General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000530811
Gene ID:	ENSG00000110060
Gene Name:	PUS3
Sequence (UNICHARACTER ENCODING)	ACAGGGCAGACCUGUAUGGUUCGUUUAUUCCUGGGGUUGUCAUAUCAUGGCUUAUAAUGACACAGACAGAAACCAGACUGAGAAGCUCCUAAAAAGAGUACGAGAACUGGAGCAAGAGGUGCAAAGACUUAAAAAGGAACAGGCCAAAAAUAAGGAGGACUCAAACAUUAGAGAAAAUUCAGCAGGAGCUGGAAAAACUAAGCGUGCAUUUGAUUUCAGUGCUCAUGGCCGAAGACACGUAGCCCUAAGAAUAGCCUAUAUGGGCUGGGGAUACCAGGGCUUUGCUAGUCAGGAAAACACAAAUAAUACCAUUGAAGAGAAACUGUUUGAAGCUCUAACCAAGACUCGACUAGUAGAAAGCAGACAGACAUCCAACUAUCACCGAUGUGGGAGAACAGAUAAAGGAGUUAGUGCCUUUGGACAGGUGAUCUCACUUGACCUUCGCUCUCAGUUUCCAAGGGGCAGGGAUUCCGAGGЖCUPUAAUGUAAAAGAGGAGGCUAAUGCUGCUGCUGAAGAGAUCCGUUAUACCCACAUUCUCAAUCGGGUACUCCCUCCAGACAUCCGUAUAUUGGCCUGGGCCCCUGUAGAACCAAGCUUCAGUGCUAGGUUCAGCUGCCUUGAGCGGЖCUUACCGCUAUUUUUUCCCUCGUGCUGAUUUAGAUAUUGUAACCAUGGAUUAUGCAGCUCAGAAGUAUGUUGGCACCCAUGAUUUCAGGAЖCUUGUGUAAAAUGGAUGUAGCCAACGGUGUGAUUAAUUUUCAGAGGЖCUAUUCUAUCUGCUCAAGUACAGCUAGUGGGCCAGAGCCCAGGUGAGGGGAGAUGGCAAGAACCUUUCCAGUUAUGUCAGUUUGAAGUGACUGGCCAGGCAUUCCUPUAUCAUCAAGUCCGAUGUAUGAUGGCUAUCCUCUUUCUGAUUGGCCAAGGAAUGGAGAAGCCAGAGAUUAUUGAUGAGCUGCUGAAUAUAGAGAAAAAUCCCCAAAAGCCUCAAUAUAGUAUGGCUGUAGAAUUUCCUCUAGUCUUAUAUGACUGUAAGUUUGAAAAUGUCAAGUGGAUCUAUGACCAGGAGGCUCAGGAGUUCAAUAUUACCCACCUACAACAACUGUGGGCUAAUCAUGCUGUCAAAACUCACAUGUUGUAUAGUAUGCUACAAGGACUGGACACUGUUCCAGUACCCUGUGGAAUAGGЖCCAAAGAUGGAUGGAAUGACAGAAUGGGGAAAUGUUAAGCCCUCUGUCAPAAAGCAGACCAGUGCCUUUGUAGAAGGAGUGAAGAUGCGCACAUAUAAGCCCCUCAUGGЖCCGUCCUAAAUGCCAAGGЖCUGGAAUCCCGGAUCCAGCAUUUUGUACGUAGGGGACGAAUUGAGCACCCACAUUUAUUCCAUGAGGAAGAAACAAAAGCCAAAAGGGЖCUGUAAUGACACACUAGAGGAAGAGAAUACUAAUUUGGAGACACCAACGAAGAGGGUCUGUGUUGACACAGAAAUUAAAAGCAUCAUUUAACCAUAGЖCAAUUUGCCAGGAUCUAGGAЖCCACCUAAUGGUAGGUGGACAGAAAAGGAAAAAAAAAAAAAUUUACUUGCAAGUACUAGGAAUUCAGAUGAUCAGCUCUUAAAAGAAAAAAAAAAGCAAAAAGЖCUAAAGCCCUAUUAAGGAAGUUAUUGCUPUAAUAAGAAAUUUCAAAUAUUCUCUUAUCCCGGUCCAAAAGGAUUAAGCGAUUAAAGAACGUAAAAUGGAGAUGUAUUUACAUACACCUGGAAACCUGUGCCUUGUAUUCAAAUUCAUUAAAGCCUAAUCCUGCAAGUA
Sequence (SHORT NAMES ENCODING)	ACAGGGCAGACCUGUAUGGUUCGUUUAUUCCUGGGGUUGUCAUAUCAUGGCUUAUAAUGACACAGACAGAAACCAGACUGAGAAGCUCCUAAAAAGAGUACGAGAACUGGAGCAAGAGGUGCAAAGACUUAAAAAGGAACAGGCCAAAAAUAAGGAGGACUCAAACAUUAGAGAAAAUUCAGCAGGAGCUGGAAAAACUAAGCGUGCAUUUGAUUUCAGUGCUCAUGGCCGAAGACACGUAGCCCUAAGAAUAGCCUAUAUGGGCUGGGGAUACCAGGGCUUUGCUAGUCAGGAAAACACAAAUAAUACCAUUGAAGAGAAACUGUUUGAAGCUCUAACCAAGACUCGACUAGUAGAAAGCAGACAGACAUCCAACUAUCACCGAUGUGGGAGAACAGAUAAAGGAGUUAGUGCCUUUGGACAGGUGAUCUCACUUGACCUUCGCUCUCAGUUUCCAAGGGGCAGGGAUUCCGAGGm6ACUYUAAUGUAAAAGAGGAGGCUAAUGCUGCUGCUGAAGAGAUCCGUUAUACCCACAUUCUCAAUCGGGUACUCCCUCCAGACAUCCGUAUAUUGGCCUGGGCCCCUGUAGAACCAAGCUUCAGUGCUAGGUUCAGCUGCCUUGAGCGGm6ACUUACCGCUAUUUUUUCCCUCGUGCUGAUUUAGAUAUUGUAACCAUGGAUUAUGCAGCUCAGAAGUAUGUUGGCACCCAUGAUUUCAGGAm6ACUUGUGUAAAAUGGAUGUAGCCAACGGUGUGAUUAAUUUUCAGAGGm6ACUAUUCUAUCUGCUCAAGUACAGCUAGUGGGCCAGAGCCCAGGUGAGGGGAGAUGGCAAGAACCUUUCCAGUUAUGUCAGUUUGAAGUGACUGGCCAGGCAUUCCUYUAUCAUCAAGUCCGAUGUAUGAUGGCUAUCCUCUUUCUGAUUGGCCAAGGAAUGGAGAAGCCAGAGAUUAUUGAUGAGCUGCUGAAUAUAGAGAAAAAUCCCCAAAAGCCUCAAUAUAGUAUGGCUGUAGAAUUUCCUCUAGUCUUAUAUGACUGUAAGUUUGAAAAUGUCAAGUGGAUCUAUGACCAGGAGGCUCAGGAGUUCAAUAUUACCCACCUACAACAACUGUGGGCUAAUCAUGCUGUCAAAACUCACAUGUUGUAUAGUAUGCUACAAGGACUGGACACUGUUCCAGUACCCUGUGGAAUAGGm6ACCAAAGAUGGAUGGAAUGACAGAAUGGGGAAAUGUUAAGCCCUCUGUCAYAAAGCAGACCAGUGCCUUUGUAGAAGGAGUGAAGAUGCGCACAUAUAAGCCCCUCAUGGm6ACCGUCCUAAAUGCCAAGGm6ACUGGAAUCCCGGAUCCAGCAUUUUGUACGUAGGGGACGAAUUGAGCACCCACAUUUAUUCCAUGAGGAAGAAACAAAAGCCAAAAGGGm6ACUGUAAUGACACACUAGAGGAAGAGAAUACUAAUUUGGAGACACCAACGAAGAGGGUCUGUGUUGACACAGAAAUUAAAAGCAUCAUUUAACCAUAGm6ACAAUUUGCCAGGAUCUAGGAm6ACCACCUAAUGGUAGGUGGACAGAAAAGGAAAAAAAAAAAAAUUUACUUGCAAGUACUAGGAAUUCAGAUGAUCAGCUCUUAAAAGAAAAAAAAAAGCAAAAAGm6ACUAAAGCCCUAUUAAGGAAGUUAUUGCUYUAAUAAGAAAUUUCAAAUAUUCUCUUAUCCCGGUCCAAAAGGAUUAAGCGAUUAAAGAACGUAAAAUGGAGAUGUAUUUACAUACACCUGGAAACCUGUGCCUUGUAUUCAAAUUCAUUAAAGCCUAAUCCUGCAAGUA
Sequence (MODOMICS CODE ENCODING)	ACAGGGCAGACCUGUAUGGUUCGUUUAUUCCUGGGGUUGUCAUAUCAUGGCUUAUAAUGACACAGACAGAAACCAGACUGAGAAGCUCCUAAAAAGAGUACGAGAACUGGAGCAAGAGGUGCAAAGACUUAAAAAGGAACAGGCCAAAAAUAAGGAGGACUCAAACAUUAGAGAAAAUUCAGCAGGAGCUGGAAAAACUAAGCGUGCAUUUGAUUUCAGUGCUCAUGGCCGAAGACACGUAGCCCUAAGAAUAGCCUAUAUGGGCUGGGGAUACCAGGGCUUUGCUAGUCAGGAAAACACAAAUAAUACCAUUGAAGAGAAACUGUUUGAAGCUCUAACCAAGACUCGACUAGUAGAAAGCAGACAGACAUCCAACUAUCACCGAUGUGGGAGAACAGAUAAAGGAGUUAGUGCCUUUGGACAGGUGAUCUCACUUGACCUUCGCUCUCAGUUUCCAAGGGGCAGGGAUUCCGAGG2000000006ACU2000000009UUAAUGUAAAAGAGGAGGCUAAUGCUGCUGCUGAAGAGAUCCGUUAUACCCACAUUCUCAAUCGGGUACUCCCUCCAGACAUCCGUAUAUUGGCCUGGGCCCCUGUAGAACCAAGCUUCAGUGCUAGGUUCAGCUGCCUUGAGCGG2000000006ACUUACCGCUAUUUUUUCCCUCGUGCUGAUUUAGAUAUUGUAACCAUGGAUUAUGCAGCUCAGAAGUAUGUUGGCACCCAUGAUUUCAGGA2000000006ACUUGUGUAAAAUGGAUGUAGCCAACGGUGUGAUUAAUUUUCAGAGG2000000006ACUAUUCUAUCUGCUCAAGUACAGCUAGUGGGCCAGAGCCCAGGUGAGGGGAGAUGGCAAGAACCUUUCCAGUUAUGUCAGUUUGAAGUGACUGGCCAGGCAUUCCU2000000009UUAUCAUCAAGUCCGAUGUAUGAUGGCUAUCCUCUUUCUGAUUGGCCAAGGAAUGGAGAAGCCAGAGAUUAUUGAUGAGCUGCUGAAUAUAGAGAAAAAUCCCCAAAAGCCUCAAUAUAGUAUGGCUGUAGAAUUUCCUCUAGUCUUAUAUGACUGUAAGUUUGAAAAUGUCAAGUGGAUCUAUGACCAGGAGGCUCAGGAGUUCAAUAUUACCCACCUACAACAACUGUGGGCUAAUCAUGCUGUCAAAACUCACAUGUUGUAUAGUAUGCUACAAGGACUGGACACUGUUCCAGUACCCUGUGGAAUAGG2000000006ACCAAAGAUGGAUGGAAUGACAGAAUGGGGAAAUGUUAAGCCCUCUGUCA2000000009UAAAGCAGACCAGUGCCUUUGUAGAAGGAGUGAAGAUGCGCACAUAUAAGCCCCUCAUGG2000000006ACCGUCCUAAAUGCCAAGG2000000006ACUGGAAUCCCGGAUCCAGCAUUUUGUACGUAGGGGACGAAUUGAGCACCCACAUUUAUUCCAUGAGGAAGAAACAAAAGCCAAAAGGG2000000006ACUGUAAUGACACACUAGAGGAAGAGAAUACUAAUUUGGAGACACCAACGAAGAGGGUCUGUGUUGACACAGAAAUUAAAAGCAUCAUUUAACCAUAG2000000006ACAAUUUGCCAGGAUCUAGGA2000000006ACCACCUAAUGGUAGGUGGACAGAAAAGGAAAAAAAAAAAAAUUUACUUGCAAGUACUAGGAAUUCAGAUGAUCAGCUCUUAAAAGAAAAAAAAAAGCAAAAAG2000000006ACUAAAGCCCUAUUAAGGAAGUUAUUGCU2000000009UUAAUAAGAAAUUUCAAAUAUUCUCUUAUCCCGGUCCAAAAGGAUUAAGCGAUUAAAGAACGUAAAAUGGAGAUGUAUUUACAUACACCUGGAAACCUGUGCCUUGUAUUCAAAUUCAUUAAAGCCUAAUCCUGCAAGUA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	477	480	626	717	764	871	1183	1233	1293	1312	1401	1499	1520	1624	1653
Modification Positions	m6A	Y	m6A	m6A	m6A	Y	m6A	Y	m6A	m6A	m6A	m6A	m6A	m6A	Y
Genomic Coordinates	11:125895737:-	11:125895734:-	11:125895588:-	11:125895497:-	11:125895450:-	11:125895343:-	11:125894094:-	11:125894044:-	11:125893984:-	11:125893965:-	11:125893876:-	11:125893778:-	11:125893757:-	11:125893653:-	11:125893624:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	6UuHp6YApVKv aivdrAsbdKEU msuJfBpJvM5H NjZ8bGGJsNSR VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 LZJKems7W2wi BtsJQJ3DteUq Yfn77uLS5tv8	jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BsCW7emuRX7M Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq Yfn77uLS5tv8	3TeAZFYFxgvp msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BsCW7emuRX7M Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq S9vNeQQYrhac Yfn77uLS5tv8	3TeAZFYFxgvp msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 BtsJQJ3DteUq dknfVe6BK8aP S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP S9vNeQQYrhac Yfn77uLS5tv8	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U 93arJtwJmuS9 Lny8GcCeVGc9 BtsJQJ3DteUq dknfVe6BK8aP S9vNeQQYrhac Yfn77uLS5tv8	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 BtsJQJ3DteUq dknfVe6BK8aP S9vNeQQYrhac Yfn77uLS5tv8	aJksAshEgQ8U D6ncpa2PPWj3 BtsJQJ3DteUq dknfVe6BK8aP S9vNeQQYrhac Yfn77uLS5tv8	aHkqKEJkRYyb msuJfBpJvM5H VyCX26p5UBRL BkoLW2CBToyL nfCHyrYzE6fB Lny8GcCeVGc9 BtsJQJ3DteUq dknfVe6BK8aP iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8