUCUUCCCGCUUGCGUCAGGGACCUGCCCGACUCAGUGGAAGCGGGGAGAGGUGGUGAGAGAUGACCCCUGUUGAGGAUUUCAUUGGUGUCUGCCACAGGCCGCCAUGGCAUCAGAUGAAGGCAAACUUUUUGUUGGAGGGCUGAGUUUUGACACCAAUGAGCAGUCGCUGGAGCAGGUCUUCUCAAAGUACGG2000000006ACAGAUCUCUGAAGUGGUGGUUGUGAAAG2000000006ACAGGGAG2000000006ACCCAGAGAUCUCGGGGAUUUGGGUUUGUCACCUUUGAGAACAUUGACGACGCUAAGGAUGCCAUGAUGGCCAUGAAUGGGAAGUCUGUAGAUGGACGGCAGAUCCGAGUAGACCAGGCAGGCAAGUCGUCAGACAACCGAUCCCGUGGGUACCGUGGUGGCUCUGCCGGGGGCCGGGGCUUCUUCCGUGGGGGCCGAGGACGGGGCCGUGGGUUCUCUA2000000090GAGGAGGAGGGGACCGAGGCUAUGGGGGGAACCGGUUCGAGUCCAGGAGUGGGGGCUACGGAGGCUCCAGAGACUACUAUAGCAGCCGGAGUCAGAGUGGUGGCUACAGUGACCGGAGCUCGGGCGGGUCCUACAGAGACAGUUAUGACAGUUACGGUAAGUCACACUCCGAGGGCGCCACGCUGCUGUGGCCUGCGGUGGGAGCUCGGUUCACCUUGGUGCCCUCUCCAAGCACUUUAGGCUGGACACUCAGACCUUGUCACUGUGCUUGCCCAGAAGAGGCGCAUCUGUCCUCUCAGAGCCAUUUCUAUCGCAGGACGCAAAAGCCAAAUGAG2000000006ACUGACCAAAAAGGCAAGGGAGAGCGAGGGCCCGCUGGGCAGUCAGCUAGGUGCAUGUGUGGCCGCAGGCCAGCCUCCCUCGGCUGUGGGGGGUGGUUGCUCCCCGGCCGCAGGCCGCGCCCUGGUCUGGCCUCUGGGGUGAAGCUGCCUCUUGUUGCUUCGGUGCCUUUACACUGUGCCUGCUUCUUGUCCUCAGCUACACACAACGAGUAAAAACCCUUCCUGCUCAAGAUCGUCCUUCCA2000000006AUGGCUGUGUGUUUAA2000000006AGAUUGUGGGAGCUUCGCUGAACGUUAAUGUGUAGUAAAUGCACCUCCUUGUAUUCCCACUUUCGUAGUCAUUUCGGUUCUGAUCUUGUCAAACCCAGCCUGACCGCUUCUGACGCCGGGAUGGCCUCGUUACUAGACUUUUCUUUUUAAGGAAGUGCUGUUUUUUUUUGAGGGUUUUCAAAACAUUUUGAAAAGCAUUUACUUUUUUGACCACGAGCCAUGAGUUUUCAAAAAAAUCGGGGGUUGUGUGGGUUUUUGGUUUUUGUUUUAGUUUUUGGUUGCGUUGCCUUUUUUUUUUUAGUGGGGUUGGCCCCAUGAAGUGGGUGCCCCACUCACUUCUCUGAGAUCGAACGG2000000006ACUGUGAAUCCGCUCUUUGUCGGAAGCUGAGCAAGCUGUGGCUUUUUUCCAACUCCGUGUGACGUUUCUGAGUGUAGUGUGGUAGGACCCCGGCGGGUGUGGCAGCAACUGCCCUGGAGCCCCAGCCCCUGCGUCCAUCUGUGCUGUGCGCCCCACAGUAGACGUGCAGACGUCCCUGAGAGGUUCUUGAAGAUGUUUAUUUAUAUUGUCCUUUUUUACUGGAAGACGUACGCAUACUCCAUCGAUGUUGUAUUUGCAGUGGCUGAGGAAUUCUUGUACGCAGUUUUCUUUGGCU2000000009UUACGAAGCCGAUUAAAAGACCGUGUGAAAUGAA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	302	331	339	559	894	1137	1153	1507	1802
Modification Positions	m6A	m6A	m6A	Gm	m6A	m6A	m6A	m6A	Y
Genomic Coordinates	19:1271023:+	19:1271155:+	19:1271163:+	19:1271465:+	19:1272231:+	19:1272474:+	19:1272490:+	19:1272844:+	19:1273139:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	8cMbzB4aD5Se KTLz8piFYdwC BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	ArijeGVTwYBw KTLz8piFYdwC BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	ArijeGVTwYBw WiQcrNTGZHPT BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	jaSvBXBkn3xs YkSG92k4EHDM	6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL Yfn77uLS5tv8	834aFpha8RvT dA7YoLwHrzgR JASnTTw2HeNE ksEP666umrV9 NKGM8wdLLrnu ZuM5xpZmNuDL	834aFpha8RvT dA7YoLwHrzgR JASnTTw2HeNE ksEP666umrV9 NKGM8wdLLrnu ZuM5xpZmNuDL	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn D6ncpa2PPWj3 8cMbzB4aD5Se ArijeGVTwYBw KTLz8piFYdwC WiQcrNTGZHPT BsCW7emuRX7M KENzb7mwdBd9 Lny8GcCeVGc9 LZJKems7W2wi XUkp6ghERQML BtsJQJ3DteUq bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP f6YSioLdAWpr kx7BHU7ZycYE Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8