General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000302177
Gene ID:	ENSG00000170608
Gene Name:	FOXA3
Sequence (UNICHARACTER ENCODING)	GGGACAGCCGUACCCCGGGCGGUCGGACGGGCGGGCGCCGGUGGGAGCUCGGGCCGUGCCCGCUGAGAGAUCCAGAGCGCUCCGUUCCCCCGGGGCCGGAGCGGGGGCGGGUGGGGGCGUAAGCCCGGGGGAUGCUGGGCUCAGUGAAGAUGGAGGCCCAUGACCUGGCCGAGUGGAGCUACUACCCGGAGGCGGGCGAGGUCUACUCGCCGGUGACCCCAGUGCCCACCAUGGCCCCCCUCAACUCCUACAUGACCCUGAAUCCUCUAAGCUCUCCCUAUCCCCCUGGGGGGCUCCCUGCCUCCCCACUGCCCUCAGGACCCCUGGCACCCCCAGCACCUGCAGCCCCCCUGGGGCCCACUUUCCCAGGCCUGGGUGUCAGCGGUGGCAGCAGCAGCUCCGGGUACGGGGCCCCGGGUCCUGGGCUGGUGCACGGGAAGGAGAUGCCGAAGGGGUAUCGGCGGCCCCUGGCACACGCCAAGCCACCGUAUUCCUAUAUCUCACUCAUCACCAUGGCCAUCCAGCAGGCGCCGGGCAAGAUGCUGACCUUGAGUGAAAUCUACCAGUGGAUCAUGGЖCCUCUUCCCUUACUACCGGGAGAAUCAGCAGCGCUGGCAGAЖCUCCAUUCGCCACUCGCUGUCUUUCAACGЖCUGCUUCGUCAAGGUGGCGCGUUCCCCAGACAAGCCUGGCAAGGGCUCCUACUGGGCCCUACACCCCAGCUCAGGGAACAUGUUUGAGAAUGGCUGCUACCUGCGCCGCCAGAAACGCUUCAAGCUGGAGGAGAAGGUGAAAAAAGGGGGCAGCGGGGCUGCCACCACCACCAGGAACGGGЖCAGGGUCUGCUGCCUCGACCACCACCCCCGCGGCCACAGUCACCUCCCCGCCCCAGCCCCCGCCUCCAGCCCCUGAGCCUGAGGCCCAGGGCGGGGAAGAUGUGGGGGCUCUGGЖCUGUGGCUCACCCGCUUCCUCCACACCCUAUUUCACUGGCCUGGAGCUCCCAGGGGAGCUGAAGCUGGACGCGCCCUACAACUUCAACCACCCUUUCUCCAUCAACAACCUAAUGUCAGAACAGACACCAGCACCUCCCAAACUGGACGUGGGGUUUGGGGGCUACGGGGCUGAAGGUGGGGAGCCUGGAGUCUACUACCAGGGCCUCUAUUCCCGCUCUUUGCUUAAUGCAUCCUAGCAGGGGUUGGGAACAUGGUGGUGGGUAUGGCUGGAGCUCACACCACGAAGCUCUUGGGGCCUGAUCCUUCUGGUGACACUUCACUUGUCCCAUUGGUUAACAUCUGGGUGGGUCUAUUACUUACUGUGAUGACUGCUGUCUCAGUGGGCAUGGUGUUGAUCCACGGGGUACUGUGAUAACCACCAUGGAUACAUUUUGGUGGCCCACUGGGUACUGUGAGGЖCUGCUACAUUGAUGGAUGUUAUUGGCUAAUCCACUGCAUGGUUUGAUGGCCACCAUCUCGGUUGGCCCUUUGGGUGUGAUGGUGAUAGCAUUUCAGUGACAUCUUCUUUGGCCCCCCCCAUUAGGUGCUGUGCCCACUUCUUUUUUGGUGUACUUGGCACAGUAGGUGCCAAGUUGGCCACCAUUCUGUGUAACACCUUUUUUGGCCCAUUGGGUGCUUUGAUGGЖCAUCAUACUGGGUAGGUGACAACGUCAGUGGGCCACCAUGUGCCAUGAUGGCUGCUGCAGCCCCGUGUUGGCCAUGUCGUCACCAUUCUCUCUGGCAUGGGUUGGGUAGGGGAUGGAGGUGAGAAUACUCCUUGGUUUUCUCUGAAGCCCACCCUUUCCCCCAACUCUGGUCCAGGAGAAACCAGAAAAGGCUGGUUAGGGUGUGGGGAAUUUCUACUGAAGUCUGAUUCUUUCCCGGGAAGCGGGGUACUGGCUGUGUUUAAUCAUUAAAGGUACCGUGUCCGCCUCUUA
