General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000590060
Gene ID:	ENSG00000099817
Gene Name:	POLR2E
Sequence (UNICHARACTER ENCODING)	CCUGCCUCAGCCUCCCAAAGUGCUAGGAUUACAGAGGAGCCCAAGGUGGGCAUCAAGACCAUCAAGGUGUACUGCCAGCGCAUGCAGGAGGAGAACAUCACACGGGCUCUCAUCGUGGUGCAGCAGGGCAUGACACCCPCCGCCAAGCAGUCCCUGGUCGACAUGGCCCCCAAGUACAPCCUGGAGCAGUUUCUGCAGCAGGAGCUGCUCAUCAACAUCACGGAGCACGAGUCCCUGAGCACGUCGUCAUGACCAAGGAGGAGGUGACAGAGCUGCUGGCCCGAUAUAAGCUCCGAGAGAACCAGCUGCCCAGGAUCCAGGCGGGGGACCCUGUGGCGCGCUACUUUGGGAUAAAGCGUGGGCAGGUGGUGAAGAUCAPCCGGCCCAGUGAGACGGCUGGCAGGUACAUCACCUACCGGCUGGUGCAGUAGCUACCGCCUGACAGCCCCUAGAGGCGGACACACAGCGACCCCCAPCCCUGCAGGЖCAAACGCCCCUGCCCUGCCAGAAUCCGGCCCCCACAGCUCUCACGGCUGCUGCUCCUCUGGACUCCCCAAGAAACCAGGCCGACUAACAAGGUUUCCAGCAGGUGGCCUUGCCUCACCCCAAGCACACGAGGUCAGCCUGGCAGGUGUGCCCUCCUCGCGCUGGCUUCAGGGUUCCACAGGCGCAUGGGCCACGUUUCCAGUGCUUGGUGGCCAUGUGGGGCUGACGUGCGAAACCUUAGAGCCGGGGGAUACGUCCGUCAUCGAGAACGUUUUCCUGGЖCUGCCCUGGGCUGCAGGUGGACGUGACGAGGUCAUUCGAUGCCUGACCGUCUGCACAGCCUGUGGUGAAGACCACCCGGGCUCCCACCUCGCGGGGCCCCGUGGCGGGGGGUUCCCUUCCUCACACAPCCCUCCCCUAGGGGGAGGCCCAGGGCCACGCCACGGGGCUCUCUCUGUCCCCUCCCUGGCCCCUUCUUCUAAGCUUGCAGCUGCCACAGAAAAUCUUCUAAGCUUGCAGCUGCCACAGAAAACACCCGAUUAAAAЖCUUUUUAUUUCAGCAAAAUAAA
Sequence (SHORT NAMES ENCODING)	CCUGCCUCAGCCUCCCAAAGUGCUAGGAUUACAGAGGAGCCCAAGGUGGGCAUCAAGACCAUCAAGGUGUACUGCCAGCGCAUGCAGGAGGAGAACAUCACACGGGCUCUCAUCGUGGUGCAGCAGGGCAUGACACCCYCCGCCAAGCAGUCCCUGGUCGACAUGGCCCCCAAGUACAYCCUGGAGCAGUUUCUGCAGCAGGAGCUGCUCAUCAACAUCACGGAGCACGAGUCCCUGAGCACGUCGUCAUGACCAAGGAGGAGGUGACAGAGCUGCUGGCCCGAUAUAAGCUCCGAGAGAACCAGCUGCCCAGGAUCCAGGCGGGGGACCCUGUGGCGCGCUACUUUGGGAUAAAGCGUGGGCAGGUGGUGAAGAUCAYCCGGCCCAGUGAGACGGCUGGCAGGUACAUCACCUACCGGCUGGUGCAGUAGCUACCGCCUGACAGCCCCUAGAGGCGGACACACAGCGACCCCCAYCCCUGCAGGm6ACAAACGCCCCUGCCCUGCCAGAAUCCGGCCCCCACAGCUCUCACGGCUGCUGCUCCUCUGGACUCCCCAAGAAACCAGGCCGACUAACAAGGUUUCCAGCAGGUGGCCUUGCCUCACCCCAAGCACACGAGGUCAGCCUGGCAGGUGUGCCCUCCUCGCGCUGGCUUCAGGGUUCCACAGGCGCAUGGGCCACGUUUCCAGUGCUUGGUGGCCAUGUGGGGCUGACGUGCGAAACCUUAGAGCCGGGGGAUACGUCCGUCAUCGAGAACGUUUUCCUGGm6ACUGCCCUGGGCUGCAGGUGGACGUGACGAGGUCAUUCGAUGCCUGACCGUCUGCACAGCCUGUGGUGAAGACCACCCGGGCUCCCACCUCGCGGGGCCCCGUGGCGGGGGGUUCCCUUCCUCACACAYCCCUCCCCUAGGGGGAGGCCCAGGGCCACGCCACGGGGCUCUCUCUGUCCCCUCCCUGGCCCCUUCUUCUAAGCUUGCAGCUGCCACAGAAAAUCUUCUAAGCUUGCAGCUGCCACAGAAAACACCCGAUUAAAAm6ACUUUUUAUUUCAGCAAAAUAAA
