General Data

RNA Type	unknown
Original Source	Sci-ModoM
Transcript ID:	ENST00000533649
Gene ID:	ENSG00000179532
Gene Name:	DNHD1
Sequence (UNICHARACTER ENCODING)	CAGGCCCUGGGCCGCCAGCUGGUGAUGCUACCCUGCUCACCUCAGAUAGAGGCUCAAUGCCUGAGCAACUAUCUGAAUGGUGCCCUGCAGGGUGGUGCCUGGCUGCUGUUGGAGAAAGUUCAUCAGCUGCCCCCUGGCUUGCUCUCUGCCCUGGGCCAGCGCCUGGGUGAЖCUGCACCACUUGUAUGCCCCACUGUACCAGGAGGCUUCCCGAAACACAAGCACCAUAGACCCCACCCAGCCCCAGCUCCUUGGCAGUAGCUUCUUUGAAAAACAUCACGUGUCUGUGCGCCUUGGCUAUGGCUGUCUCCUGGUACUGCGUGCCCUGAGCUCUGCUGUGCCUGCCAACCUGCACCUGCUGCUGCGGCCUGUGGCAUUGGCAUUGCCUGAUCUGCGGCAAGUGGCAGAGCUGACUCUGCUGGGUGCAGGGAUGAGGGAUGCCUUCCAGAUGGCUACCCGCCUAUCCAAAUUCUUCUCUCUAGAGCGUGAGCUGGUGUCUGGGCCCCUGCCCUGCCGCCUGCCACUGCUCAAGCAGAUACUGGAAGACACAAUACGGЖCACUAAAUGUGACCAAGGAGGAACCGAAGUGCCAGAAGCCUCGCAGCCUAGCUGCCAUUGAGGAGGCUGCCCUACUGCGCUCACCACUGUUUAGCAUUCUCAAUGGGCUCCACCUGCACAACCUCCGAGGGCUGUUGUGUGCGCUUUUCCCUAGCGCCAGCCAAGUGCUGGCAGAACCUAUGACUUACAAGCUGAUGAAGCCAUUGGUGGUGGAGGAЖCUGCAACAGGUAGGUCUGGAUCCCAGCCCUGACAUUUUGGGGUCCUUGGAЖCAGUUGAGCCAGGCCCUGAGCCGGGCCUCAGGCAUUCUGCUCCUGGGCCCUGCGGGCAGCGGCAAGACCACUUGUUGGCACAGCUUAUUUAAGAUCCAGAAUCGGCUGGCAGCCAUGGAGGЖCACCUCAACCCAAGGCUGCCAGCCUGUGGAAAUUACCCACCUGUACCCCAGUGGCCUCAGCCCCCAGGAGUUCCUGGGAUGGCUAGAGGGCUCCUGCUGGCAUCAUGGCAUCUUUCCCAAGGUACUUCGUGCAGCCGGUCAGUGUAACAACAUGGGCCAAAAGAGGCAGACAGAGGAAUCAAUCGGGAUCCAGCACUGGAUAAUAUGUGAUGGAGCCUCCAAUGGUGCUUGGCUGGЖCUCCAUCACUUGCCUCCUGAGUGAGCUUCCCCAGCUUAGUCUCCCCAGUGGЖCAGCAGAUAGCACGACCCCCAGGCACCUUUCUCUUGAUGGAGGUGGCUGACACAACAGGCAUAUCCCCCACAGUGGUAGGCUGUUGUGCCCUAGUCUGGUGUGGUGGAGAGCAGACUUGGCAGUGUAUACUUAGUGCCCUGAUGGCAUCCCUUCCUUAUGAGUACCGCCUGCAGCACCGGЖCAGUCGCUGAGCUCAACCACAUGGCUGAGGUUCUGGUGCCUGCAACAUUGCGAUUCCUCACCUGCCAAGGUGUCAGCUCUCUGCUGCAGGUACACGGGCAGCAGGCUGUUUGUGCAGGUGUGGCAGAAGUUACCAGCAUGGCACGCAUCUUGCAUAGUCUGCUUGACCUCCACCUUCGCCUAAAGGAGGAGAAGGCCCCUGGCCCAGAGGACCUCAGCUAUAGUGAUCCUGUGGCCCAAAGCUUCAGGUCUUCAAAAAGCAGCUUUCUAAACCGGUCCCAGGUUGACAGUGACGAUGUGCCAGAUAAGUGCAGGGAACACUUGCUGGCUGUCAGCAGUUUUCUUUUUGCCUUGAUCUGGGGCUUUGGAGCCCACCUUCCCUCCAGGUACCUACCAGGAUGGGGGAUGGGAGAUGCAGAGGGCUGAGAUGGЖCUGGCCCAUGGAAGUAAAAACCCACAUGACAUCACUGUUAGGGUAUGGUGGAGUGUGUGAGUGUGUCAUAAAUGGAAGUGUUGUAACUGUCUGACGCUUUUGCCUGUGUGUCCAUCUGAGCAGGUUCUGGCCCAUCUUUGAUACCUUCAUAAGGGAUUCUAUUAGUCGCCUCUCCAACUACCCUGAGCCACCACCCUCAGCCUUGGUGUUUGAUCUACAUGUAAGCCCUGAAGAUGGAACACUGGUCCCCUUCACUGGCCAAUACCUGAGCAGCCACAUCAAAGGAACUUUGGGCACCUUUCACCCUUCUAUCCAGACUGAACGGCUCUUGUAUGUGGUGGACCUGCUUCUGUCAGGGGGACAGCCAGUGUUGCUGGCUGGAGAGGCAGCAACAGGGAAGUCAGCCUUUGUGGAGGUGCUGGUAGAGCCACAUCACCCUUACAUAUACAGCCCCAUCCACCCUGCCUUCAGUUCCUCCCACCUCCGUCUCCUGCUGAGCAGAGGAAUCCAGGGCCAAACACAAGCCAGCCCACAGCCUGGGCAUCACCAGGAUUCUAAACCCUCCCUCCUCUUCUUGCUGGAGGACCUGCACCUAGCCACUUCUGGUGAGGAGCUGCGAAGAGGGAAGGAAGGAGCUACUGUCAUCUCUUGAGACUAUAAAAUCCCUAGCAAUAUUCAUUGACUCUCAAAUAUAUGUCUGUAGAUCUAA
Sequence (SHORT NAMES ENCODING)	CAGGCCCUGGGCCGCCAGCUGGUGAUGCUACCCUGCUCACCUCAGAUAGAGGCUCAAUGCCUGAGCAACUAUCUGAAUGGUGCCCUGCAGGGUGGUGCCUGGCUGCUGUUGGAGAAAGUUCAUCAGCUGCCCCCUGGCUUGCUCUCUGCCCUGGGCCAGCGCCUGGGUGAm6ACUGCACCACUUGUAUGCCCCACUGUACCAGGAGGCUUCCCGAAACACAAGCACCAUAGACCCCACCCAGCCCCAGCUCCUUGGCAGUAGCUUCUUUGAAAAACAUCACGUGUCUGUGCGCCUUGGCUAUGGCUGUCUCCUGGUACUGCGUGCCCUGAGCUCUGCUGUGCCUGCCAACCUGCACCUGCUGCUGCGGCCUGUGGCAUUGGCAUUGCCUGAUCUGCGGCAAGUGGCAGAGCUGACUCUGCUGGGUGCAGGGAUGAGGGAUGCCUUCCAGAUGGCUACCCGCCUAUCCAAAUUCUUCUCUCUAGAGCGUGAGCUGGUGUCUGGGCCCCUGCCCUGCCGCCUGCCACUGCUCAAGCAGAUACUGGAAGACACAAUACGGm6ACACUAAAUGUGACCAAGGAGGAACCGAAGUGCCAGAAGCCUCGCAGCCUAGCUGCCAUUGAGGAGGCUGCCCUACUGCGCUCACCACUGUUUAGCAUUCUCAAUGGGCUCCACCUGCACAACCUCCGAGGGCUGUUGUGUGCGCUUUUCCCUAGCGCCAGCCAAGUGCUGGCAGAACCUAUGACUUACAAGCUGAUGAAGCCAUUGGUGGUGGAGGAm6ACUGCAACAGGUAGGUCUGGAUCCCAGCCCUGACAUUUUGGGGUCCUUGGAm6ACAGUUGAGCCAGGCCCUGAGCCGGGCCUCAGGCAUUCUGCUCCUGGGCCCUGCGGGCAGCGGCAAGACCACUUGUUGGCACAGCUUAUUUAAGAUCCAGAAUCGGCUGGCAGCCAUGGAGGm6ACACCUCAACCCAAGGCUGCCAGCCUGUGGAAAUUACCCACCUGUACCCCAGUGGCCUCAGCCCCCAGGAGUUCCUGGGAUGGCUAGAGGGCUCCUGCUGGCAUCAUGGCAUCUUUCCCAAGGUACUUCGUGCAGCCGGUCAGUGUAACAACAUGGGCCAAAAGAGGCAGACAGAGGAAUCAAUCGGGAUCCAGCACUGGAUAAUAUGUGAUGGAGCCUCCAAUGGUGCUUGGCUGGm6ACUCCAUCACUUGCCUCCUGAGUGAGCUUCCCCAGCUUAGUCUCCCCAGUGGm6ACAGCAGAUAGCACGACCCCCAGGCACCUUUCUCUUGAUGGAGGUGGCUGACACAACAGGCAUAUCCCCCACAGUGGUAGGCUGUUGUGCCCUAGUCUGGUGUGGUGGAGAGCAGACUUGGCAGUGUAUACUUAGUGCCCUGAUGGCAUCCCUUCCUUAUGAGUACCGCCUGCAGCACCGGm6ACAGUCGCUGAGCUCAACCACAUGGCUGAGGUUCUGGUGCCUGCAACAUUGCGAUUCCUCACCUGCCAAGGUGUCAGCUCUCUGCUGCAGGUACACGGGCAGCAGGCUGUUUGUGCAGGUGUGGCAGAAGUUACCAGCAUGGCACGCAUCUUGCAUAGUCUGCUUGACCUCCACCUUCGCCUAAAGGAGGAGAAGGCCCCUGGCCCAGAGGACCUCAGCUAUAGUGAUCCUGUGGCCCAAAGCUUCAGGUCUUCAAAAAGCAGCUUUCUAAACCGGUCCCAGGUUGACAGUGACGAUGUGCCAGAUAAGUGCAGGGAACACUUGCUGGCUGUCAGCAGUUUUCUUUUUGCCUUGAUCUGGGGCUUUGGAGCCCACCUUCCCUCCAGGUACCUACCAGGAUGGGGGAUGGGAGAUGCAGAGGGCUGAGAUGGm6ACUGGCCCAUGGAAGUAAAAACCCACAUGACAUCACUGUUAGGGUAUGGUGGAGUGUGUGAGUGUGUCAUAAAUGGAAGUGUUGUAACUGUCUGACGCUUUUGCCUGUGUGUCCAUCUGAGCAGGUUCUGGCCCAUCUUUGAUACCUUCAUAAGGGAUUCUAUUAGUCGCCUCUCCAACUACCCUGAGCCACCACCCUCAGCCUUGGUGUUUGAUCUACAUGUAAGCCCUGAAGAUGGAACACUGGUCCCCUUCACUGGCCAAUACCUGAGCAGCCACAUCAAAGGAACUUUGGGCACCUUUCACCCUUCUAUCCAGACUGAACGGCUCUUGUAUGUGGUGGACCUGCUUCUGUCAGGGGGACAGCCAGUGUUGCUGGCUGGAGAGGCAGCAACAGGGAAGUCAGCCUUUGUGGAGGUGCUGGUAGAGCCACAUCACCCUUACAUAUACAGCCCCAUCCACCCUGCCUUCAGUUCCUCCCACCUCCGUCUCCUGCUGAGCAGAGGAAUCCAGGGCCAAACACAAGCCAGCCCACAGCCUGGGCAUCACCAGGAUUCUAAACCCUCCCUCCUCUUCUUGCUGGAGGACCUGCACCUAGCCACUUCUGGUGAGGAGCUGCGAAGAGGGAAGGAAGGAGCUACUGUCAUCUCUUGAGACUAUAAAAUCCCUAGCAAUAUUCAUUGACUCUCAAAUAUAUGUCUGUAGAUCUAA
