General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000254436
Gene ID:	ENSG00000132109
Gene Name:	TRIM21
Sequence (UNICHARACTER ENCODING)	AGACUUGCUUCUGAGCGGAAACUGAAAGUGAAAUAGGGAGCUGGCUACCAGCGUUGAGUCCCCUGUAAAGCCAAACCCCCUAAAGGUCUCCACACUGCUGUUUAACGGCACACUUGACAAUGGCUUCAGCAGCACGCUUGACAAUGAUGUGGGAGGAGGUCACAUGCCCUAUCUGCCUGGACCCCUUCGUGGAGCCUGUGAGCAUCGAGUGUGGCCACAGCUUCUGCCAGGAAUGCAUCUCUCAGGUUGGGAAAGGUGGGGGCAGCGUCUGUCCUGUGUGCCGGCAGCGCUUUCUGCUCAAGAAUCUCCGGCCCAAUCGACAGCUAGCCAACAUGGUGAACAACCUUAAAGAAAUCAGCCAGGAGGCCAGAGAGGGCACACAGGGGGAACGGUGUGCAGUGCAUGGAGAGAGACUUCACCUGUUCUGUGAGAAAGAUGGGAAGGCCCUUUGCUGGGUAUGUGCCCAGUCUCGGAAACACCGUGACCACGCCAUGGUCCCUCUUGAGGAGGCUGCACAGGAGUACCAGGAGAAGCUCCAGGUGGCAUUAGGGGAACUGAGAAGAAAGCAGGAGUUGGCUGAGAAGUUGGAAGUGGAAAUUGCAAUAAAGAGAGCAGACUGGAAGAAAACAGUGGAAACACAGAAAUCUAGGAUUCACGCAGAGUUUGUGCAGCAAAAAAACUUCCUGGUUGAAGAAGAACAGAGGCAGCUGCAGGAGCUGGAGAAGGAUGAGAGGGAGCAGCUGAGAAUCCUGGGGGAGAAAGAGGCCAAGCUGGCCCAGCAGAGCCAGGCCCUACAGGAGCUCAUCUCAGAGCUAGAUCGAAGGUGCCACAGCUCAGCACUGGAACUGCUGCAGGAGGUGAUAAUUGUCCUGGAAAGGAGUGAGUCCUGGAACCUGAAGGACCUGGAUAUUACCUCUCCAGAACUCAGGAGUGUGUGCCAUGUGCCAGGGCUGAAGAAGAUGCUGAGGACAUGUGCAGUCCACAUCACUCUGGAUCCAGACACAGCCAAUCCGUGGCUGAUACUUUCAGAAGAUCGGAGACAAGUGAGGCUUGGAGACACCCAGCAGAGCAUACCUGGAAAUGAAGAGAGAUUUGAUAGUUAUCCUAUGGUCCUGGGUGCCCAGCACUUUCACUCUGGAAAACAUUACUGGGAGGUAGAUGUGACAGGAAAGGAGGCCUGGGACCUGGGUGUCUGCAGAGЖCUCUGUGCGCAGGAAGGGGCACUUUUUGCUUAGUUCCAAGAGUGGCUUCUGGЖCAAUUUGGUUGUGGAACAAACAAAAAUAUGAGGCUGGCACCUACCCCCAGACUCCCCUCCACCUUCAGGUGCCUCCAUGCCAAGUUGGGAUUUUCCUGGЖCUAUGAGGCUGGCAUGGUCUCCUUCUACAACAUCACUGACCAUGGCUCCCUCAUCUACUCCUUCUCUGAAUGUGCCUUUACAGGACCUCUGCGGCCCUUCUUCAGUCCUGGUUUCAAUGAUGGAGGAAAAAACACAGCCCCUCUAACCCUCUGUCCACUGAAUAUUGGAUCACAAGGAUCCACUGЖCUAUUGAUGGCUUUCUCUGGЖCACUGCCACUCUCCCCAUUGGCACCGCUUCUCAGCCACAAACCCUGCCUCUUUUCCCCAUGAЖCUCUGAACCACCUUUGUCUCUGCAGAGGCAUCCGGAUCCCAGCAAGCGAGCUUUAGCAGGGAAGUCACUUCACCAUCAACAUUCCUGCCCCAGAUGGCUUUGUGAUUCCCUCCAGUGAAGCAGCCUCCUUAUAUUUGGCCCAAACUCAUCUUGAUCAACCAAAAACAUGUUUCUGCCUUCUUUAUGGGЖCUUAAGUUUUUUUUUUCUCCUCUCCAUCUCUAGGAUGUCGUCUUUGGUGAGAUCUCUAUUAUAUCUUGUAUGGUUUGCAAAAGGGCUUCCUAAAAAUAAAAAAUAAAAUUUAAAAAACUGUG