Sequence (MODOMICS CODE ENCODING)	CCUGCCUCAGCCUCCCAAAGUGCUAGGAUUACAGAGGAGCCCAAGGUGGGCAUCAAGACCAUCAAGGUGUACUGCCAGCGCAUGCAGGAGGAGAACAUCACACGGGCUCUCAUCGUGGUGCAGCAGGGCAUGACACCC2000000009UCCGCCAAGCAGUCCCUGGUCGACAUGGCCCCCAAGUACA2000000009UCCUGGAGCAGUUUCUGCAGCAGGAGCUGCUCAUCAACAUCACGGAGCACGAGUCCCUGAGCACGUCGUCAUGACCAAGGAGGAGGUGACAGAGCUGCUGGCCCGAUAUAAGCUCCGAGAGAACCAGCUGCCCAGGAUCCAGGCGGGGGACCCUGUGGCGCGCUACUUUGGGAUAAAGCGUGGGCAGGUGGUGAAGAUCA2000000009UCCGGCCCAGUGAGACGGCUGGCAGGUACAUCACCUACCGGCUGGUGCAGUAGCUACCGCCUGACAGCCCCUAGAGGCGGACACACAGCGACCCCCA2000000009UCCCUGCAGG2000000006ACAAACGCCCCUGCCCUGCCAGAAUCCGGCCCCCACAGCUCUCACGGCUGCUGCUCCUCUGGACUCCCCAAGAAACCAGGCCGACUAACAAGGUUUCCAGCAGGUGGCCUUGCCUCACCCCAAGCACACGAGGUCAGCCUGGCAGGUGUGCCCUCCUCGCGCUGGCUUCAGGGUUCCACAGGCGCAUGGGCCACGUUUCCAGUGCUUGGUGGCCAUGUGGGGCUGACGUGCGAAACCUUAGAGCCGGGGGAUACGUCCGUCAUCGAGAACGUUUUCCUGG2000000006ACUGCCCUGGGCUGCAGGUGGACGUGACGAGGUCAUUCGAUGCCUGACCGUCUGCACAGCCUGUGGUGAAGACCACCCGGGCUCCCACCUCGCGGGGCCCCGUGGCGGGGGGUUCCCUUCCUCACACA2000000009UCCCUCCCCUAGGGGGAGGCCCAGGGCCACGCCACGGGGCUCUCUCUGUCCCCUCCCUGGCCCCUUCUUCUAAGCUUGCAGCUGCCACAGAAAAUCUUCUAAGCUUGCAGCUGCCACAGAAAACACCCGAUUAAAA2000000006ACUUUUUAUUUCAGCAAAAUAAA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	139	179	379	476	486	766	894	1030
Modification Positions	Y	Y	Y	Y	m6A	m6A	Y	m6A
Genomic Coordinates	19:1091803:-	19:1090960:-	19:1089538:-	19:1088690:-	19:1088680:-	19:1086881:-	19:1086753:-	19:1086617:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr kx7BHU7ZycYE oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr kx7BHU7ZycYE oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr kx7BHU7ZycYE oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr kx7BHU7ZycYE Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	8cMbzB4aD5Se KTLz8piFYdwC WiQcrNTGZHPT BtsJQJ3DteUq bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr kx7BHU7ZycYE Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	3TeAZFYFxgvp 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BsCW7emuRX7M Lny8GcCeVGc9 LZJKems7W2wi Yfn77uLS5tv8	dknfVe6BK8aP Yfn77uLS5tv8	aivdrAsbdKEU msuJfBpJvM5H QmcpiJ88DBDn VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BsCW7emuRX7M Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G XUkp6ghERQML