General Data

RNA Type	unknown
Original Source	Sci-ModoM
Transcript ID:	ENST00000527183
Gene ID:	ENSG00000109929
Gene Name:	SC5D
Sequence (UNICHARACTER ENCODING)	AGGAACAAAAAAUUAUAUACUAGAGUAAUGAAUUGGCUGGGCUUUGAAAAAUGGAUAUGAUUAUGAGUUAAAAUAAAGGGAGAGAGGACAUUUUAGGUUCUUGAACCCCUAUGAUGAAAGAUACAGAGGUAAAACUUCCAAGACAGUGGGAGGACAUUGAGUAAACCUGCCUGGUUAGAGUAGAAAUACAGGAGUGAUGAGGUUGGAAAGAUCCGAAAGGGGUGGAGUAUGGAAUAAAUGCUAAAUUUAAAGUAUUUAGUGGAAAGUAUAUUUUAAGCAGGGAGAUAAUGUGUAAAGAUGGGUUUUAGGAAGAUUAAUAUGAAGGAAGUGAUGAUUCCCAGAGAUUUAAAUAAUAAAGAUGUCUUAGGAGUAUCCUGUCUCACAAAUAUCUUUAUAGUUUAAUUAAGAAGUACUUUAGGUAGAACAUUUCAAGUACUUAUGCGAGGGAAAUGAGGAAAUGACCAGAUUCCAAGAAGCCAAGAGAGAUUAGUUUAUAAUAUACUGAAUUAGCCAGAACAGAUCAUUUAUAAUGUUUGAGUCUAGGAUCCCAUUUUGCACUCAGAUGGACAUGUGAAAAGUGAACUCUAAUCCCAGGAGCUGAGUUUUGAUUCUUCUGUUUCCCGUUUUCUUUUCUAGGAUUGUUUGAACUUGUCGUUAGUAUAAUAUCUUUCCUCUUUUUCACUGACAUGUUCAUCUACUGGAUUCACAGAGGCCUUCAUCAUAGACUGGUAUAUAAGCGCCUACЖUAAACCUCACCAUAUUUGGAAGAUUCCUACUCCAUUUGCAAGUCAUGCUUUUCACCCUAUUGAUGGCUUUCUUCAGAGUCUACCUUACCAUAUAUACCCUUUUAUCUUUCCAUUACACAAGGUGGUUUAUUUAAGUCUGUACAUCUUGGUUAAUAUCUGGЖCAAUUUCCAUUCAUGACGGUGAUUUUCGUGUCCCCCAAAUCUUACAGCCAUUUAUUAAUGGCUCAGCUCAUCAUACЖGACCACCAUAUGUUCUUUGACUAUAAUUAUGGЖCAAUAUUUCACUUUGUGGGAUAGGAUUGGCGGCUCAUUCAAAAAUCCUUCAPCCUUUGAGGGGAAGGGACCGCUCAGUUAUGUGAAGGAGAUGACAGAGGGAAAGCGCAGCAGCCAUUCAGGAAAUGGCUGUAAGAAUGAAAAAUUAUUCAAUGGAGAGUUUACAAAGЖCUGAAUAGAUUAUUGCCCAGUUAUUCUUAAGUAAGGACAAAGAAGGAAAUAUCAUCGUAUUUCUUUUUUUUAAUAAGGAAAAAAUAAUAUCCAUACAGUCAAGAUACAUAGUAAAUGGUAUCAUUUGGAAAUCAGCAUCGUGGGCACUGCUGAGGAAUGAUCCUAGUGGUAGGUCAGAAGAAGAUGCUGUGAACACCAGGЖCUPUAAUCUUAUGCUUAAAAUGCCAGAUGUUGUUCGGGGGACAACUUGUAUCUUUCUAGCAGCAGAUCUGUAGUUUGUAUAGCCUCAACAACAAUUUUAAAUAAGAUGGAGAAUAAAUUAUUGAGGGGACUAGGCUAU
Sequence (SHORT NAMES ENCODING)	AGGAACAAAAAAUUAUAUACUAGAGUAAUGAAUUGGCUGGGCUUUGAAAAAUGGAUAUGAUUAUGAGUUAAAAUAAAGGGAGAGAGGACAUUUUAGGUUCUUGAACCCCUAUGAUGAAAGAUACAGAGGUAAAACUUCCAAGACAGUGGGAGGACAUUGAGUAAACCUGCCUGGUUAGAGUAGAAAUACAGGAGUGAUGAGGUUGGAAAGAUCCGAAAGGGGUGGAGUAUGGAAUAAAUGCUAAAUUUAAAGUAUUUAGUGGAAAGUAUAUUUUAAGCAGGGAGAUAAUGUGUAAAGAUGGGUUUUAGGAAGAUUAAUAUGAAGGAAGUGAUGAUUCCCAGAGAUUUAAAUAAUAAAGAUGUCUUAGGAGUAUCCUGUCUCACAAAUAUCUUUAUAGUUUAAUUAAGAAGUACUUUAGGUAGAACAUUUCAAGUACUUAUGCGAGGGAAAUGAGGAAAUGACCAGAUUCCAAGAAGCCAAGAGAGAUUAGUUUAUAAUAUACUGAAUUAGCCAGAACAGAUCAUUUAUAAUGUUUGAGUCUAGGAUCCCAUUUUGCACUCAGAUGGACAUGUGAAAAGUGAACUCUAAUCCCAGGAGCUGAGUUUUGAUUCUUCUGUUUCCCGUUUUCUUUUCUAGGAUUGUUUGAACUUGUCGUUAGUAUAAUAUCUUUCCUCUUUUUCACUGACAUGUUCAUCUACUGGAUUCACAGAGGCCUUCAUCAUAGACUGGUAUAUAAGCGCCUACm6AUAAACCUCACCAUAUUUGGAAGAUUCCUACUCCAUUUGCAAGUCAUGCUUUUCACCCUAUUGAUGGCUUUCUUCAGAGUCUACCUUACCAUAUAUACCCUUUUAUCUUUCCAUUACACAAGGUGGUUUAUUUAAGUCUGUACAUCUUGGUUAAUAUCUGGm6ACAAUUUCCAUUCAUGACGGUGAUUUUCGUGUCCCCCAAAUCUUACAGCCAUUUAUUAAUGGCUCAGCUCAUCAUACm6AGACCACCAUAUGUUCUUUGACUAUAAUUAUGGm6ACAAUAUUUCACUUUGUGGGAUAGGAUUGGCGGCUCAUUCAAAAAUCCUUCAYCCUUUGAGGGGAAGGGACCGCUCAGUUAUGUGAAGGAGAUGACAGAGGGAAAGCGCAGCAGCCAUUCAGGAAAUGGCUGUAAGAAUGAAAAAUUAUUCAAUGGAGAGUUUACAAAGm6ACUGAAUAGAUUAUUGCCCAGUUAUUCUUAAGUAAGGACAAAGAAGGAAAUAUCAUCGUAUUUCUUUUUUUUAAUAAGGAAAAAAUAAUAUCCAUACAGUCAAGAUACAUAGUAAAUGGUAUCAUUUGGAAAUCAGCAUCGUGGGCACUGCUGAGGAAUGAUCCUAGUGGUAGGUCAGAAGAAGAUGCUGUGAACACCAGGm6ACUYUAAUCUUAUGCUUAAAAUGCCAGAUGUUGUUCGGGGGACAACUUGUAUCUUUCUAGCAGCAGAUCUGUAGUUUGUAUAGCCUCAACAACAAUUUUAAAUAAGAUGGAGAAUAAAUUAUUGAGGGGACUAGGCUAU
Sequence (MODOMICS CODE ENCODING)	AGGAACAAAAAAUUAUAUACUAGAGUAAUGAAUUGGCUGGGCUUUGAAAAAUGGAUAUGAUUAUGAGUUAAAAUAAAGGGAGAGAGGACAUUUUAGGUUCUUGAACCCCUAUGAUGAAAGAUACAGAGGUAAAACUUCCAAGACAGUGGGAGGACAUUGAGUAAACCUGCCUGGUUAGAGUAGAAAUACAGGAGUGAUGAGGUUGGAAAGAUCCGAAAGGGGUGGAGUAUGGAAUAAAUGCUAAAUUUAAAGUAUUUAGUGGAAAGUAUAUUUUAAGCAGGGAGAUAAUGUGUAAAGAUGGGUUUUAGGAAGAUUAAUAUGAAGGAAGUGAUGAUUCCCAGAGAUUUAAAUAAUAAAGAUGUCUUAGGAGUAUCCUGUCUCACAAAUAUCUUUAUAGUUUAAUUAAGAAGUACUUUAGGUAGAACAUUUCAAGUACUUAUGCGAGGGAAAUGAGGAAAUGACCAGAUUCCAAGAAGCCAAGAGAGAUUAGUUUAUAAUAUACUGAAUUAGCCAGAACAGAUCAUUUAUAAUGUUUGAGUCUAGGAUCCCAUUUUGCACUCAGAUGGACAUGUGAAAAGUGAACUCUAAUCCCAGGAGCUGAGUUUUGAUUCUUCUGUUUCCCGUUUUCUUUUCUAGGAUUGUUUGAACUUGUCGUUAGUAUAAUAUCUUUCCUCUUUUUCACUGACAUGUUCAUCUACUGGAUUCACAGAGGCCUUCAUCAUAGACUGGUAUAUAAGCGCCUAC2000000006AUAAACCUCACCAUAUUUGGAAGAUUCCUACUCCAUUUGCAAGUCAUGCUUUUCACCCUAUUGAUGGCUUUCUUCAGAGUCUACCUUACCAUAUAUACCCUUUUAUCUUUCCAUUACACAAGGUGGUUUAUUUAAGUCUGUACAUCUUGGUUAAUAUCUGG2000000006ACAAUUUCCAUUCAUGACGGUGAUUUUCGUGUCCCCCAAAUCUUACAGCCAUUUAUUAAUGGCUCAGCUCAUCAUAC2000000006AGACCACCAUAUGUUCUUUGACUAUAAUUAUGG2000000006ACAAUAUUUCACUUUGUGGGAUAGGAUUGGCGGCUCAUUCAAAAAUCCUUCA2000000009UCCUUUGAGGGGAAGGGACCGCUCAGUUAUGUGAAGGAGAUGACAGAGGGAAAGCGCAGCAGCCAUUCAGGAAAUGGCUGUAAGAAUGAAAAAUUAUUCAAUGGAGAGUUUACAAAG2000000006ACUGAAUAGAUUAUUGCCCAGUUAUUCUUAAGUAAGGACAAAGAAGGAAAUAUCAUCGUAUUUCUUUUUUUUAAUAAGGAAAAAAUAAUAUCCAUACAGUCAAGAUACAUAGUAAAUGGUAUCAUUUGGAAAUCAGCAUCGUGGGCACUGCUGAGGAAUGAUCCUAGUGGUAGGUCAGAAGAAGAUGCUGUGAACACCAGG2000000006ACU2000000009UUAAUCUUAUGCUUAAAAUGCCAGAUGUUGUUCGGGGGACAACUUGUAUCUUUCUAGCAGCAGAUCUGUAGUUUGUAUAGCCUCAACAACAAUUUUAAAUAAGAUGGAGAAUAAAUUAUUGAGGGGACUAGGCUAU

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	745	906	983	1016	1068	1185	1386	1389
Modification Positions	m6A	m6A	m6A	m6A	Y	m6A	m6A	Y
Genomic Coordinates	11:121307064:+	11:121307225:+	11:121307302:+	11:121307335:+	11:121307387:+	11:121307504:+	11:121307705:+	11:121307708:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	3kRDPWwiRCgi L6w2k2VEv4EY	4HMi5ykupT9V 5aTkEfEpX8Xm 6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U D6ncpa2PPWj3 ArijeGVTwYBw nfCHyrYzE6fB BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq bXBqJigD9oV3 eGNFqdoGxzRm iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	3kRDPWwiRCgi L6w2k2VEv4EY	4HMi5ykupT9V 5aTkEfEpX8Xm msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL aJksAshEgQ8U D6ncpa2PPWj3 8cMbzB4aD5Se BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq dknfVe6BK8aP eGNFqdoGxzRm XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP eGNFqdoGxzRm iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	4HMi5ykupT9V 5aTkEfEpX8Xm aJksAshEgQ8U nfCHyrYzE6fB Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP eGNFqdoGxzRm oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	4HMi5ykupT9V 5aTkEfEpX8Xm 6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U D6ncpa2PPWj3 8cMbzB4aD5Se ArijeGVTwYBw KTLz8piFYdwC WiQcrNTGZHPT BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP eGNFqdoGxzRm oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP eGNFqdoGxzRm oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8