General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000420986
Gene ID:	ENSG00000150776
Gene Name:	NKAPD1
Sequence (UNICHARACTER ENCODING)	AUAUCUAGUUCCGGAAUGUCCCCCUUCUGGUGCCAGGCUUGCUUUUCAGUUGGGCCUGACCCACUUCUCUUCCAGGAAAGCGCCCGCCUUCCUUCUGCACCCGUCAACCUCUGGAGUGUCCUGAAAACCCUCCCUUGUGGGAGUCUCUGGGCUGCCUGUUGGUGGGACGAUUUCUCAGGAGCACGACUUCCGGCCUGAAAAGGAAGUCUCCUCCUUUUUCUCCCAAACCACUUCUUCCCCCCUACCCCCCGCCACGCGAGGCUGCGGCGCACGAUUGAAGAAUGUCCCGGAUUCCACUGGGGAAGGUCCUCCUGAGGAAUGUCAUCCGGCACACAGAUGCUCACAAUAAGAUUCAGGAGGAAUCAGAUAUGUGGAAAAUAAGAGAACUGGAAAAACAGAUGGAAGAUGCUUACCGGGGGACCAAAAGGAAAAUGCUACCCAGCAGUUCAAGCCGGAUGCGCAGUGAUGGUUUUGAUGAAGAAAGUCAAAGAUACUAUUGGAGGCCAAAGAAUGAAAUUUCUGGGACACUGGAAGAUGAUUUUCUUAAGGCUAAAUCCUGGAAUAAAAAGUUCUAUGAUUAUGAAGCAAACAUGCCAGACAGAUGGGGUCACAGUGGUUAUAAAGAGUUAUACCCUGAAGAAUUUGAAACAGACAGUGAUCAGCAAGAUAUUACCAACGGGAAGAAAACAUCUCCCCAGGUAAAGUCAUCUACCCAUGAAUCCCGCAAACACAAGAAGUCAAAGAAAUCCCACAAAAAAAAGCAGAAAAAAAGGUCACACAAAAAACAGAAGAAAAGCAAAAAGGAAGCCACAGAUAUAACAGCAGAUUCCUCGAGUGAGUUCUCAGAAGAAACUGGGGCUUCUGGUACAAGGAAAGGGAAACAACCACAUAAACGCAAGAAAAAAUCCAGGAAAAAGUCUCUCAAAAAACCUGCUPUAUUCUUAGAGGCAGAAAGUAACACUUCACAUUCAGAUGAUUCAGCAUCCAGCAGUUCUGAGGAAAGUGAGGAAAGAGЖCACUAAGAAAACCAAAAGGAAAAAGAGAGAGAAAAAAGCCCAUACCUCUGUAGCCAACAAUGAAAUACAGGAGAGGЖCAAACAAACGCACAAAUUGGAAAGUAGCUACAGAUGAAAGGUCUGCUGAGAGCUCAGAGGAUGЖCUAAAUGGGAAACACUUUUGUUUUCCACAUGЖCUGUGGAUAUUUACAGUUCUUACUCCUUGUGGUUUUGCCAGUGЖCUCUUGUUCAGCACGGGGCCUGAGGUCAGAGCUGUCUUGUGCCAUCUGUAUGUUCUGACAGACGUCUUGUCUUCUAUUUUGGCGUUAAGCUUGAUCCCCUUUUCUUGUUAAAAGGGAAUCUGGUAUUUUGUUAUGAAGGUUUCUUGAAGAGAUUAUUUUUUUUUGCAAUUAAUUACGUUUAGUGUAGAGUGCAUAUACAGCAAAUUAAAGGACCCAGAAAGCUGGAUCCAAUAGUGACCUGGGUACACCAAUCGGAAUAUUGAЖUUUGGGGAAGUCAAGGGCUGGGAUCAAGAGGUGGAUUGGAACUAAUGCCAUGUAGGAUGGUAUGACAAGGCAACACUGUAUUGCUCUCUGUUUAUAUAGCAGGUGUCACAACUAЖCUUGUCUPUAGCCUUGGUGCUUUGAUCCUUCUAUAUUUUGACCCCACAGGUGUGGUCCGGUUUACUUAAUCAGGЖCAUGGGCCUAAGAACAAACCUUUUCCCUUCAUGAUAACAPCCAUAGACAACUUAUUAGAAGGGACUAGAGUUUUUGCAAAUUUCCCUGCUGGAUGGGGCCUAUAGCUAUACUUAGUAUAUGCCUAAЖCAUGGUAAUUGGAUAGUAAAUGGUUUUCUAGUUCCAUUGCUGUAUAUUUGCCUAAAUGGЖCUUGUGUUCAAAUUAUUUCUUCAAUUGUCAUAGAUAAUCCUGUACCAAAUGGGGAAGAAUUAGGAAAUAAUCAUGUUGUCUAAUGGUACUCUGGAUUCAGGGCAGCAACUGCCAUUUAAAUGUUGUCUUGUUCAUUUCUAAAUCUGUUCAUGAAGUUUAGGUUUUCCCUGAAACUAAGUUGAAUUAUUUCCAAAAUGAAACAGGCUUCUCAGGGACAUAUCCACUUCUUCCCAGUCUGCCUUUGGAUUAAAGCACCAAGCAGAGACCACAUUAAUUCCCUUUGCUAUACUGUGAUCCUUAGUAUGUUAAUUCUUAAGAAACCAACAUAUCACUGAAAGAAGGCUGGCAGAACGCAAGUGCAUUUUUUCACUGUGGGAAGAAAGAUCAAGUGACGUAUUAUUUUUUCCUGGUUGUCACUUAAUGGGCUGAGUAAAAAGCUUGAAAACUCA
