General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000528853
Gene ID:	ENSG00000131626
Gene Name:	PPFIA1
Sequence (UNICHARACTER ENCODING)	AGGAGAUCAUGUCGCUGACCAGCCCGUCUGCCCCGCCCACAUCUAGAACGACACUCGCCUAUGGGGACAUGAACCACGAGUGGAUCGGCAACGAGUGGCUCCCCAGCCUGGGCCUCCCCCAGUACCGCAGCUACUUCAUGGAGUGCCUUGUAGACGCCAGGAUGCUGGACCACUUGACCAAGAAAGACCUUCGAGGGCAGCUGAAAAUGGUCGACAGUUUUCACAGAAACAGUUUCCAGUGUGGAAUUAUGUGCCUGAGAAGGUUAAAUUAUGACCGGAAAGAACUGGAAAGAAAAAGAGAAGAAAGUCAGAGUGAAAUAAAAGACGUGCUUGUUUGGAGCAAUGAUCGAGUGAUUCGCUGGAUCCUGUCAAUUGGCCUUAAAGAAUAUGCAAACAAUCUUAUAGAGAGUGGUGUUCACGGAGCACUUCUGGCCUUAGAUGAAACCUUCGACUUCAGUGCACUGGCACUGCUGUUACAGAUCCCGACGCAGAACACACAGGCUCGUGCUGUCUUGGAAAGAGAAUUUAЖCAACCUUUUGGUCAUGGGGACUGAUAGAAGGUUUGAUGAAGAUGAUGAUAAAAGCUPUAGGAGAGCACCUUCAUGGAGAAAAAAGUUUAGACCAAAGGACAUUCGUGGCUUAGCUGCUGGGUCAGCAGAGACUCUCCCUGCAAACUUCCGGGUGACUUCUUCUAUGUCUUCCCCCUCUAUGCAGCCAAAGAAGAUGCAGAUGGACGUUUACCCACACUACUUCUACAGAUGAUUAUGCAGCAUUUGAAUCCAACAAAGACUACAUUUUGGAAUCCAGUGGAAUCUPUAAUCUUGUUAAUACUUGUUAUAUGGЖCCCUAAGAUAUUUUAUUACAGAGUUUUUAAUUAGUGAAAAAUUCAUGAAUACCAUAGAGAAAAUAUUUUAGAAUUUAAUGUUUCUUAUAUUUAUGUAAACUUAUGACUCUUCAUUUAUAUAGUUACUUACUUUUUCAUGUAUAUCCAGGCUAUAAAUAUCCUUUCAAAUCAUGUUCUUAUACCUAAUUUUAGUCUUUCAAAUGAAUGUACUGUAAUGCUUGUAUGUAUAAAUCCUAUGAAUAGAGGGCUUUUGUAAAUUAUGCAUUUAUUGUAAUUAUCAUUAAUUUUUUAAUGAUAAACCAUGACAAAGGAUUUUACGUUUAUAAAAUUAUGACAGAAGCCAUGUGCAUUAUCCUPUACGGACGCAGCCUAGCUCUACAGCAAUCAPCCUGAAAUAAGCAUACCUAAUUUCAAGCAAUUGUUGUAUUUUCAUGACUGЖCCUUAACUGUACUUUUUCUAGCAAGAGAUGCUPUAUUCUGCAGCAUGAACAGAUUUAAAAUGGCUGGUGUUAAAUAUCAGC
Sequence (SHORT NAMES ENCODING)	AGGAGAUCAUGUCGCUGACCAGCCCGUCUGCCCCGCCCACAUCUAGAACGACACUCGCCUAUGGGGACAUGAACCACGAGUGGAUCGGCAACGAGUGGCUCCCCAGCCUGGGCCUCCCCCAGUACCGCAGCUACUUCAUGGAGUGCCUUGUAGACGCCAGGAUGCUGGACCACUUGACCAAGAAAGACCUUCGAGGGCAGCUGAAAAUGGUCGACAGUUUUCACAGAAACAGUUUCCAGUGUGGAAUUAUGUGCCUGAGAAGGUUAAAUUAUGACCGGAAAGAACUGGAAAGAAAAAGAGAAGAAAGUCAGAGUGAAAUAAAAGACGUGCUUGUUUGGAGCAAUGAUCGAGUGAUUCGCUGGAUCCUGUCAAUUGGCCUUAAAGAAUAUGCAAACAAUCUUAUAGAGAGUGGUGUUCACGGAGCACUUCUGGCCUUAGAUGAAACCUUCGACUUCAGUGCACUGGCACUGCUGUUACAGAUCCCGACGCAGAACACACAGGCUCGUGCUGUCUUGGAAAGAGAAUUUAm6ACAACCUUUUGGUCAUGGGGACUGAUAGAAGGUUUGAUGAAGAUGAUGAUAAAAGCUYUAGGAGAGCACCUUCAUGGAGAAAAAAGUUUAGACCAAAGGACAUUCGUGGCUUAGCUGCUGGGUCAGCAGAGACUCUCCCUGCAAACUUCCGGGUGACUUCUUCUAUGUCUUCCCCCUCUAUGCAGCCAAAGAAGAUGCAGAUGGACGUUUACCCACACUACUUCUACAGAUGAUUAUGCAGCAUUUGAAUCCAACAAAGACUACAUUUUGGAAUCCAGUGGAAUCUYUAAUCUUGUUAAUACUUGUUAUAUGGm6ACCCUAAGAUAUUUUAUUACAGAGUUUUUAAUUAGUGAAAAAUUCAUGAAUACCAUAGAGAAAAUAUUUUAGAAUUUAAUGUUUCUUAUAUUUAUGUAAACUUAUGACUCUUCAUUUAUAUAGUUACUUACUUUUUCAUGUAUAUCCAGGCUAUAAAUAUCCUUUCAAAUCAUGUUCUUAUACCUAAUUUUAGUCUUUCAAAUGAAUGUACUGUAAUGCUUGUAUGUAUAAAUCCUAUGAAUAGAGGGCUUUUGUAAAUUAUGCAUUUAUUGUAAUUAUCAUUAAUUUUUUAAUGAUAAACCAUGACAAAGGAUUUUACGUUUAUAAAAUUAUGACAGAAGCCAUGUGCAUUAUCCUYUACGGACGCAGCCUAGCUCUACAGCAAUCAYCCUGAAAUAAGCAUACCUAAUUUCAAGCAAUUGUUGUAUUUUCAUGACUGm6ACCUUAACUGUACUUUUUCUAGCAAGAGAUGCUYUAUUCUGCAGCAUGAACAGAUUUAAAAUGGCUGGUGUUAAAUAUCAGC
Sequence (MODOMICS CODE ENCODING)	AGGAGAUCAUGUCGCUGACCAGCCCGUCUGCCCCGCCCACAUCUAGAACGACACUCGCCUAUGGGGACAUGAACCACGAGUGGAUCGGCAACGAGUGGCUCCCCAGCCUGGGCCUCCCCCAGUACCGCAGCUACUUCAUGGAGUGCCUUGUAGACGCCAGGAUGCUGGACCACUUGACCAAGAAAGACCUUCGAGGGCAGCUGAAAAUGGUCGACAGUUUUCACAGAAACAGUUUCCAGUGUGGAAUUAUGUGCCUGAGAAGGUUAAAUUAUGACCGGAAAGAACUGGAAAGAAAAAGAGAAGAAAGUCAGAGUGAAAUAAAAGACGUGCUUGUUUGGAGCAAUGAUCGAGUGAUUCGCUGGAUCCUGUCAAUUGGCCUUAAAGAAUAUGCAAACAAUCUUAUAGAGAGUGGUGUUCACGGAGCACUUCUGGCCUUAGAUGAAACCUUCGACUUCAGUGCACUGGCACUGCUGUUACAGAUCCCGACGCAGAACACACAGGCUCGUGCUGUCUUGGAAAGAGAAUUUA2000000006ACAACCUUUUGGUCAUGGGGACUGAUAGAAGGUUUGAUGAAGAUGAUGAUAAAAGCU2000000009UUAGGAGAGCACCUUCAUGGAGAAAAAAGUUUAGACCAAAGGACAUUCGUGGCUUAGCUGCUGGGUCAGCAGAGACUCUCCCUGCAAACUUCCGGGUGACUUCUUCUAUGUCUUCCCCCUCUAUGCAGCCAAAGAAGAUGCAGAUGGACGUUUACCCACACUACUUCUACAGAUGAUUAUGCAGCAUUUGAAUCCAACAAAGACUACAUUUUGGAAUCCAGUGGAAUCU2000000009UUAAUCUUGUUAAUACUUGUUAUAUGG2000000006ACCCUAAGAUAUUUUAUUACAGAGUUUUUAAUUAGUGAAAAAUUCAUGAAUACCAUAGAGAAAAUAUUUUAGAAUUUAAUGUUUCUUAUAUUUAUGUAAACUUAUGACUCUUCAUUUAUAUAGUUACUUACUUUUUCAUGUAUAUCCAGGCUAUAAAUAUCCUUUCAAAUCAUGUUCUUAUACCUAAUUUUAGUCUUUCAAAUGAAUGUACUGUAAUGCUUGUAUGUAUAAAUCCUAUGAAUAGAGGGCUUUUGUAAAUUAUGCAUUUAUUGUAAUUAUCAUUAAUUUUUUAAUGAUAAACCAUGACAAAGGAUUUUACGUUUAUAAAAUUAUGACAGAAGCCAUGUGCAUUAUCCU2000000009UUACGGACGCAGCCUAGCUCUACAGCAAUCA2000000009UCCUGAAAUAAGCAUACCUAAUUUCAAGCAAUUGUUGUAUUUUCAUGACUG2000000006ACCUUAACUGUACUUUUUCUAGCAAGAGAUGCU2000000009UUAUUCUGCAGCAUGAACAGAUUUAAAAUGGCUGGUGUUAAAUAUCAGC

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	529	586	815	842	1199	1230	1281	1314
Modification Positions	m6A	Y	Y	m6A	Y	Y	m6A	Y
Genomic Coordinates	11:70376560:+	11:70378046:+	11:70383082:+	11:70383109:+	11:70383466:+	11:70383497:+	11:70383548:+	11:70383581:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	93arJtwJmuS9 KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 PF5iqBNSbHaa UKen6WEino9G BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	KTLz8piFYdwC nfCHyrYzE6fB WiQcrNTGZHPT BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8