Sequence (SHORT NAMES ENCODING)	AGACUUGCUUCUGAGCGGAAACUGAAAGUGAAAUAGGGAGCUGGCUACCAGCGUUGAGUCCCCUGUAAAGCCAAACCCCCUAAAGGUCUCCACACUGCUGUUUAACGGCACACUUGACAAUGGCUUCAGCAGCACGCUUGACAAUGAUGUGGGAGGAGGUCACAUGCCCUAUCUGCCUGGACCCCUUCGUGGAGCCUGUGAGCAUCGAGUGUGGCCACAGCUUCUGCCAGGAAUGCAUCUCUCAGGUUGGGAAAGGUGGGGGCAGCGUCUGUCCUGUGUGCCGGCAGCGCUUUCUGCUCAAGAAUCUCCGGCCCAAUCGACAGCUAGCCAACAUGGUGAACAACCUUAAAGAAAUCAGCCAGGAGGCCAGAGAGGGCACACAGGGGGAACGGUGUGCAGUGCAUGGAGAGAGACUUCACCUGUUCUGUGAGAAAGAUGGGAAGGCCCUUUGCUGGGUAUGUGCCCAGUCUCGGAAACACCGUGACCACGCCAUGGUCCCUCUUGAGGAGGCUGCACAGGAGUACCAGGAGAAGCUCCAGGUGGCAUUAGGGGAACUGAGAAGAAAGCAGGAGUUGGCUGAGAAGUUGGAAGUGGAAAUUGCAAUAAAGAGAGCAGACUGGAAGAAAACAGUGGAAACACAGAAAUCUAGGAUUCACGCAGAGUUUGUGCAGCAAAAAAACUUCCUGGUUGAAGAAGAACAGAGGCAGCUGCAGGAGCUGGAGAAGGAUGAGAGGGAGCAGCUGAGAAUCCUGGGGGAGAAAGAGGCCAAGCUGGCCCAGCAGAGCCAGGCCCUACAGGAGCUCAUCUCAGAGCUAGAUCGAAGGUGCCACAGCUCAGCACUGGAACUGCUGCAGGAGGUGAUAAUUGUCCUGGAAAGGAGUGAGUCCUGGAACCUGAAGGACCUGGAUAUUACCUCUCCAGAACUCAGGAGUGUGUGCCAUGUGCCAGGGCUGAAGAAGAUGCUGAGGACAUGUGCAGUCCACAUCACUCUGGAUCCAGACACAGCCAAUCCGUGGCUGAUACUUUCAGAAGAUCGGAGACAAGUGAGGCUUGGAGACACCCAGCAGAGCAUACCUGGAAAUGAAGAGAGAUUUGAUAGUUAUCCUAUGGUCCUGGGUGCCCAGCACUUUCACUCUGGAAAACAUUACUGGGAGGUAGAUGUGACAGGAAAGGAGGCCUGGGACCUGGGUGUCUGCAGAGm6ACUCUGUGCGCAGGAAGGGGCACUUUUUGCUUAGUUCCAAGAGUGGCUUCUGGm6ACAAUUUGGUUGUGGAACAAACAAAAAUAUGAGGCUGGCACCUACCCCCAGACUCCCCUCCACCUUCAGGUGCCUCCAUGCCAAGUUGGGAUUUUCCUGGm6ACUAUGAGGCUGGCAUGGUCUCCUUCUACAACAUCACUGACCAUGGCUCCCUCAUCUACUCCUUCUCUGAAUGUGCCUUUACAGGACCUCUGCGGCCCUUCUUCAGUCCUGGUUUCAAUGAUGGAGGAAAAAACACAGCCCCUCUAACCCUCUGUCCACUGAAUAUUGGAUCACAAGGAUCCACUGm6ACUAUUGAUGGCUUUCUCUGGm6ACACUGCCACUCUCCCCAUUGGCACCGCUUCUCAGCCACAAACCCUGCCUCUUUUCCCCAUGAm6ACUCUGAACCACCUUUGUCUCUGCAGAGGCAUCCGGAUCCCAGCAAGCGAGCUUUAGCAGGGAAGUCACUUCACCAUCAACAUUCCUGCCCCAGAUGGCUUUGUGAUUCCCUCCAGUGAAGCAGCCUCCUUAUAUUUGGCCCAAACUCAUCUUGAUCAACCAAAAACAUGUUUCUGCCUUCUUUAUGGGm6ACUUAAGUUUUUUUUUUCUCCUCUCCAUCUCUAGGAUGUCGUCUUUGGUGAGAUCUCUAUUAUAUCUUGUAUGGUUUGCAAAAGGGCUUCCUAAAAAUAAAAAAUAAAAUUUAAAAAACUGUG
Sequence (MODOMICS CODE ENCODING)	AGACUUGCUUCUGAGCGGAAACUGAAAGUGAAAUAGGGAGCUGGCUACCAGCGUUGAGUCCCCUGUAAAGCCAAACCCCCUAAAGGUCUCCACACUGCUGUUUAACGGCACACUUGACAAUGGCUUCAGCAGCACGCUUGACAAUGAUGUGGGAGGAGGUCACAUGCCCUAUCUGCCUGGACCCCUUCGUGGAGCCUGUGAGCAUCGAGUGUGGCCACAGCUUCUGCCAGGAAUGCAUCUCUCAGGUUGGGAAAGGUGGGGGCAGCGUCUGUCCUGUGUGCCGGCAGCGCUUUCUGCUCAAGAAUCUCCGGCCCAAUCGACAGCUAGCCAACAUGGUGAACAACCUUAAAGAAAUCAGCCAGGAGGCCAGAGAGGGCACACAGGGGGAACGGUGUGCAGUGCAUGGAGAGAGACUUCACCUGUUCUGUGAGAAAGAUGGGAAGGCCCUUUGCUGGGUAUGUGCCCAGUCUCGGAAACACCGUGACCACGCCAUGGUCCCUCUUGAGGAGGCUGCACAGGAGUACCAGGAGAAGCUCCAGGUGGCAUUAGGGGAACUGAGAAGAAAGCAGGAGUUGGCUGAGAAGUUGGAAGUGGAAAUUGCAAUAAAGAGAGCAGACUGGAAGAAAACAGUGGAAACACAGAAAUCUAGGAUUCACGCAGAGUUUGUGCAGCAAAAAAACUUCCUGGUUGAAGAAGAACAGAGGCAGCUGCAGGAGCUGGAGAAGGAUGAGAGGGAGCAGCUGAGAAUCCUGGGGGAGAAAGAGGCCAAGCUGGCCCAGCAGAGCCAGGCCCUACAGGAGCUCAUCUCAGAGCUAGAUCGAAGGUGCCACAGCUCAGCACUGGAACUGCUGCAGGAGGUGAUAAUUGUCCUGGAAAGGAGUGAGUCCUGGAACCUGAAGGACCUGGAUAUUACCUCUCCAGAACUCAGGAGUGUGUGCCAUGUGCCAGGGCUGAAGAAGAUGCUGAGGACAUGUGCAGUCCACAUCACUCUGGAUCCAGACACAGCCAAUCCGUGGCUGAUACUUUCAGAAGAUCGGAGACAAGUGAGGCUUGGAGACACCCAGCAGAGCAUACCUGGAAAUGAAGAGAGAUUUGAUAGUUAUCCUAUGGUCCUGGGUGCCCAGCACUUUCACUCUGGAAAACAUUACUGGGAGGUAGAUGUGACAGGAAAGGAGGCCUGGGACCUGGGUGUCUGCAGAG2000000006ACUCUGUGCGCAGGAAGGGGCACUUUUUGCUUAGUUCCAAGAGUGGCUUCUGG2000000006ACAAUUUGGUUGUGGAACAAACAAAAAUAUGAGGCUGGCACCUACCCCCAGACUCCCCUCCACCUUCAGGUGCCUCCAUGCCAAGUUGGGAUUUUCCUGG2000000006ACUAUGAGGCUGGCAUGGUCUCCUUCUACAACAUCACUGACCAUGGCUCCCUCAUCUACUCCUUCUCUGAAUGUGCCUUUACAGGACCUCUGCGGCCCUUCUUCAGUCCUGGUUUCAAUGAUGGAGGAAAAAACACAGCCCCUCUAACCCUCUGUCCACUGAAUAUUGGAUCACAAGGAUCCACUG2000000006ACUAUUGAUGGCUUUCUCUGG2000000006ACACUGCCACUCUCCCCAUUGGCACCGCUUCUCAGCCACAAACCCUGCCUCUUUUCCCCAUGA2000000006ACUCUGAACCACCUUUGUCUCUGCAGAGGCAUCCGGAUCCCAGCAAGCGAGCUUUAGCAGGGAAGUCACUUCACCAUCAACAUUCCUGCCCCAGAUGGCUUUGUGAUUCCCUCCAGUGAAGCAGCCUCCUUAUAUUUGGCCCAAACUCAUCUUGAUCAACCAAAAACAUGUUUCUGCCUUCUUUAUGGG2000000006ACUUAAGUUUUUUUUUUCUCCUCUCCAUCUCUAGGAUGUCGUCUUUGGUGAGAUCUCUAUUAUAUCUUGUAUGGUUUGCAAAAGGGCUUCCUAAAAAUAAAAAAUAAAAUUUAAAAAACUGUG

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	1201	1254	1354	1540	1561	1624	1813
Modification Positions	m6A	m6A	m6A	m6A	m6A	m6A	m6A
Genomic Coordinates	11:4385631:-	11:4385578:-	11:4385478:-	11:4385292:-	11:4385271:-	11:4385208:-	11:4385019:-
Level of Experimental Evidence	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 Yfn77uLS5tv8	6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR QmcpiJ88DBDn QpiKdbVikVz2 V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 Yfn77uLS5tv8	3TeAZFYFxgvp 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 8cMbzB4aD5Se KTLz8piFYdwC WiQcrNTGZHPT BsCW7emuRX7M Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G XUkp6ghERQML Yfn77uLS5tv8	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 UKen6WEino9G Yfn77uLS5tv8	3TeAZFYFxgvp 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 UKen6WEino9G Yfn77uLS5tv8	3TeAZFYFxgvp 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 Yfn77uLS5tv8	jNkxUQNx8GRd 8cMbzB4aD5Se ArijeGVTwYBw KTLz8piFYdwC WiQcrNTGZHPT Lny8GcCeVGc9 UKen6WEino9G Yfn77uLS5tv8