General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000375615
Gene ID:	ENSG00000204381
Gene Name:	LAYN
Sequence (UNICHARACTER ENCODING)	AGUGACGUCCCAGGGGGCGGAGGGGCGACCGACUGACUCCGCGCCCUCCCCCCCGCCUCCCGUGCGGUCCGUCGGUGGCCUAGAGAUGCUGCUGCCGCGGUUGCAGUUGUCGCGCACGCCUCUGCCCGCCAGCCCGCUCCACCGCCGUAGCGCCCGAGUGUCGGGGGGCGCACCCGAGUCGGGCCAUGAGGCCGGGAACCGCGCUACAGGCCGUGCUGCUGGCCGUGCUGCUGGUGGGGCUGCGGGCCGCGACGGGUCGCCUGCUGAGUGCCUCGGAUUUGGACCUCAGAGGAGGGCAGCCAGUCUGCCGGGGAGGGACACAGAGGCCUUGUUAUAAAGUCAUUUACUUCCAUGAUACUUCUCGAAGACUGAACUUUGAGGAAGCCAAAGAAGCCUGCAGGAGGGAUGGAGGCCAGCUAGUCAGCAUCGAGUCUGAAGAUGAACAGAAACUGAUAGAAAAGUUCAUUGAAAACCUCUUGCCAUCUGAUGGUGACUUCUGGAUUGGGCUCAGGAGGCGUGAGGAGAAACAAAGCAAUAGCACAGCCUGCCAGGACCUPUAUGCUUGGЖCUGAUGGCAGCAUAUCACAAUUUAGGAACUGGUAUGUGGAUGAGCCAUCCUGCGGCAGCGAGGUCUGCGUGGUCAUGUACCAUCAGCCAUCGGCACCCGCUGGCAUCGGAGGCCCCUACAUGUUCCAGUGGAAUGAUGACCGGUGCAACAUGAAGAACAAUUUCAUUUGCAAAUAUUCUGAUGAGAAACCAGCAGUUCCUUCUAGAGAAGCUGAAGGUGAGGAAACAGAGCUGACAACACCUGUACUUCCAGAAGAAACACAGGAAGAAGAUGCCAAAAAAACAUUUAAAGAAAGUAGAGAAGCUGCCUUGAAUCUGGCCUACAPCCUAAUCCCCAGCAUUCCCCUUCUCCPCCUCCUUGUGGUCACCACAGUUGUAUGUUGGGUUUGGAUCUGUAGAAAAAGAAAACGGGAGCAGCCAGACCCUAGCACAAAGAAGCAACACACCAUCUGGCCCUCUCCUCACCAGGGAAACAGCCCGGACCUAGAGGUCUACAAUGUCAUAAGAAAACAAAGCGAAGCUGACUUAGCUGAGACCCGGCCAGACCUGAAGAAUAUUUCAUUCCGAGUGUGUUCGGGAGAAGCCACUCCCGAUGACAUGUCUUGUGЖCUAUGACAACAUGGCUGUGAACCCAUCAGAAAGUGGGUUUGUGЖCUCUGGUGAGCGUGGAGAGUGGAUUUGUGACCAAUGACAUUUAUGAGUUCUCCCCAGACCAAAUGGGGAGGAGUAAGGAGUCUGGAUGGGUGGAAAAUGAAAUAUAUGGUUAUUAGGACAUAUAAAAAACUGAAACUGACAACAAUGGAAAAGAAAUGAUAAGCAAAAUCCUCUUAUUUUCUAUAAGGAAAAUACACAGAAGGUCUAUGAACAAGCUUAGAUCAGGUCCUGUGGAUGAGCAUGUGGUCCCCACGACCUCCUGUUGGACCCCCACGUUUUGGCUGUAUCCUPUAUCCCAGCCAGUCAPCCAGCUCGACCUUAUGAGAAGGUACCUUGCCCAGGUCUGGCACAUAGUAGAGUCUCAAUAAAUGUCACUUGGUUGGUUGUAUCUAACUUUUAAGGGACAGAGCUPUACCUGGCAGUGAUAAAGAUGGGCUGUGGAGCUUGGAAAACCACCUCUGUUUUCCUUGCUCUAUACAGCAGCACAUAUUAUCAUACAGACAGAAAAUCCAGAAUCUUUUCAAAGCCCACAUAUGGUAGCACAGGCUGGCCUGUGCAUCGGCAAUUCUCAUAUCUGUUUUUUUCAAAGAAUAAUAAAAUCAAAUAAAGAGCAGGAAA