Sequence (MODOMICS CODE ENCODING)	CAGGCCCUGGGCCGCCAGCUGGUGAUGCUACCCUGCUCACCUCAGAUAGAGGCUCAAUGCCUGAGCAACUAUCUGAAUGGUGCCCUGCAGGGUGGUGCCUGGCUGCUGUUGGAGAAAGUUCAUCAGCUGCCCCCUGGCUUGCUCUCUGCCCUGGGCCAGCGCCUGGGUGA2000000006ACUGCACCACUUGUAUGCCCCACUGUACCAGGAGGCUUCCCGAAACACAAGCACCAUAGACCCCACCCAGCCCCAGCUCCUUGGCAGUAGCUUCUUUGAAAAACAUCACGUGUCUGUGCGCCUUGGCUAUGGCUGUCUCCUGGUACUGCGUGCCCUGAGCUCUGCUGUGCCUGCCAACCUGCACCUGCUGCUGCGGCCUGUGGCAUUGGCAUUGCCUGAUCUGCGGCAAGUGGCAGAGCUGACUCUGCUGGGUGCAGGGAUGAGGGAUGCCUUCCAGAUGGCUACCCGCCUAUCCAAAUUCUUCUCUCUAGAGCGUGAGCUGGUGUCUGGGCCCCUGCCCUGCCGCCUGCCACUGCUCAAGCAGAUACUGGAAGACACAAUACGG2000000006ACACUAAAUGUGACCAAGGAGGAACCGAAGUGCCAGAAGCCUCGCAGCCUAGCUGCCAUUGAGGAGGCUGCCCUACUGCGCUCACCACUGUUUAGCAUUCUCAAUGGGCUCCACCUGCACAACCUCCGAGGGCUGUUGUGUGCGCUUUUCCCUAGCGCCAGCCAAGUGCUGGCAGAACCUAUGACUUACAAGCUGAUGAAGCCAUUGGUGGUGGAGGA2000000006ACUGCAACAGGUAGGUCUGGAUCCCAGCCCUGACAUUUUGGGGUCCUUGGA2000000006ACAGUUGAGCCAGGCCCUGAGCCGGGCCUCAGGCAUUCUGCUCCUGGGCCCUGCGGGCAGCGGCAAGACCACUUGUUGGCACAGCUUAUUUAAGAUCCAGAAUCGGCUGGCAGCCAUGGAGG2000000006ACACCUCAACCCAAGGCUGCCAGCCUGUGGAAAUUACCCACCUGUACCCCAGUGGCCUCAGCCCCCAGGAGUUCCUGGGAUGGCUAGAGGGCUCCUGCUGGCAUCAUGGCAUCUUUCCCAAGGUACUUCGUGCAGCCGGUCAGUGUAACAACAUGGGCCAAAAGAGGCAGACAGAGGAAUCAAUCGGGAUCCAGCACUGGAUAAUAUGUGAUGGAGCCUCCAAUGGUGCUUGGCUGG2000000006ACUCCAUCACUUGCCUCCUGAGUGAGCUUCCCCAGCUUAGUCUCCCCAGUGG2000000006ACAGCAGAUAGCACGACCCCCAGGCACCUUUCUCUUGAUGGAGGUGGCUGACACAACAGGCAUAUCCCCCACAGUGGUAGGCUGUUGUGCCCUAGUCUGGUGUGGUGGAGAGCAGACUUGGCAGUGUAUACUUAGUGCCCUGAUGGCAUCCCUUCCUUAUGAGUACCGCCUGCAGCACCGG2000000006ACAGUCGCUGAGCUCAACCACAUGGCUGAGGUUCUGGUGCCUGCAACAUUGCGAUUCCUCACCUGCCAAGGUGUCAGCUCUCUGCUGCAGGUACACGGGCAGCAGGCUGUUUGUGCAGGUGUGGCAGAAGUUACCAGCAUGGCACGCAUCUUGCAUAGUCUGCUUGACCUCCACCUUCGCCUAAAGGAGGAGAAGGCCCCUGGCCCAGAGGACCUCAGCUAUAGUGAUCCUGUGGCCCAAAGCUUCAGGUCUUCAAAAAGCAGCUUUCUAAACCGGUCCCAGGUUGACAGUGACGAUGUGCCAGAUAAGUGCAGGGAACACUUGCUGGCUGUCAGCAGUUUUCUUUUUGCCUUGAUCUGGGGCUUUGGAGCCCACCUUCCCUCCAGGUACCUACCAGGAUGGGGGAUGGGAGAUGCAGAGGGCUGAGAUGG2000000006ACUGGCCCAUGGAAGUAAAAACCCACAUGACAUCACUGUUAGGGUAUGGUGGAGUGUGUGAGUGUGUCAUAAAUGGAAGUGUUGUAACUGUCUGACGCUUUUGCCUGUGUGUCCAUCUGAGCAGGUUCUGGCCCAUCUUUGAUACCUUCAUAAGGGAUUCUAUUAGUCGCCUCUCCAACUACCCUGAGCCACCACCCUCAGCCUUGGUGUUUGAUCUACAUGUAAGCCCUGAAGAUGGAACACUGGUCCCCUUCACUGGCCAAUACCUGAGCAGCCACAUCAAAGGAACUUUGGGCACCUUUCACCCUUCUAUCCAGACUGAACGGCUCUUGUAUGUGGUGGACCUGCUUCUGUCAGGGGGACAGCCAGUGUUGCUGGCUGGAGAGGCAGCAACAGGGAAGUCAGCCUUUGUGGAGGUGCUGGUAGAGCCACAUCACCCUUACAUAUACAGCCCCAUCCACCCUGCCUUCAGUUCCUCCCACCUCCGUCUCCUGCUGAGCAGAGGAAUCCAGGGCCAAACACAAGCCAGCCCACAGCCUGGGCAUCACCAGGAUUCUAAACCCUCCCUCCUCUUCUUGCUGGAGGACCUGCACCUAGCCACUUCUGGUGAGGAGCUGCGAAGAGGGAAGGAAGGAGCUACUGUCAUCUCUUGAGACUAUAAAAUCCCUAGCAAUAUUCAUUGACUCUCAAAUAUAUGUCUGUAGAUCUAA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	171	556	774	825	947	1184	1236	1417	1848
Modification Positions	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A
Genomic Coordinates	11:6546213:+	11:6546598:+	11:6546816:+	11:6546867:+	11:6546989:+	11:6547226:+	11:6547278:+	11:6547459:+	11:6548086:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn	6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn	6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn	6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn	6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn	6UuHp6YApVKv gBgcfFQ5WN9C jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn	6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn	6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn	6UuHp6YApVKv jNkxUQNx8GRd