Sequence (SHORT NAMES ENCODING)	GGGACAGCCGUACCCCGGGCGGUCGGACGGGCGGGCGCCGGUGGGAGCUCGGGCCGUGCCCGCUGAGAGAUCCAGAGCGCUCCGUUCCCCCGGGGCCGGAGCGGGGGCGGGUGGGGGCGUAAGCCCGGGGGAUGCUGGGCUCAGUGAAGAUGGAGGCCCAUGACCUGGCCGAGUGGAGCUACUACCCGGAGGCGGGCGAGGUCUACUCGCCGGUGACCCCAGUGCCCACCAUGGCCCCCCUCAACUCCUACAUGACCCUGAAUCCUCUAAGCUCUCCCUAUCCCCCUGGGGGGCUCCCUGCCUCCCCACUGCCCUCAGGACCCCUGGCACCCCCAGCACCUGCAGCCCCCCUGGGGCCCACUUUCCCAGGCCUGGGUGUCAGCGGUGGCAGCAGCAGCUCCGGGUACGGGGCCCCGGGUCCUGGGCUGGUGCACGGGAAGGAGAUGCCGAAGGGGUAUCGGCGGCCCCUGGCACACGCCAAGCCACCGUAUUCCUAUAUCUCACUCAUCACCAUGGCCAUCCAGCAGGCGCCGGGCAAGAUGCUGACCUUGAGUGAAAUCUACCAGUGGAUCAUGGm6ACCUCUUCCCUUACUACCGGGAGAAUCAGCAGCGCUGGCAGAm6ACUCCAUUCGCCACUCGCUGUCUUUCAACGm6ACUGCUUCGUCAAGGUGGCGCGUUCCCCAGACAAGCCUGGCAAGGGCUCCUACUGGGCCCUACACCCCAGCUCAGGGAACAUGUUUGAGAAUGGCUGCUACCUGCGCCGCCAGAAACGCUUCAAGCUGGAGGAGAAGGUGAAAAAAGGGGGCAGCGGGGCUGCCACCACCACCAGGAACGGGm6ACAGGGUCUGCUGCCUCGACCACCACCCCCGCGGCCACAGUCACCUCCCCGCCCCAGCCCCCGCCUCCAGCCCCUGAGCCUGAGGCCCAGGGCGGGGAAGAUGUGGGGGCUCUGGm6ACUGUGGCUCACCCGCUUCCUCCACACCCUAUUUCACUGGCCUGGAGCUCCCAGGGGAGCUGAAGCUGGACGCGCCCUACAACUUCAACCACCCUUUCUCCAUCAACAACCUAAUGUCAGAACAGACACCAGCACCUCCCAAACUGGACGUGGGGUUUGGGGGCUACGGGGCUGAAGGUGGGGAGCCUGGAGUCUACUACCAGGGCCUCUAUUCCCGCUCUUUGCUUAAUGCAUCCUAGCAGGGGUUGGGAACAUGGUGGUGGGUAUGGCUGGAGCUCACACCACGAAGCUCUUGGGGCCUGAUCCUUCUGGUGACACUUCACUUGUCCCAUUGGUUAACAUCUGGGUGGGUCUAUUACUUACUGUGAUGACUGCUGUCUCAGUGGGCAUGGUGUUGAUCCACGGGGUACUGUGAUAACCACCAUGGAUACAUUUUGGUGGCCCACUGGGUACUGUGAGGm6ACUGCUACAUUGAUGGAUGUUAUUGGCUAAUCCACUGCAUGGUUUGAUGGCCACCAUCUCGGUUGGCCCUUUGGGUGUGAUGGUGAUAGCAUUUCAGUGACAUCUUCUUUGGCCCCCCCCAUUAGGUGCUGUGCCCACUUCUUUUUUGGUGUACUUGGCACAGUAGGUGCCAAGUUGGCCACCAUUCUGUGUAACACCUUUUUUGGCCCAUUGGGUGCUUUGAUGGm6ACAUCAUACUGGGUAGGUGACAACGUCAGUGGGCCACCAUGUGCCAUGAUGGCUGCUGCAGCCCCGUGUUGGCCAUGUCGUCACCAUUCUCUCUGGCAUGGGUUGGGUAGGGGAUGGAGGUGAGAAUACUCCUUGGUUUUCUCUGAAGCCCACCCUUUCCCCCAACUCUGGUCCAGGAGAAACCAGAAAAGGCUGGUUAGGGUGUGGGGAAUUUCUACUGAAGUCUGAUUCUUUCCCGGGAAGCGGGGUACUGGCUGUGUUUAAUCAUUAAAGGUACCGUGUCCGCCUCUUA
Sequence (MODOMICS CODE ENCODING)	GGGACAGCCGUACCCCGGGCGGUCGGACGGGCGGGCGCCGGUGGGAGCUCGGGCCGUGCCCGCUGAGAGAUCCAGAGCGCUCCGUUCCCCCGGGGCCGGAGCGGGGGCGGGUGGGGGCGUAAGCCCGGGGGAUGCUGGGCUCAGUGAAGAUGGAGGCCCAUGACCUGGCCGAGUGGAGCUACUACCCGGAGGCGGGCGAGGUCUACUCGCCGGUGACCCCAGUGCCCACCAUGGCCCCCCUCAACUCCUACAUGACCCUGAAUCCUCUAAGCUCUCCCUAUCCCCCUGGGGGGCUCCCUGCCUCCCCACUGCCCUCAGGACCCCUGGCACCCCCAGCACCUGCAGCCCCCCUGGGGCCCACUUUCCCAGGCCUGGGUGUCAGCGGUGGCAGCAGCAGCUCCGGGUACGGGGCCCCGGGUCCUGGGCUGGUGCACGGGAAGGAGAUGCCGAAGGGGUAUCGGCGGCCCCUGGCACACGCCAAGCCACCGUAUUCCUAUAUCUCACUCAUCACCAUGGCCAUCCAGCAGGCGCCGGGCAAGAUGCUGACCUUGAGUGAAAUCUACCAGUGGAUCAUGG2000000006ACCUCUUCCCUUACUACCGGGAGAAUCAGCAGCGCUGGCAGA2000000006ACUCCAUUCGCCACUCGCUGUCUUUCAACG2000000006ACUGCUUCGUCAAGGUGGCGCGUUCCCCAGACAAGCCUGGCAAGGGCUCCUACUGGGCCCUACACCCCAGCUCAGGGAACAUGUUUGAGAAUGGCUGCUACCUGCGCCGCCAGAAACGCUUCAAGCUGGAGGAGAAGGUGAAAAAAGGGGGCAGCGGGGCUGCCACCACCACCAGGAACGGG2000000006ACAGGGUCUGCUGCCUCGACCACCACCCCCGCGGCCACAGUCACCUCCCCGCCCCAGCCCCCGCCUCCAGCCCCUGAGCCUGAGGCCCAGGGCGGGGAAGAUGUGGGGGCUCUGG2000000006ACUGUGGCUCACCCGCUUCCUCCACACCCUAUUUCACUGGCCUGGAGCUCCCAGGGGAGCUGAAGCUGGACGCGCCCUACAACUUCAACCACCCUUUCUCCAUCAACAACCUAAUGUCAGAACAGACACCAGCACCUCCCAAACUGGACGUGGGGUUUGGGGGCUACGGGGCUGAAGGUGGGGAGCCUGGAGUCUACUACCAGGGCCUCUAUUCCCGCUCUUUGCUUAAUGCAUCCUAGCAGGGGUUGGGAACAUGGUGGUGGGUAUGGCUGGAGCUCACACCACGAAGCUCUUGGGGCCUGAUCCUUCUGGUGACACUUCACUUGUCCCAUUGGUUAACAUCUGGGUGGGUCUAUUACUUACUGUGAUGACUGCUGUCUCAGUGGGCAUGGUGUUGAUCCACGGGGUACUGUGAUAACCACCAUGGAUACAUUUUGGUGGCCCACUGGGUACUGUGAGG2000000006ACUGCUACAUUGAUGGAUGUUAUUGGCUAAUCCACUGCAUGGUUUGAUGGCCACCAUCUCGGUUGGCCCUUUGGGUGUGAUGGUGAUAGCAUUUCAGUGACAUCUUCUUUGGCCCCCCCCAUUAGGUGCUGUGCCCACUUCUUUUUUGGUGUACUUGGCACAGUAGGUGCCAAGUUGGCCACCAUUCUGUGUAACACCUUUUUUGGCCCAUUGGGUGCUUUGAUGG2000000006ACAUCAUACUGGGUAGGUGACAACGUCAGUGGGCCACCAUGUGCCAUGAUGGCUGCUGCAGCCCCGUGUUGGCCAUGUCGUCACCAUUCUCUCUGGCAUGGGUUGGGUAGGGGAUGGAGGUGAGAAUACUCCUUGGUUUUCUCUGAAGCCCACCCUUUCCCCCAACUCUGGUCCAGGAGAAACCAGAAAAGGCUGGUUAGGGUGUGGGGAAUUUCUACUGAAGUCUGAUUCUUUCCCGGGAAGCGGGGUACUGGCUGUGUUUAAUCAUUAAAGGUACCGUGUCCGCCUCUUA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	577	619	649	831	946	1406	1632
Modification Positions	m6A	m6A	m6A	m6A	m6A	m6A	m6A
Genomic Coordinates	19:45872451:+	19:45872493:+	19:45872523:+	19:45872705:+	19:45872820:+	19:45873280:+	19:45873506:+
Level of Experimental Evidence	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	3TeAZFYFxgvp 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn nfCHyrYzE6fB	5Nnepx5V7yHo 6AyXsheySjfx Ap2q43bQLNek gZuvgwMuBfgh Mg9GixDBFQAT msuJfBpJvM5H QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn	6AyXsheySjfx aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh msuJfBpJvM5H nGifePrmgHfe Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn	msuJfBpJvM5H VyCX26p5UBRL	5Nnepx5V7yHo aHkqKEJkRYyb gBgcfFQ5WN9C Mg9GixDBFQAT msuJfBpJvM5H VyCX26p5UBRL	msuJfBpJvM5H VyCX26p5UBRL nfCHyrYzE6fB	msuJfBpJvM5H VyCX26p5UBRL nfCHyrYzE6fB BtsJQJ3DteUq