Sequence (SHORT NAMES ENCODING)	AUAUCUAGUUCCGGAAUGUCCCCCUUCUGGUGCCAGGCUUGCUUUUCAGUUGGGCCUGACCCACUUCUCUUCCAGGAAAGCGCCCGCCUUCCUUCUGCACCCGUCAACCUCUGGAGUGUCCUGAAAACCCUCCCUUGUGGGAGUCUCUGGGCUGCCUGUUGGUGGGACGAUUUCUCAGGAGCACGACUUCCGGCCUGAAAAGGAAGUCUCCUCCUUUUUCUCCCAAACCACUUCUUCCCCCCUACCCCCCGCCACGCGAGGCUGCGGCGCACGAUUGAAGAAUGUCCCGGAUUCCACUGGGGAAGGUCCUCCUGAGGAAUGUCAUCCGGCACACAGAUGCUCACAAUAAGAUUCAGGAGGAAUCAGAUAUGUGGAAAAUAAGAGAACUGGAAAAACAGAUGGAAGAUGCUUACCGGGGGACCAAAAGGAAAAUGCUACCCAGCAGUUCAAGCCGGAUGCGCAGUGAUGGUUUUGAUGAAGAAAGUCAAAGAUACUAUUGGAGGCCAAAGAAUGAAAUUUCUGGGACACUGGAAGAUGAUUUUCUUAAGGCUAAAUCCUGGAAUAAAAAGUUCUAUGAUUAUGAAGCAAACAUGCCAGACAGAUGGGGUCACAGUGGUUAUAAAGAGUUAUACCCUGAAGAAUUUGAAACAGACAGUGAUCAGCAAGAUAUUACCAACGGGAAGAAAACAUCUCCCCAGGUAAAGUCAUCUACCCAUGAAUCCCGCAAACACAAGAAGUCAAAGAAAUCCCACAAAAAAAAGCAGAAAAAAAGGUCACACAAAAAACAGAAGAAAAGCAAAAAGGAAGCCACAGAUAUAACAGCAGAUUCCUCGAGUGAGUUCUCAGAAGAAACUGGGGCUUCUGGUACAAGGAAAGGGAAACAACCACAUAAACGCAAGAAAAAAUCCAGGAAAAAGUCUCUCAAAAAACCUGCUYUAUUCUUAGAGGCAGAAAGUAACACUUCACAUUCAGAUGAUUCAGCAUCCAGCAGUUCUGAGGAAAGUGAGGAAAGAGm6ACACUAAGAAAACCAAAAGGAAAAAGAGAGAGAAAAAAGCCCAUACCUCUGUAGCCAACAAUGAAAUACAGGAGAGGm6ACAAACAAACGCACAAAUUGGAAAGUAGCUACAGAUGAAAGGUCUGCUGAGAGCUCAGAGGAUGm6ACUAAAUGGGAAACACUUUUGUUUUCCACAUGm6ACUGUGGAUAUUUACAGUUCUUACUCCUUGUGGUUUUGCCAGUGm6ACUCUUGUUCAGCACGGGGCCUGAGGUCAGAGCUGUCUUGUGCCAUCUGUAUGUUCUGACAGACGUCUUGUCUUCUAUUUUGGCGUUAAGCUUGAUCCCCUUUUCUUGUUAAAAGGGAAUCUGGUAUUUUGUUAUGAAGGUUUCUUGAAGAGAUUAUUUUUUUUUGCAAUUAAUUACGUUUAGUGUAGAGUGCAUAUACAGCAAAUUAAAGGACCCAGAAAGCUGGAUCCAAUAGUGACCUGGGUACACCAAUCGGAAUAUUGAm6AUUUGGGGAAGUCAAGGGCUGGGAUCAAGAGGUGGAUUGGAACUAAUGCCAUGUAGGAUGGUAUGACAAGGCAACACUGUAUUGCUCUCUGUUUAUAUAGCAGGUGUCACAACUAm6ACUUGUCUYUAGCCUUGGUGCUUUGAUCCUUCUAUAUUUUGACCCCACAGGUGUGGUCCGGUUUACUUAAUCAGGm6ACAUGGGCCUAAGAACAAACCUUUUCCCUUCAUGAUAACAYCCAUAGACAACUUAUUAGAAGGGACUAGAGUUUUUGCAAAUUUCCCUGCUGGAUGGGGCCUAUAGCUAUACUUAGUAUAUGCCUAAm6ACAUGGUAAUUGGAUAGUAAAUGGUUUUCUAGUUCCAUUGCUGUAUAUUUGCCUAAAUGGm6ACUUGUGUUCAAAUUAUUUCUUCAAUUGUCAUAGAUAAUCCUGUACCAAAUGGGGAAGAAUUAGGAAAUAAUCAUGUUGUCUAAUGGUACUCUGGAUUCAGGGCAGCAACUGCCAUUUAAAUGUUGUCUUGUUCAUUUCUAAAUCUGUUCAUGAAGUUUAGGUUUUCCCUGAAACUAAGUUGAAUUAUUUCCAAAAUGAAACAGGCUUCUCAGGGACAUAUCCACUUCUUCCCAGUCUGCCUUUGGAUUAAAGCACCAAGCAGAGACCACAUUAAUUCCCUUUGCUAUACUGUGAUCCUUAGUAUGUUAAUUCUUAAGAAACCAACAUAUCACUGAAAGAAGGCUGGCAGAACGCAAGUGCAUUUUUUCACUGUGGGAAGAAAGAUCAAGUGACGUAUUAUUUUUUCCUGGUUGUCACUUAAUGGGCUGAGUAAAAAGCUUGAAAACUCA
