Modomics - A Database of RNA Modifications

General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000257261
Gene ID:	ENSG00000134824
Gene Name:	FADS2
Sequence (UNICHARACTER ENCODING)	AGAGACCUGAGGCUCGGGGCUGCAGAUGGAAUGCACGGCAGGGAGGCGGGACCCUUUGUUUGUGUGUGCGUGUUGUUGGCCUCCAUCCCCACUCCCCAGACUCCACUUCUCCAGGCCUCUCUCCCGCCUUUUCAUCCCGCAUCCGCAGGACACCCAAUCACCGGGCAACAGGAUGCCUUCCGCGCCUUCCACCCUGACCUGGAAUUCGUGGGCAAGUUCUUGAAACCCCUGCUGAUUGGUGAACUGGCCCCGGAGGAGCCCAGCCAGGACCACGGCAAGAACUCAAAGAUCACUGAGGACUUCCGGGCCCUGAGGAAGACGGCUGAGGACAUGAACCUGUUCAAGACCAACCACGUGUUCUUCCUCCUCCUCCUGGCCCACAUCAUCGCCCUGGAGAGCAUUGCAUGGUUCACUGUCUUUUACUUUGGCAAUGGCUGGAUUCCUACCCUCAUCACGGCCUUUGUCCUUGCUACCUCUCAGGCCCAAGCUGGAUGGCUGCAACAUGAUUAUGGCCACCUGUCUGUCUACЖGAAAACCCAAGUGGAЖCCACCUUGUCCACAAAUUCGUCAUUGGCCACUUAAAGGGUGCCUCUGCCAACUGGUGGAAUCAUCGCCACUUCCAGCACCACGCCAAGCCUAЖCAUCUUCCACAAGGAUCCCGAUGUGAACAUGCUGCACGUGUUUGUUCUGGGCGAAUGGCAGCCCAUCGAGUACGGCAAGAAGAAGCUGAAAUACCUGCCCUACЖAUCACCAGCACGAAUACUUCUUCCUGAUUGGGCCGCCGCUGCUCAUCCCCAUGUAUUUCCAGUACCAGAUCAUCAUGACCAUGAUCGUCCAPAAGAACUGGGUGGACCUGGCCUGGGCCGUCAGCUACUACAUCCGGUUCUUCAUCACCUACЖ PCCCUUUCUACGGCAPCCUGGGAGCCCUCCUUUUCCUCAACUUCAUCAGGUUCCUGGAGAGCCACUGGUUUGUGUGGGUCACACAGAUGAAUCACAUCGUCAUGGAGAUUGACCAGGAGGCCUACCGUGACUGGUUCAGUAGCCAGCUGACAGCCACCUGCAACGUGGAGCAGUCCUUCUUCAACGACUGGUUCAGUGGACACCUUAЖCUUCCAGAUUGAGCACCACCUCUUCCCCACCAUGCCCCGGCACAACUUACЖCAAGAUCGCCCCGCUGGUGAAGUCUCUAUGUGCCAAGCAUGGCAUUGAAUACCAGGAGAAGCCGCUACUGAGGGCCCUGCUGGACAUCAUCAGGUCCCUGAAGAAGUCUGGGAAGCUGUGGCUGGACGCCUACCUUCACAAAUGAAGCCACAGCCCCCGGGACACCGUGGGGAAGGGGUGCAGGUGGGGUGAUGGCCAGAGGAAUGAUGGGCUUUUGUUCUGAGGGGUGUCCGAGAGGCUGGUGUAUGCACUGCUCACGGACCCCAUGUUGGAUCUUUCUCCCUUUCUCCUCUCCUUUUUCUCUUCACAUCUCCCCCAUAGCACCCUGCCCUCAUGGGACCUGCCCUCCCUCAGCCGUCAGCCAUCAGCCAUGGCCCUCCCAGUGCCUCCUAGCCCCUUCUUCCAAGGAGCAGAGAGGUGGCCACCGGGGGUGGCUCUGUCCUACCUCCACUCUCUGCCCCUAAAGAUGGGAGGAGACCAGCGGUCCAUGGGUCUGGCCUGUGAGUCUCCCCUUGCAGCCUGGUCACUAGGCAUCACCCCCGCUUUGGUUCUUCAGAUGCUCUUGGGGUUCAUAGGGGCAGGUCCUAGUCGGGCAGGGCCCCUGACCCUCCCGGCCUGGCUUCACUCUCCCUGACGGCUGCCAUUGGUCCACCCUUUCAUAGAGAGGCCUGCUUUGUUACAAAGCUCGGGUCUCCCPCCUGCAGCUCGGUUAAGUACCCGAGGCCUCUCUUAAGAUGUCCAGGGCCCCAGGCCCGCGGGCACAGCCAGCCCAAACCUUGGGCCCUGGAAGAGUCCUCCACCCCAUCACUAGAGUGCUCUGACCCUGGGCUUUCACGGGCCCCAUUCCACCGCCUCCCCAACUUGAGCCUGUGACCUUGGGACCAAAGGGGGAGUCCCUCGUCUCUUGUGACUCAGCAGAGGCAGUGGCCACGUUCAGGGAGGGGCCGGCUGGCCUGGAGGCUCAGCCCACCCPCCAGCUUUUCCUCAGGGUGUCCUGAGGUCCAAGAUUCUGGAGCAAUCUGACCCUUCUCCAAAGGCUCUGUUAUCAGCUGGGCAGUGCCAGCCAAUCCCUGGCCAUPUGGCCCCAGGGGACGUGGGCCCUGCAGGCUGCAGGAGGGCACUGGAGCUGGGAGGUCUCGUCCCAGCCCUCCCCAUCUCGGGGCUGCUGUGUGGACGGCGCUGCCUCAGGCACUCUCCUGUCUGAACCUGCCCUUACUGUGUUUAACCUGUUGCUCCAGGAUGCAUUCUGAUAGGAGGGGGCGGCAGGGCUGGGCCUUGUGACAAUCUGCCUUUCACCACAUGGCCUUGCCUCGGUGGCCCUGACUGUCAGGGAGGGCCAGGGAGGCAGAGCGGGAGGGAGUCUCAGGAGGAGGCUGCCCUGAGGGGCUGGGGAGGGGGUACCUCAUGAGGACCAGGGUGGAGCUGAGAAGAGGAGGAGGUGGGGGCUGGAGGUGCUGGUAGCUGAGGGGACGGGCAAGUGAGAGGGGAGGGAGGGAAGUCCUGGGAGGAUCCUGAGCUGCUGUUGCAGUCUAACCCACUAAUCAGUUCUUAGAUUCAGGGGAAGGGCAGGCACCAACAACUCAGAAUGGGGGCUUUCGGGGAGGGCGCCUAGUCCCCCCAGCUCUAAGCAGCCAGGAGGGACCUGCAUCUAAGCAUCUGGGUUGCCAUGGCAAUGGCAUGCCCCCCAGCUACUGUAUGCCCCCGACCCCCGCAGAGGCAGAAUGAACCCAUAGGGAGCUGAUCGUAAUGUUUAUCAUGUUACUUCCCCACCCCUACAUUUUUUGAAAUAAAAUAAGGAAUUUUAUUCUCA
Sequence (SHORT NAMES ENCODING)	AGAGACCUGAGGCUCGGGGCUGCAGAUGGAAUGCACGGCAGGGAGGCGGGACCCUUUGUUUGUGUGUGCGUGUUGUUGGCCUCCAUCCCCACUCCCCAGACUCCACUUCUCCAGGCCUCUCUCCCGCCUUUUCAUCCCGCAUCCGCAGGACACCCAAUCACCGGGCAACAGGAUGCCUUCCGCGCCUUCCACCCUGACCUGGAAUUCGUGGGCAAGUUCUUGAAACCCCUGCUGAUUGGUGAACUGGCCCCGGAGGAGCCCAGCCAGGACCACGGCAAGAACUCAAAGAUCACUGAGGACUUCCGGGCCCUGAGGAAGACGGCUGAGGACAUGAACCUGUUCAAGACCAACCACGUGUUCUUCCUCCUCCUCCUGGCCCACAUCAUCGCCCUGGAGAGCAUUGCAUGGUUCACUGUCUUUUACUUUGGCAAUGGCUGGAUUCCUACCCUCAUCACGGCCUUUGUCCUUGCUACCUCUCAGGCCCAAGCUGGAUGGCUGCAACAUGAUUAUGGCCACCUGUCUGUCUACm6AGAAAACCCAAGUGGAm6ACCACCUUGUCCACAAAUUCGUCAUUGGCCACUUAAAGGGUGCCUCUGCCAACUGGUGGAAUCAUCGCCACUUCCAGCACCACGCCAAGCCUAm6ACAUCUUCCACAAGGAUCCCGAUGUGAACAUGCUGCACGUGUUUGUUCUGGGCGAAUGGCAGCCCAUCGAGUACGGCAAGAAGAAGCUGAAAUACCUGCCCUACm6AAUCACCAGCACGAAUACUUCUUCCUGAUUGGGCCGCCGCUGCUCAUCCCCAUGUAUUUCCAGUACCAGAUCAUCAUGACCAUGAUCGUCCAYAAGAACUGGGUGGACCUGGCCUGGGCCGUCAGCUACUACAUCCGGUUCUUCAUCACCUACm6A YCCCUUUCUACGGCAYCCUGGGAGCCCUCCUUUUCCUCAACUUCAUCAGGUUCCUGGAGAGCCACUGGUUUGUGUGGGUCACACAGAUGAAUCACAUCGUCAUGGAGAUUGACCAGGAGGCCUACCGUGACUGGUUCAGUAGCCAGCUGACAGCCACCUGCAACGUGGAGCAGUCCUUCUUCAACGACUGGUUCAGUGGACACCUUAm6ACUUCCAGAUUGAGCACCACCUCUUCCCCACCAUGCCCCGGCACAACUUACm6ACAAGAUCGCCCCGCUGGUGAAGUCUCUAUGUGCCAAGCAUGGCAUUGAAUACCAGGAGAAGCCGCUACUGAGGGCCCUGCUGGACAUCAUCAGGUCCCUGAAGAAGUCUGGGAAGCUGUGGCUGGACGCCUACCUUCACAAAUGAAGCCACAGCCCCCGGGACACCGUGGGGAAGGGGUGCAGGUGGGGUGAUGGCCAGAGGAAUGAUGGGCUUUUGUUCUGAGGGGUGUCCGAGAGGCUGGUGUAUGCACUGCUCACGGACCCCAUGUUGGAUCUUUCUCCCUUUCUCCUCUCCUUUUUCUCUUCACAUCUCCCCCAUAGCACCCUGCCCUCAUGGGACCUGCCCUCCCUCAGCCGUCAGCCAUCAGCCAUGGCCCUCCCAGUGCCUCCUAGCCCCUUCUUCCAAGGAGCAGAGAGGUGGCCACCGGGGGUGGCUCUGUCCUACCUCCACUCUCUGCCCCUAAAGAUGGGAGGAGACCAGCGGUCCAUGGGUCUGGCCUGUGAGUCUCCCCUUGCAGCCUGGUCACUAGGCAUCACCCCCGCUUUGGUUCUUCAGAUGCUCUUGGGGUUCAUAGGGGCAGGUCCUAGUCGGGCAGGGCCCCUGACCCUCCCGGCCUGGCUUCACUCUCCCUGACGGCUGCCAUUGGUCCACCCUUUCAUAGAGAGGCCUGCUUUGUUACAAAGCUCGGGUCUCCCYCCUGCAGCUCGGUUAAGUACCCGAGGCCUCUCUUAAGAUGUCCAGGGCCCCAGGCCCGCGGGCACAGCCAGCCCAAACCUUGGGCCCUGGAAGAGUCCUCCACCCCAUCACUAGAGUGCUCUGACCCUGGGCUUUCACGGGCCCCAUUCCACCGCCUCCCCAACUUGAGCCUGUGACCUUGGGACCAAAGGGGGAGUCCCUCGUCUCUUGUGACUCAGCAGAGGCAGUGGCCACGUUCAGGGAGGGGCCGGCUGGCCUGGAGGCUCAGCCCACCCYCCAGCUUUUCCUCAGGGUGUCCUGAGGUCCAAGAUUCUGGAGCAAUCUGACCCUUCUCCAAAGGCUCUGUUAUCAGCUGGGCAGUGCCAGCCAAUCCCUGGCCAUYUGGCCCCAGGGGACGUGGGCCCUGCAGGCUGCAGGAGGGCACUGGAGCUGGGAGGUCUCGUCCCAGCCCUCCCCAUCUCGGGGCUGCUGUGUGGACGGCGCUGCCUCAGGCACUCUCCUGUCUGAACCUGCCCUUACUGUGUUUAACCUGUUGCUCCAGGAUGCAUUCUGAUAGGAGGGGGCGGCAGGGCUGGGCCUUGUGACAAUCUGCCUUUCACCACAUGGCCUUGCCUCGGUGGCCCUGACUGUCAGGGAGGGCCAGGGAGGCAGAGCGGGAGGGAGUCUCAGGAGGAGGCUGCCCUGAGGGGCUGGGGAGGGGGUACCUCAUGAGGACCAGGGUGGAGCUGAGAAGAGGAGGAGGUGGGGGCUGGAGGUGCUGGUAGCUGAGGGGACGGGCAAGUGAGAGGGGAGGGAGGGAAGUCCUGGGAGGAUCCUGAGCUGCUGUUGCAGUCUAACCCACUAAUCAGUUCUUAGAUUCAGGGGAAGGGCAGGCACCAACAACUCAGAAUGGGGGCUUUCGGGGAGGGCGCCUAGUCCCCCCAGCUCUAAGCAGCCAGGAGGGACCUGCAUCUAAGCAUCUGGGUUGCCAUGGCAAUGGCAUGCCCCCCAGCUACUGUAUGCCCCCGACCCCCGCAGAGGCAGAAUGAACCCAUAGGGAGCUGAUCGUAAUGUUUAUCAUGUUACUUCCCCACCCCUACAUUUUUUGAAAUAAAAUAAGGAAUUUUAUUCUCA
Sequence (MODOMICS CODE ENCODING)	AGAGACCUGAGGCUCGGGGCUGCAGAUGGAAUGCACGGCAGGGAGGCGGGACCCUUUGUUUGUGUGUGCGUGUUGUUGGCCUCCAUCCCCACUCCCCAGACUCCACUUCUCCAGGCCUCUCUCCCGCCUUUUCAUCCCGCAUCCGCAGGACACCCAAUCACCGGGCAACAGGAUGCCUUCCGCGCCUUCCACCCUGACCUGGAAUUCGUGGGCAAGUUCUUGAAACCCCUGCUGAUUGGUGAACUGGCCCCGGAGGAGCCCAGCCAGGACCACGGCAAGAACUCAAAGAUCACUGAGGACUUCCGGGCCCUGAGGAAGACGGCUGAGGACAUGAACCUGUUCAAGACCAACCACGUGUUCUUCCUCCUCCUCCUGGCCCACAUCAUCGCCCUGGAGAGCAUUGCAUGGUUCACUGUCUUUUACUUUGGCAAUGGCUGGAUUCCUACCCUCAUCACGGCCUUUGUCCUUGCUACCUCUCAGGCCCAAGCUGGAUGGCUGCAACAUGAUUAUGGCCACCUGUCUGUCUAC2000000006AGAAAACCCAAGUGGA2000000006ACCACCUUGUCCACAAAUUCGUCAUUGGCCACUUAAAGGGUGCCUCUGCCAACUGGUGGAAUCAUCGCCACUUCCAGCACCACGCCAAGCCUA2000000006ACAUCUUCCACAAGGAUCCCGAUGUGAACAUGCUGCACGUGUUUGUUCUGGGCGAAUGGCAGCCCAUCGAGUACGGCAAGAAGAAGCUGAAAUACCUGCCCUAC2000000006AAUCACCAGCACGAAUACUUCUUCCUGAUUGGGCCGCCGCUGCUCAUCCCCAUGUAUUUCCAGUACCAGAUCAUCAUGACCAUGAUCGUCCA2000000009UAAGAACUGGGUGGACCUGGCCUGGGCCGUCAGCUACUACAUCCGGUUCUUCAUCACCUAC2000000006A 