General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000316939
Gene ID:	ENSG00000179271
Gene Name:	GADD45GIP1
Sequence (UNICHARACTER ENCODING)	GCACAGCCAAGAUGGCGGCGUCCGUGCGACAGGCACGCAGCCUACUAGGUGUGGCGGCGACCCUGGCCCCGGGUUCCCGUGGCUACCGGGCGCGGCCGCCCCCGCGCCGCAGGCCGGGACCCCGGUGGCCAGACCCCGAGGACCUCCUGACCCCGCGGUGGCAGCUGGGACCGCGCUACGCGGCUAAGCAGUUCGCGCGUUACGGCGCCGCCPCCGGGGUGGUCCCCGGUUCGUUAUGGCCGUCGCCGGAGCAGCUGCGGGAGCUGGAGGCCGAAGAACGCGAAUGGUACCCGЖGCCUGGCGACCAUGCAGGAGUCGCUGCGGGUGAAGCAGCUGGCCGAAGAGCAGAAGCGUCGGGAGA#GGAGCAGCACAUCGCAGAGUGCAUGGCCAAGAUGCCACAGAUGAUUGUGAACUGGCAGCAGCAGCAGCGGGAGAACUGGGAGAAGGCCCAGGCUGACAAGGAGAGGAGGGCCCGACUGCAGGCUGAGGCCCAGGAGCUCCUGGGCUACCAGGUGGACCCAAGGAGUGCCCGCUUCCAGGAGCUGCUCCAGGACCUAGAGAAGAAGGAGCGCAAGCGCCUCAAGGAGGAAAAACAGAAACGGAAGAAGGAGGCGCGAGCUGCUGCAUUGGCUGCAGCUGUGGCUCAAGЖCCCAGCAGCCUCUGGGGCACCCAGCUCCUGAGGCUUUGUCCCUUCCCAAUAAAGCCUGCUACCUGGCAGUACCCCUGAAGAGAUCUGCGUCCUCUCAAGGUGUGCCUCUCUGGGUCCCCUGGUUCCUCCCCCAAUACUUAAGAGCUGGGGAAUCCCCCACUUGGCUGUACUCAAAAGGGGACAGGGЖCUCUAGGCCCUGCUGACUAЖCUGGGGCUUCAGUGGGAGGAAAAGGGGGGUGUACAAUGGGCAAAUAAUGGAGAAGCAGAUGGCAGAAGAGAAGAAGGCUUCUGUUUACCAACAUUCAUCUCCAGUAAUUAGCCAAUUACAAGGCUGGUGGGGGGGGAAGUAUAGCCAAAACAGACUGUGGUGAUGAUGGUGGGGGCCGGGGAGAAGCAGUCCUUGUAACGUUGGGCUGGGGUCCACUGCCUGGAAAUGACACACUGGGGGAGGAGACACCGGAAGCCUCAAUCUGCAGGGЖCUCACAGЖCUCCUCUCCCCCUUCCAGGCACCCGUCACCAUGCCUGCCUGUGCCCAGCCAGCCCCCCAAGACCCAGACAGGUGGGCGCGGGGAGCCCCAGCAGGCACAGACCAUAGGGCUAGUUUUUAAAACUPUAUUCACUUCAAAACCUPUAUCAGAGACACGGUUCUGUUCUGGGGUGGGGGUGGCCUUGACAAUGAGCUGAUGUUAGCCCUUCUCCAGGCUGGAGGCCAAGGCCAGACUGGGGAGGGGGCCUUGGGCCUUUCAGGЖCUUGCCCUAGAUGGAAAGAUUUGGGCCACUCCAAUGGAGGAUCAAAGUUGGGGCUCCAGCUUCCCCUCAPCCUAGAAGAGGAUGGGGGGGGGUCCUCAGGGGUUUUUCGGAGGAUGGAGAGGCAAGCAGCCGCCUUUCCGUCUGGCUGCAGAGAGCUGGGACAGAGGCCAAGAGGGGCCCAUCUGUCGCCUCCCAGUCCUGCCAGCUUCUCUGAGCAGGCUGGGCUGGGGAGGAGGACGGGGGGACAGCUGUCUGGCCCGGGAGAUGGGAACAGGGGCCACUPUAGGAGGACAGGAAGCUGGACUGUUUGCUUGUUUUUUUAAGAUUUUUGAUUUUUUUUUCCAUUUCUUAAAUAAACAUGAAUAUAUAUAUA
Sequence (SHORT NAMES ENCODING)	GCACAGCCAAGAUGGCGGCGUCCGUGCGACAGGCACGCAGCCUACUAGGUGUGGCGGCGACCCUGGCCCCGGGUUCCCGUGGCUACCGGGCGCGGCCGCCCCCGCGCCGCAGGCCGGGACCCCGGUGGCCAGACCCCGAGGACCUCCUGACCCCGCGGUGGCAGCUGGGACCGCGCUACGCGGCUAAGCAGUUCGCGCGUUACGGCGCCGCCYCCGGGGUGGUCCCCGGUUCGUUAUGGCCGUCGCCGGAGCAGCUGCGGGAGCUGGAGGCCGAAGAACGCGAAUGGUACCCGm6AGCCUGGCGACCAUGCAGGAGUCGCUGCGGGUGAAGCAGCUGGCCGAAGAGCAGAAGCGUCGGGAGAGmGGAGCAGCACAUCGCAGAGUGCAUGGCCAAGAUGCCACAGAUGAUUGUGAACUGGCAGCAGCAGCAGCGGGAGAACUGGGAGAAGGCCCAGGCUGACAAGGAGAGGAGGGCCCGACUGCAGGCUGAGGCCCAGGAGCUCCUGGGCUACCAGGUGGACCCAAGGAGUGCCCGCUUCCAGGAGCUGCUCCAGGACCUAGAGAAGAAGGAGCGCAAGCGCCUCAAGGAGGAAAAACAGAAACGGAAGAAGGAGGCGCGAGCUGCUGCAUUGGCUGCAGCUGUGGCUCAAGm6ACCCAGCAGCCUCUGGGGCACCCAGCUCCUGAGGCUUUGUCCCUUCCCAAUAAAGCCUGCUACCUGGCAGUACCCCUGAAGAGAUCUGCGUCCUCUCAAGGUGUGCCUCUCUGGGUCCCCUGGUUCCUCCCCCAAUACUUAAGAGCUGGGGAAUCCCCCACUUGGCUGUACUCAAAAGGGGACAGGGm6ACUCUAGGCCCUGCUGACUAm6ACUGGGGCUUCAGUGGGAGGAAAAGGGGGGUGUACAAUGGGCAAAUAAUGGAGAAGCAGAUGGCAGAAGAGAAGAAGGCUUCUGUUUACCAACAUUCAUCUCCAGUAAUUAGCCAAUUACAAGGCUGGUGGGGGGGGAAGUAUAGCCAAAACAGACUGUGGUGAUGAUGGUGGGGGCCGGGGAGAAGCAGUCCUUGUAACGUUGGGCUGGGGUCCACUGCCUGGAAAUGACACACUGGGGGAGGAGACACCGGAAGCCUCAAUCUGCAGGGm6ACUCACAGm6ACUCCUCUCCCCCUUCCAGGCACCCGUCACCAUGCCUGCCUGUGCCCAGCCAGCCCCCCAAGACCCAGACAGGUGGGCGCGGGGAGCCCCAGCAGGCACAGACCAUAGGGCUAGUUUUUAAAACUYUAUUCACUUCAAAACCUYUAUCAGAGACACGGUUCUGUUCUGGGGUGGGGGUGGCCUUGACAAUGAGCUGAUGUUAGCCCUUCUCCAGGCUGGAGGCCAAGGCCAGACUGGGGAGGGGGCCUUGGGCCUUUCAGGm6ACUUGCCCUAGAUGGAAAGAUUUGGGCCACUCCAAUGGAGGAUCAAAGUUGGGGCUCCAGCUUCCCCUCAYCCUAGAAGAGGAUGGGGGGGGGUCCUCAGGGGUUUUUCGGAGGAUGGAGAGGCAAGCAGCCGCCUUUCCGUCUGGCUGCAGAGAGCUGGGACAGAGGCCAAGAGGGGCCCAUCUGUCGCCUCCCAGUCCUGCCAGCUUCUCUGAGCAGGCUGGGCUGGGGAGGAGGACGGGGGGACAGCUGUCUGGCCCGGGAGAUGGGAACAGGGGCCACUYUAGGAGGACAGGAAGCUGGACUGUUUGCUUGUUUUUUUAAGAUUUUUGAUUUUUUUUUCCAUUUCUUAAAUAAACAUGAAUAUAUAUAUA
Sequence (MODOMICS CODE ENCODING)	GCACAGCCAAGAUGGCGGCGUCCGUGCGACAGGCACGCAGCCUACUAGGUGUGGCGGCGACCCUGGCCCCGGGUUCCCGUGGCUACCGGGCGCGGCCGCCCCCGCGCCGCAGGCCGGGACCCCGGUGGCCAGACCCCGAGGACCUCCUGACCCCGCGGUGGCAGCUGGGACCGCGCUACGCGGCUAAGCAGUUCGCGCGUUACGGCGCCGCC2000000009UCCGGGGUGGUCCCCGGUUCGUUAUGGCCGUCGCCGGAGCAGCUGCGGGAGCUGGAGGCCGAAGAACGCGAAUGGUACCCG2000000006AGCCUGGCGACCAUGCAGGAGUCGCUGCGGGUGAAGCAGCUGGCCGAAGAGCAGAAGCGUCGGGAGA2000000090GGGAGCAGCACAUCGCAGAGUGCAUGGCCAAGAUGCCACAGAUGAUUGUGAACUGGCAGCAGCAGCAGCGGGAGAACUGGGAGAAGGCCCAGGCUGACAAGGAGAGGAGGGCCCGACUGCAGGCUGAGGCCCAGGAGCUCCUGGGCUACCAGGUGGACCCAAGGAGUGCCCGCUUCCAGGAGCUGCUCCAGGACCUAGAGAAGAAGGAGCGCAAGCGCCUCAAGGAGGAAAAACAGAAACGGAAGAAGGAGGCGCGAGCUGCUGCAUUGGCUGCAGCUGUGGCUCAAG2000000006ACCCAGCAGCCUCUGGGGCACCCAGCUCCUGAGGCUUUGUCCCUUCCCAAUAAAGCCUGCUACCUGGCAGUACCCCUGAAGAGAUCUGCGUCCUCUCAAGGUGUGCCUCUCUGGGUCCCCUGGUUCCUCCCCCAAUACUUAAGAGCUGGGGAAUCCCCCACUUGGCUGUACUCAAAAGGGGACAGGG2000000006ACUCUAGGCCCUGCUGACUA2000000006ACUGGGGCUUCAGUGGGAGGAAAAGGGGGGUGUACAAUGGGCAAAUAAUGGAGAAGCAGAUGGCAGAAGAGAAGAAGGCUUCUGUUUACCAACAUUCAUCUCCAGUAAUUAGCCAAUUACAAGGCUGGUGGGGGGGGAAGUAUAGCCAAAACAGACUGUGGUGAUGAUGGUGGGGGCCGGGGAGAAGCAGUCCUUGUAACGUUGGGCUGGGGUCCACUGCCUGGAAAUGACACACUGGGGGAGGAGACACCGGAAGCCUCAAUCUGCAGGG2000000006ACUCACAG2000000006ACUCCUCUCCCCCUUCCAGGCACCCGUCACCAUGCCUGCCUGUGCCCAGCCAGCCCCCCAAGACCCAGACAGGUGGGCGCGGGGAGCCCCAGCAGGCACAGACCAUAGGGCUAGUUUUUAAAACU2000000009UUAUUCACUUCAAAACCU2000000009UUAUCAGAGACACGGUUCUGUUCUGGGGUGGGGGUGGCCUUGACAAUGAGCUGAUGUUAGCCCUUCUCCAGGCUGGAGGCCAAGGCCAGACUGGGGAGGGGGCCUUGGGCCUUUCAGG2000000006ACUUGCCCUAGAUGGAAAGAUUUGGGCCACUCCAAUGGAGGAUCAAAGUUGGGGCUCCAGCUUCCCCUCA2000000009UCCUAGAAGAGGAUGGGGGGGGGUCCUCAGGGGUUUUUCGGAGGAUGGAGAGGCAAGCAGCCGCCUUUCCGUCUGGCUGCAGAGAGCUGGGACAGAGGCCAAGAGGGGCCCAUCUGUCGCCUCCCAGUCCUGCCAGCUUCUCUGAGCAGGCUGGGCUGGGGAGGAGGACGGGGGGACAGCUGUCUGGCCCGGGAGAUGGGAACAGGGGCCACU2000000009UUAGGAGGACAGGAAGCUGGACUGUUUGCUUGUUUUUUUAAGAUUUUUGAUUUUUUUUUCCAUUUCUUAAAUAAACAUGAAUAUAUAUAUA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	213	294	361	649	836	856	1127	1135	1260	1278	1396	1466	1679
Modification Positions	Y	m6A	Gm	m6A	m6A	m6A	m6A	m6A	Y	Y	m6A	Y	Y
Genomic Coordinates	19:12957011:-	19:12956930:-	19:12956863:-	19:12954239:-	19:12954052:-	19:12954032:-	19:12953761:-	19:12953753:-	19:12953628:-	19:12953610:-	19:12953492:-	19:12953422:-	19:12953209:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr kx7BHU7ZycYE Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	834aFpha8RvT dA7YoLwHrzgR JASnTTw2HeNE ksEP666umrV9 NKGM8wdLLrnu ZuM5xpZmNuDL	jaSvBXBkn3xs YkSG92k4EHDM	Q36pf44ZRvxu BtsJQJ3DteUq bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr kx7BHU7ZycYE Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	3TeAZFYFxgvp 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Yfn77uLS5tv8	6AyXsheySjfx aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd NjZ8bGGJsNSR QmcpiJ88DBDn QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Yfn77uLS5tv8	3TeAZFYFxgvp 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn dknfVe6BK8aP Yfn77uLS5tv8	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn dknfVe6BK8aP Yfn77uLS5tv8	dknfVe6BK8aP Yfn77uLS5tv8	dknfVe6BK8aP Yfn77uLS5tv8	6AyXsheySjfx aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR UN3tNpbCPHYf VL7zkHvkfkoB WdHxkJGRmFxn Lny8GcCeVGc9 UKen6WEino9G dknfVe6BK8aP Yfn77uLS5tv8	dknfVe6BK8aP Yfn77uLS5tv8	dknfVe6BK8aP Yfn77uLS5tv8