General Data

RNA Type	lncRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000651681
Gene ID:	ENSG00000232677
Gene Name:	LINC00665
Sequence (UNICHARACTER ENCODING)	GGAAGCCCGCCCUCCCAUUUCCGGAAGCCUGGCGCAAGGUUGGUCUGCAGGUGGCCUCCAGGUGCAAAGUGGGAAGUGUGAGUCCUCAGUCUUGGGCUAUUCGGCCACGUGCCUGCCGGACAUGGGACGCUGGAGGGUCAGCAGCGUGGAGUCCUGGCCUUUUGCGUCCACGGGUGGGAAAUUGGCCAUUGCCACGGCGGGAACUGGGACUCAGGCUGCCCCCCGGCCGUUUCUCAUCCGUCCACCGGACUCGUGGGCGCUCGCACUGGCGCUGAUGUAGUUUCCUGACCUCUGACCCGUAUUGUCUCCAGAUUAAAGGUACGACAUUUGGAGGCCCCAGCGAGAAACGUCACCGGGAGAAACGUCACCGGGCGAGAGCCGGGCCCGCUGUGUGCUCCCCCGGAAGGACAGCCAGCUUGUAGGGGGGAGUGCCACCUGAAAAAAAAAUUUCCAGGUCCCCAAAGGGUGACCGUCUUCCGGAGGACAGCGGAUCGACUACCAUGUGGGUGCCCACAAAAAUUCCACCUCUGAGUCCUCAACUGCUGACCCCGGGGUCAGUUCCAGAGAGAAGGACUCCCUCCUGCUUGGAAGAGACCUCACACCGUCAUCACGAUGCCAACGGCUCUGAAGGUGGAUGGCAUUCCUGCGUGGAUUCAUCACUCCCGCAUCAAAAAGGCCAACGGAGCCCAACUAGAAACAUGGGPCCCCAGGGCUGGGUCAGGCCCCUUAAAACUGCACCUAAGUUGGGUGAAGCCAUUAGAUUAAUUCUUUUUCUUAAUUUUGUAAAACAAUGCAUAGCUUCUGUCAAACUUAUGUAUCUUAAGACUCAAUAUAACCCCCUUGUUAUAACUGAGGAAUCAAUGAUUUGAUUCCCCAAAAACACAAGUGGGGAAUGUAGUGUCCAACCUGGUUUUUACUAACCCUGUUUUUAGACUCUCCCUUUCCUPUAAUCACUCAGCCUUGUUUCCACCUGAAUUGACUCUCCCUUAGCUAAGAGCGCCAGAUGGACUCCAUCUUGGCUCUUUCACUGGCAGCCGCUUCCUCAAGGЖCUUAЖCUUGUGCAAGCUGACUCCCAGCACAPCCAAGAAUGCAAUUAЖCUGAUAAGAUACUGUGGCAAGCUAUAUCCGCAGUUCCCAGGAAUUCGUCCAAUUGAUUACACCCAAAAGCCCCGCGUCUAUCACCUUGUAAUAAUCUUAAAGCCCCUGCACCUGGAACUAUUAACGUUCCUGUAACCAUUUAUCCUUUUAACUUUUUUGCCUACUPUAUUUCUGUAAAAUUGUUUUAЖCUAGACCCCCCCUCUCCUUUCUAAACCAAAGUAUAAAAGCAAAUCUAGCCCCUUCUUCAGGCCGAGAGAAUUUCGAGCGUUAGCCGUCUCUUGGCCACCAGCUAAAUAAACGGAUUCUUCAUGUGUCUCAAA
Sequence (SHORT NAMES ENCODING)	GGAAGCCCGCCCUCCCAUUUCCGGAAGCCUGGCGCAAGGUUGGUCUGCAGGUGGCCUCCAGGUGCAAAGUGGGAAGUGUGAGUCCUCAGUCUUGGGCUAUUCGGCCACGUGCCUGCCGGACAUGGGACGCUGGAGGGUCAGCAGCGUGGAGUCCUGGCCUUUUGCGUCCACGGGUGGGAAAUUGGCCAUUGCCACGGCGGGAACUGGGACUCAGGCUGCCCCCCGGCCGUUUCUCAUCCGUCCACCGGACUCGUGGGCGCUCGCACUGGCGCUGAUGUAGUUUCCUGACCUCUGACCCGUAUUGUCUCCAGAUUAAAGGUACGACAUUUGGAGGCCCCAGCGAGAAACGUCACCGGGAGAAACGUCACCGGGCGAGAGCCGGGCCCGCUGUGUGCUCCCCCGGAAGGACAGCCAGCUUGUAGGGGGGAGUGCCACCUGAAAAAAAAAUUUCCAGGUCCCCAAAGGGUGACCGUCUUCCGGAGGACAGCGGAUCGACUACCAUGUGGGUGCCCACAAAAAUUCCACCUCUGAGUCCUCAACUGCUGACCCCGGGGUCAGUUCCAGAGAGAAGGACUCCCUCCUGCUUGGAAGAGACCUCACACCGUCAUCACGAUGCCAACGGCUCUGAAGGUGGAUGGCAUUCCUGCGUGGAUUCAUCACUCCCGCAUCAAAAAGGCCAACGGAGCCCAACUAGAAACAUGGGYCCCCAGGGCUGGGUCAGGCCCCUUAAAACUGCACCUAAGUUGGGUGAAGCCAUUAGAUUAAUUCUUUUUCUUAAUUUUGUAAAACAAUGCAUAGCUUCUGUCAAACUUAUGUAUCUUAAGACUCAAUAUAACCCCCUUGUUAUAACUGAGGAAUCAAUGAUUUGAUUCCCCAAAAACACAAGUGGGGAAUGUAGUGUCCAACCUGGUUUUUACUAACCCUGUUUUUAGACUCUCCCUUUCCUYUAAUCACUCAGCCUUGUUUCCACCUGAAUUGACUCUCCCUUAGCUAAGAGCGCCAGAUGGACUCCAUCUUGGCUCUUUCACUGGCAGCCGCUUCCUCAAGGm6ACUUAm6ACUUGUGCAAGCUGACUCCCAGCACAYCCAAGAAUGCAAUUAm6ACUGAUAAGAUACUGUGGCAAGCUAUAUCCGCAGUUCCCAGGAAUUCGUCCAAUUGAUUACACCCAAAAGCCCCGCGUCUAUCACCUUGUAAUAAUCUUAAAGCCCCUGCACCUGGAACUAUUAACGUUCCUGUAACCAUUUAUCCUUUUAACUUUUUUGCCUACUYUAUUUCUGUAAAAUUGUUUUAm6ACUAGACCCCCCCUCUCCUUUCUAAACCAAAGUAUAAAAGCAAAUCUAGCCCCUUCUUCAGGCCGAGAGAAUUUCGAGCGUUAGCCGUCUCUUGGCCACCAGCUAAAUAAACGGAUUCUUCAUGUGUCUCAAA
Sequence (MODOMICS CODE ENCODING)	GGAAGCCCGCCCUCCCAUUUCCGGAAGCCUGGCGCAAGGUUGGUCUGCAGGUGGCCUCCAGGUGCAAAGUGGGAAGUGUGAGUCCUCAGUCUUGGGCUAUUCGGCCACGUGCCUGCCGGACAUGGGACGCUGGAGGGUCAGCAGCGUGGAGUCCUGGCCUUUUGCGUCCACGGGUGGGAAAUUGGCCAUUGCCACGGCGGGAACUGGGACUCAGGCUGCCCCCCGGCCGUUUCUCAUCCGUCCACCGGACUCGUGGGCGCUCGCACUGGCGCUGAUGUAGUUUCCUGACCUCUGACCCGUAUUGUCUCCAGAUUAAAGGUACGACAUUUGGAGGCCCCAGCGAGAAACGUCACCGGGAGAAACGUCACCGGGCGAGAGCCGGGCCCGCUGUGUGCUCCCCCGGAAGGACAGCCAGCUUGUAGGGGGGAGUGCCACCUGAAAAAAAAAUUUCCAGGUCCCCAAAGGGUGACCGUCUUCCGGAGGACAGCGGAUCGACUACCAUGUGGGUGCCCACAAAAAUUCCACCUCUGAGUCCUCAACUGCUGACCCCGGGGUCAGUUCCAGAGAGAAGGACUCCCUCCUGCUUGGAAGAGACCUCACACCGUCAUCACGAUGCCAACGGCUCUGAAGGUGGAUGGCAUUCCUGCGUGGAUUCAUCACUCCCGCAUCAAAAAGGCCAACGGAGCCCAACUAGAAACAUGGG2000000009UCCCCAGGGCUGGGUCAGGCCCCUUAAAACUGCACCUAAGUUGGGUGAAGCCAUUAGAUUAAUUCUUUUUCUUAAUUUUGUAAAACAAUGCAUAGCUUCUGUCAAACUUAUGUAUCUUAAGACUCAAUAUAACCCCCUUGUUAUAACUGAGGAAUCAAUGAUUUGAUUCCCCAAAAACACAAGUGGGGAAUGUAGUGUCCAACCUGGUUUUUACUAACCCUGUUUUUAGACUCUCCCUUUCCU2000000009UUAAUCACUCAGCCUUGUUUCCACCUGAAUUGACUCUCCCUUAGCUAAGAGCGCCAGAUGGACUCCAUCUUGGCUCUUUCACUGGCAGCCGCUUCCUCAAGG2000000006ACUUA2000000006ACUUGUGCAAGCUGACUCCCAGCACA2000000009UCCAAGAAUGCAAUUA2000000006ACUGAUAAGAUACUGUGGCAAGCUAUAUCCGCAGUUCCCAGGAAUUCGUCCAAUUGAUUACACCCAAAAGCCCCGCGUCUAUCACCUUGUAAUAAUCUUAAAGCCCCUGCACCUGGAACUAUUAACGUUCCUGUAACCAUUUAUCCUUUUAACUUUUUUGCCUACU2000000009UUAUUUCUGUAAAAUUGUUUUA2000000006ACUAGACCCCCCCUCUCCUUUCUAAACCAAAGUAUAAAAGCAAAUCUAGCCCCUUCUUCAGGCCGAGAGAAUUUCGAGCGUUAGCCGUCUCUUGGCCACCAGCUAAAUAAACGGAUUCUUCAUGUGUCUCAAA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	704	947	1049	1054	1080	1096	1262	1284
Modification Positions	Y	Y	m6A	m6A	Y	m6A	Y	m6A
Genomic Coordinates	19:36325619:-	19:36325376:-	19:36325274:-	19:36325269:-	19:36325243:-	19:36325227:-	19:36325061:-	19:36325039:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	VL7zkHvkfkoB BtsJQJ3DteUq dknfVe6BK8aP XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8