Sequence (MODOMICS CODE ENCODING)	AUAUCUAGUUCCGGAAUGUCCCCCUUCUGGUGCCAGGCUUGCUUUUCAGUUGGGCCUGACCCACUUCUCUUCCAGGAAAGCGCCCGCCUUCCUUCUGCACCCGUCAACCUCUGGAGUGUCCUGAAAACCCUCCCUUGUGGGAGUCUCUGGGCUGCCUGUUGGUGGGACGAUUUCUCAGGAGCACGACUUCCGGCCUGAAAAGGAAGUCUCCUCCUUUUUCUCCCAAACCACUUCUUCCCCCCUACCCCCCGCCACGCGAGGCUGCGGCGCACGAUUGAAGAAUGUCCCGGAUUCCACUGGGGAAGGUCCUCCUGAGGAAUGUCAUCCGGCACACAGAUGCUCACAAUAAGAUUCAGGAGGAAUCAGAUAUGUGGAAAAUAAGAGAACUGGAAAAACAGAUGGAAGAUGCUUACCGGGGGACCAAAAGGAAAAUGCUACCCAGCAGUUCAAGCCGGAUGCGCAGUGAUGGUUUUGAUGAAGAAAGUCAAAGAUACUAUUGGAGGCCAAAGAAUGAAAUUUCUGGGACACUGGAAGAUGAUUUUCUUAAGGCUAAAUCCUGGAAUAAAAAGUUCUAUGAUUAUGAAGCAAACAUGCCAGACAGAUGGGGUCACAGUGGUUAUAAAGAGUUAUACCCUGAAGAAUUUGAAACAGACAGUGAUCAGCAAGAUAUUACCAACGGGAAGAAAACAUCUCCCCAGGUAAAGUCAUCUACCCAUGAAUCCCGCAAACACAAGAAGUCAAAGAAAUCCCACAAAAAAAAGCAGAAAAAAAGGUCACACAAAAAACAGAAGAAAAGCAAAAAGGAAGCCACAGAUAUAACAGCAGAUUCCUCGAGUGAGUUCUCAGAAGAAACUGGGGCUUCUGGUACAAGGAAAGGGAAACAACCACAUAAACGCAAGAAAAAAUCCAGGAAAAAGUCUCUCAAAAAACCUGCU2000000009UUAUUCUUAGAGGCAGAAAGUAACACUUCACAUUCAGAUGAUUCAGCAUCCAGCAGUUCUGAGGAAAGUGAGGAAAGAG2000000006ACACUAAGAAAACCAAAAGGAAAAAGAGAGAGAAAAAAGCCCAUACCUCUGUAGCCAACAAUGAAAUACAGGAGAGG2000000006ACAAACAAACGCACAAAUUGGAAAGUAGCUACAGAUGAAAGGUCUGCUGAGAGCUCAGAGGAUG2000000006ACUAAAUGGGAAACACUUUUGUUUUCCACAUG2000000006ACUGUGGAUAUUUACAGUUCUUACUCCUUGUGGUUUUGCCAGUG2000000006ACUCUUGUUCAGCACGGGGCCUGAGGUCAGAGCUGUCUUGUGCCAUCUGUAUGUUCUGACAGACGUCUUGUCUUCUAUUUUGGCGUUAAGCUUGAUCCCCUUUUCUUGUUAAAAGGGAAUCUGGUAUUUUGUUAUGAAGGUUUCUUGAAGAGAUUAUUUUUUUUUGCAAUUAAUUACGUUUAGUGUAGAGUGCAUAUACAGCAAAUUAAAGGACCCAGAAAGCUGGAUCCAAUAGUGACCUGGGUACACCAAUCGGAAUAUUGA2000000006AUUUGGGGAAGUCAAGGGCUGGGAUCAAGAGGUGGAUUGGAACUAAUGCCAUGUAGGAUGGUAUGACAAGGCAACACUGUAUUGCUCUCUGUUUAUAUAGCAGGUGUCACAACUA2000000006ACUUGUCU2000000009UUAGCCUUGGUGCUUUGAUCCUUCUAUAUUUUGACCCCACAGGUGUGGUCCGGUUUACUUAAUCAGG2000000006ACAUGGGCCUAAGAACAAACCUUUUCCCUUCAUGAUAACA2000000009UCCAUAGACAACUUAUUAGAAGGGACUAGAGUUUUUGCAAAUUUCCCUGCUGGAUGGGGCCUAUAGCUAUACUUAGUAUAUGCCUAA2000000006ACAUGGUAAUUGGAUAGUAAAUGGUUUUCUAGUUCCAUUGCUGUAUAUUUGCCUAAAUGG2000000006ACUUGUGUUCAAAUUAUUUCUUCAAUUGUCAUAGAUAAUCCUGUACCAAAUGGGGAAGAAUUAGGAAAUAAUCAUGUUGUCUAAUGGUACUCUGGAUUCAGGGCAGCAACUGCCAUUUAAAUGUUGUCUUGUUCAUUUCUAAAUCUGUUCAUGAAGUUUAGGUUUUCCCUGAAACUAAGUUGAAUUAUUUCCAAAAUGAAACAGGCUUCUCAGGGACAUAUCCACUUCUUCCCAGUCUGCCUUUGGAUUAAAGCACCAAGCAGAGACCACAUUAAUUCCCUUUGCUAUACUGUGAUCCUUAGUAUGUUAAUUCUUAAGAAACCAACAUAUCACUGAAAGAAGGCUGGCAGAACGCAAGUGCAUUUUUUCACUGUGGGAAGAAAGAUCAAGUGACGUAUUAUUUUUUCCUGGUUGUCACUUAAUGGGCUGAGUAAAAAGCUUGAAAACUCA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	936	1015	1092	1156	1188	1232	1496	1611	1619	1686	1726	1813	1873
Modification Positions	Y	m6A	m6A	m6A	m6A	m6A	m6A	m6A	Y	m6A	Y	m6A	m6A
Genomic Coordinates	11:112082748:+	11:112082827:+	11:112082904:+	11:112082968:+	11:112083000:+	11:112083044:+	11:112083308:+	11:112083423:+	11:112083431:+	11:112083498:+	11:112083538:+	11:112083625:+	11:112083685:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq Yfn77uLS5tv8	BkoLW2CBToyL BtsJQJ3DteUq Yfn77uLS5tv8	msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U BtsJQJ3DteUq Yfn77uLS5tv8	6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 93arJtwJmuS9 ArijeGVTwYBw BkoLW2CBToyL Lny8GcCeVGc9 BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	4HMi5ykupT9V 5aTkEfEpX8Xm 5Nnepx5V7yHo 6UuHp6YApVKv gBgcfFQ5WN9C jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 8cMbzB4aD5Se ArijeGVTwYBw BkoLW2CBToyL KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 PF5iqBNSbHaa UKen6WEino9G BtsJQJ3DteUq Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 8cMbzB4aD5Se 93arJtwJmuS9 ArijeGVTwYBw BkoLW2CBToyL KTLz8piFYdwC nfCHyrYzE6fB WiQcrNTGZHPT KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 PF5iqBNSbHaa UKen6WEino9G BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	4HMi5ykupT9V 5aTkEfEpX8Xm 6UuHp6YApVKv Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9	BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	NjZ8bGGJsNSR 8cMbzB4aD5Se WiQcrNTGZHPT BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP a7o5Kmjr4Tdp Yfn77uLS5tv8	4HMi5ykupT9V msuJfBpJvM5H VyCX26p5UBRL KTLz8piFYdwC WiQcrNTGZHPT BsCW7emuRX7M KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8