2000000009UCCCUUUCUACGGCA2000000009UCCUGGGAGCCCUCCUUUUCCUCAACUUCAUCAGGUUCCUGGAGAGCCACUGGUUUGUGUGGGUCACACAGAUGAAUCACAUCGUCAUGGAGAUUGACCAGGAGGCCUACCGUGACUGGUUCAGUAGCCAGCUGACAGCCACCUGCAACGUGGAGCAGUCCUUCUUCAACGACUGGUUCAGUGGACACCUUA2000000006ACUUCCAGAUUGAGCACCACCUCUUCCCCACCAUGCCCCGGCACAACUUAC2000000006ACAAGAUCGCCCCGCUGGUGAAGUCUCUAUGUGCCAAGCAUGGCAUUGAAUACCAGGAGAAGCCGCUACUGAGGGCCCUGCUGGACAUCAUCAGGUCCCUGAAGAAGUCUGGGAAGCUGUGGCUGGACGCCUACCUUCACAAAUGAAGCCACAGCCCCCGGGACACCGUGGGGAAGGGGUGCAGGUGGGGUGAUGGCCAGAGGAAUGAUGGGCUUUUGUUCUGAGGGGUGUCCGAGAGGCUGGUGUAUGCACUGCUCACGGACCCCAUGUUGGAUCUUUCUCCCUUUCUCCUCUCCUUUUUCUCUUCACAUCUCCCCCAUAGCACCCUGCCCUCAUGGGACCUGCCCUCCCUCAGCCGUCAGCCAUCAGCCAUGGCCCUCCCAGUGCCUCCUAGCCCCUUCUUCCAAGGAGCAGAGAGGUGGCCACCGGGGGUGGCUCUGUCCUACCUCCACUCUCUGCCCCUAAAGAUGGGAGGAGACCAGCGGUCCAUGGGUCUGGCCUGUGAGUCUCCCCUUGCAGCCUGGUCACUAGGCAUCACCCCCGCUUUGGUUCUUCAGAUGCUCUUGGGGUUCAUAGGGGCAGGUCCUAGUCGGGCAGGGCCCCUGACCCUCCCGGCCUGGCUUCACUCUCCCUGACGGCUGCCAUUGGUCCACCCUUUCAUAGAGAGGCCUGCUUUGUUACAAAGCUCGGGUCUCCC2000000009UCCUGCAGCUCGGUUAAGUACCCGAGGCCUCUCUUAAGAUGUCCAGGGCCCCAGGCCCGCGGGCACAGCCAGCCCAAACCUUGGGCCCUGGAAGAGUCCUCCACCCCAUCACUAGAGUGCUCUGACCCUGGGCUUUCACGGGCCCCAUUCCACCGCCUCCCCAACUUGAGCCUGUGACCUUGGGACCAAAGGGGGAGUCCCUCGUCUCUUGUGACUCAGCAGAGGCAGUGGCCACGUUCAGGGAGGGGCCGGCUGGCCUGGAGGCUCAGCCCACCC2000000009UCCAGCUUUUCCUCAGGGUGUCCUGAGGUCCAAGAUUCUGGAGCAAUCUGACCCUUCUCCAAAGGCUCUGUUAUCAGCUGGGCAGUGCCAGCCAAUCCCUGGCCAU2000000009UUGGCCCCAGGGGACGUGGGCCCUGCAGGCUGCAGGAGGGCACUGGAGCUGGGAGGUCUCGUCCCAGCCCUCCCCAUCUCGGGGCUGCUGUGUGGACGGCGCUGCCUCAGGCACUCUCCUGUCUGAACCUGCCCUUACUGUGUUUAACCUGUUGCUCCAGGAUGCAUUCUGAUAGGAGGGGGCGGCAGGGCUGGGCCUUGUGACAAUCUGCCUUUCACCACAUGGCCUUGCCUCGGUGGCCCUGACUGUCAGGGAGGGCCAGGGAGGCAGAGCGGGAGGGAGUCUCAGGAGGAGGCUGCCCUGAGGGGCUGGGGAGGGGGUACCUCAUGAGGACCAGGGUGGAGCUGAGAAGAGGAGGAGGUGGGGGCUGGAGGUGCUGGUAGCUGAGGGGACGGGCAAGUGAGAGGGGAGGGAGGGAAGUCCUGGGAGGAUCCUGAGCUGCUGUUGCAGUCUAACCCACUAAUCAGUUCUUAGAUUCAGGGGAAGGGCAGGCACCAACAACUCAGAAUGGGGGCUUUCGGGGAGGGCGCCUAGUCCCCCCAGCUCUAAGCAGCCAGGAGGGACCUGCAUCUAAGCAUCUGGGUUGCCAUGGCAAUGGCAUGCCCCCCAGCUACUGUAUGCCCCCGACCCCCGCAGAGGCAGAAUGAACCCAUAGGGAGCUGAUCGUAAUGUUUAUCAUGUUACUUCCCCACCCCUACAUUUUUUGAAAUAAAAUAAGGAAUUUUAUUCUCA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and
evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered
as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors
should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected.
Class 4 is considered as questionable. Class 5 evidence means that
verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences.
Edit locations not originally present in the RNA sequences are marked by their source.
Their scores are in third row.}

Position in the Sequence	529	545	638	742	834	895	896	911	1103	1154	1851	2127	2233
Modification Positions	m6A	m6A	m6A	m6A	Y	m6A	Y	Y	m6A	m6A	Y	Y	Y
Genomic Coordinates	11:61840672:+	11:61840688:+	11:61848214:+	11:61857044:+	11:61857518:+	11:61863020:+	11:61863021:+	11:61863036:+	11:61863768:+	11:61865184:+	11:61866241:+	11:61866517:+	11:61866623:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	3kRDPWwiRCgi L6w2k2VEv4EY	bXBqJigD9oV3 eGNFqdoGxzRm f6YSioLdAWpr Yfn77uLS5tv8	bXBqJigD9oV3 eGNFqdoGxzRm f6YSioLdAWpr Yfn77uLS5tv8	3kRDPWwiRCgi L6w2k2VEv4EY	bXBqJigD9oV3 eGNFqdoGxzRm f6YSioLdAWpr Yfn77uLS5tv8	3kRDPWwiRCgi L6w2k2VEv4EY	bXBqJigD9oV3 eGNFqdoGxzRm f6YSioLdAWpr Yfn77uLS5tv8	bXBqJigD9oV3 eGNFqdoGxzRm f6YSioLdAWpr Yfn77uLS5tv8	bXBqJigD9oV3 eGNFqdoGxzRm f6YSioLdAWpr Yfn77uLS5tv8	3kRDPWwiRCgi L6w2k2VEv4EY	bXBqJigD9oV3 eGNFqdoGxzRm f6YSioLdAWpr kx7BHU7ZycYE Yfn77uLS5tv8	bXBqJigD9oV3 eGNFqdoGxzRm f6YSioLdAWpr kx7BHU7ZycYE Yfn77uLS5tv8	bXBqJigD9oV3 eGNFqdoGxzRm f6YSioLdAWpr kx7BHU7ZycYE JkWoGWVwjNda Yfn77uLS5tv8