Sequence (SHORT NAMES ENCODING)	AGUGACGUCCCAGGGGGCGGAGGGGCGACCGACUGACUCCGCGCCCUCCCCCCCGCCUCCCGUGCGGUCCGUCGGUGGCCUAGAGAUGCUGCUGCCGCGGUUGCAGUUGUCGCGCACGCCUCUGCCCGCCAGCCCGCUCCACCGCCGUAGCGCCCGAGUGUCGGGGGGCGCACCCGAGUCGGGCCAUGAGGCCGGGAACCGCGCUACAGGCCGUGCUGCUGGCCGUGCUGCUGGUGGGGCUGCGGGCCGCGACGGGUCGCCUGCUGAGUGCCUCGGAUUUGGACCUCAGAGGAGGGCAGCCAGUCUGCCGGGGAGGGACACAGAGGCCUUGUUAUAAAGUCAUUUACUUCCAUGAUACUUCUCGAAGACUGAACUUUGAGGAAGCCAAAGAAGCCUGCAGGAGGGAUGGAGGCCAGCUAGUCAGCAUCGAGUCUGAAGAUGAACAGAAACUGAUAGAAAAGUUCAUUGAAAACCUCUUGCCAUCUGAUGGUGACUUCUGGAUUGGGCUCAGGAGGCGUGAGGAGAAACAAAGCAAUAGCACAGCCUGCCAGGACCUYUAUGCUUGGm6ACUGAUGGCAGCAUAUCACAAUUUAGGAACUGGUAUGUGGAUGAGCCAUCCUGCGGCAGCGAGGUCUGCGUGGUCAUGUACCAUCAGCCAUCGGCACCCGCUGGCAUCGGAGGCCCCUACAUGUUCCAGUGGAAUGAUGACCGGUGCAACAUGAAGAACAAUUUCAUUUGCAAAUAUUCUGAUGAGAAACCAGCAGUUCCUUCUAGAGAAGCUGAAGGUGAGGAAACAGAGCUGACAACACCUGUACUUCCAGAAGAAACACAGGAAGAAGAUGCCAAAAAAACAUUUAAAGAAAGUAGAGAAGCUGCCUUGAAUCUGGCCUACAYCCUAAUCCCCAGCAUUCCCCUUCUCCYCCUCCUUGUGGUCACCACAGUUGUAUGUUGGGUUUGGAUCUGUAGAAAAAGAAAACGGGAGCAGCCAGACCCUAGCACAAAGAAGCAACACACCAUCUGGCCCUCUCCUCACCAGGGAAACAGCCCGGACCUAGAGGUCUACAAUGUCAUAAGAAAACAAAGCGAAGCUGACUUAGCUGAGACCCGGCCAGACCUGAAGAAUAUUUCAUUCCGAGUGUGUUCGGGAGAAGCCACUCCCGAUGACAUGUCUUGUGm6ACUAUGACAACAUGGCUGUGAACCCAUCAGAAAGUGGGUUUGUGm6ACUCUGGUGAGCGUGGAGAGUGGAUUUGUGACCAAUGACAUUUAUGAGUUCUCCCCAGACCAAAUGGGGAGGAGUAAGGAGUCUGGAUGGGUGGAAAAUGAAAUAUAUGGUUAUUAGGACAUAUAAAAAACUGAAACUGACAACAAUGGAAAAGAAAUGAUAAGCAAAAUCCUCUUAUUUUCUAUAAGGAAAAUACACAGAAGGUCUAUGAACAAGCUUAGAUCAGGUCCUGUGGAUGAGCAUGUGGUCCCCACGACCUCCUGUUGGACCCCCACGUUUUGGCUGUAUCCUYUAUCCCAGCCAGUCAYCCAGCUCGACCUUAUGAGAAGGUACCUUGCCCAGGUCUGGCACAUAGUAGAGUCUCAAUAAAUGUCACUUGGUUGGUUGUAUCUAACUUUUAAGGGACAGAGCUYUACCUGGCAGUGAUAAAGAUGGGCUGUGGAGCUUGGAAAACCACCUCUGUUUUCCUUGCUCUAUACAGCAGCACAUAUUAUCAUACAGACAGAAAAUCCAGAAUCUUUUCAAAGCCCACAUAUGGUAGCACAGGCUGGCCUGUGCAUCGGCAAUUCUCAUAUCUGUUUUUUUCAAAGAAUAAUAAAAUCAAAUAAAGAGCAGGAAA
Sequence (MODOMICS CODE ENCODING)	AGUGACGUCCCAGGGGGCGGAGGGGCGACCGACUGACUCCGCGCCCUCCCCCCCGCCUCCCGUGCGGUCCGUCGGUGGCCUAGAGAUGCUGCUGCCGCGGUUGCAGUUGUCGCGCACGCCUCUGCCCGCCAGCCCGCUCCACCGCCGUAGCGCCCGAGUGUCGGGGGGCGCACCCGAGUCGGGCCAUGAGGCCGGGAACCGCGCUACAGGCCGUGCUGCUGGCCGUGCUGCUGGUGGGGCUGCGGGCCGCGACGGGUCGCCUGCUGAGUGCCUCGGAUUUGGACCUCAGAGGAGGGCAGCCAGUCUGCCGGGGAGGGACACAGAGGCCUUGUUAUAAAGUCAUUUACUUCCAUGAUACUUCUCGAAGACUGAACUUUGAGGAAGCCAAAGAAGCCUGCAGGAGGGAUGGAGGCCAGCUAGUCAGCAUCGAGUCUGAAGAUGAACAGAAACUGAUAGAAAAGUUCAUUGAAAACCUCUUGCCAUCUGAUGGUGACUUCUGGAUUGGGCUCAGGAGGCGUGAGGAGAAACAAAGCAAUAGCACAGCCUGCCAGGACCU2000000009UUAUGCUUGG2000000006ACUGAUGGCAGCAUAUCACAAUUUAGGAACUGGUAUGUGGAUGAGCCAUCCUGCGGCAGCGAGGUCUGCGUGGUCAUGUACCAUCAGCCAUCGGCACCCGCUGGCAUCGGAGGCCCCUACAUGUUCCAGUGGAAUGAUGACCGGUGCAACAUGAAGAACAAUUUCAUUUGCAAAUAUUCUGAUGAGAAACCAGCAGUUCCUUCUAGAGAAGCUGAAGGUGAGGAAACAGAGCUGACAACACCUGUACUUCCAGAAGAAACACAGGAAGAAGAUGCCAAAAAAACAUUUAAAGAAAGUAGAGAAGCUGCCUUGAAUCUGGCCUACA2000000009UCCUAAUCCCCAGCAUUCCCCUUCUCC2000000009UCCUCCUUGUGGUCACCACAGUUGUAUGUUGGGUUUGGAUCUGUAGAAAAAGAAAACGGGAGCAGCCAGACCCUAGCACAAAGAAGCAACACACCAUCUGGCCCUCUCCUCACCAGGGAAACAGCCCGGACCUAGAGGUCUACAAUGUCAUAAGAAAACAAAGCGAAGCUGACUUAGCUGAGACCCGGCCAGACCUGAAGAAUAUUUCAUUCCGAGUGUGUUCGGGAGAAGCCACUCCCGAUGACAUGUCUUGUG2000000006ACUAUGACAACAUGGCUGUGAACCCAUCAGAAAGUGGGUUUGUG2000000006ACUCUGGUGAGCGUGGAGAGUGGAUUUGUGACCAAUGACAUUUAUGAGUUCUCCCCAGACCAAAUGGGGAGGAGUAAGGAGUCUGGAUGGGUGGAAAAUGAAAUAUAUGGUUAUUAGGACAUAUAAAAAACUGAAACUGACAACAAUGGAAAAGAAAUGAUAAGCAAAAUCCUCUUAUUUUCUAUAAGGAAAAUACACAGAAGGUCUAUGAACAAGCUUAGAUCAGGUCCUGUGGAUGAGCAUGUGGUCCCCACGACCUCCUGUUGGACCCCCACGUUUUGGCUGUAUCCU2000000009UUAUCCCAGCCAGUCA2000000009UCCAGCUCGACCUUAUGAGAAGGUACCUUGCCCAGGUCUGGCACAUAGUAGAGUCUCAAUAAAUGUCACUUGGUUGGUUGUAUCUAACUUUUAAGGGACAGAGCU2000000009UUACCUGGCAGUGAUAAAGAUGGGCUGUGGAGCUUGGAAAACCACCUCUGUUUUCCUUGCUCUAUACAGCAGCACAUAUUAUCAUACAGACAGAAAAUCCAGAAUCUUUUCAAAGCCCACAUAUGGUAGCACAGGCUGGCCUGUGCAUCGGCAAUUCUCAUAUCUGUUUUUUUCAAAGAAUAAUAAAAUCAAAUAAAGAGCAGGAAA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	557	567	892	919	1174	1218	1509	1525	1630
Modification Positions	Y	m6A	Y	Y	m6A	m6A	Y	Y	Y
Genomic Coordinates	11:111544185:+	11:111544195:+	11:111557565:+	11:111557592:+	11:111560298:+	11:111560342:+	11:111560633:+	11:111560649:+	11:111560754:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq Yfn77uLS5tv8	msuJfBpJvM5H VyCX26p5UBRL BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	4HMi5ykupT9V 5aTkEfEpX8Xm msuJfBpJvM5H VyCX26p5UBRL BtsJQJ3DteUq Yfn77uLS5tv8	aHkqKEJkRYyb msuJfBpJvM5H VyCX26p5UBRL BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8