General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000278568
Gene ID:	ENSG00000149269
Gene Name:	PAK1
Sequence (UNICHARACTER ENCODING)	CCUCCCGCGGCUGCAGCCGGAGCCGAAGGUGGUGGCUGCACAGUAGACGCCCCCUCACGGCUUCCCCCACACGCUCCCGCCCCCUCGCUCGCCCAUCGCGCUUCCCUCACAGGCUCUGCAGUCCUCCCCCACAGACGCCUUCCCCCUUGGACUCUCAUUCCCUUUUCCACGGAGCCCCGCGCUUUCGUGAGCCCCCUCGAGGAACCUGGUCUCCGCAUCCAGUUACCACCUCCUGCCUCAGAGGCCAUCUGAGCCCUUCGCACCUCGCCCCUCAGUCCCCCCUUCCCCCCCCGCCCGCGUCGCCUCGCUCCCUCCCGCCCCCCCAUCAUCCCUUCCCUCGCAGUUCCCCUGUCCUGAGGGGAGCCCCGCCACGGGCAGCGCGGCGGCGGCGGCAGGAGGGAGAAAGUGAAGCGGUAGCUCGCGCACACUCGCGCCCUCACUCCCGGCUAGGCGGCACCCACCGCCGGGAGGAGGAGGAGGAGCCGAGAGGAGCUGAGCGAGCGCGGAAGUAGCUGCUGCUGGUGGUGACAAUGUCAAAUAACGGCCUAGACAUUCAAGACAAACCCCCAGCCCCUCCGAUGAGAAAUACCAGCACUAUGAUUGGAGCCGGCAGCAAAGAUGCUGGAACCCUAAACCAUGGUUCUAAACCUCUGCCUCCAAACCCAGAGGAGAAGAAAAAGAAGGACCGAUUUUACCGAUCCAUUUUACCUGGAGAUAAAACAAAUAAAAAGAAAGAGAAAGAGCGGCCAGAGAUUUCUCUCCCUUCAGAUUUUGAACACACAAUUCAUGUCGGUUUUGAUGCUGUCACAGGGGAGUUUACGGGAAUGCCAGAGCAGUGGGCCCGCUUGCUUCAGACAUCAAAUAUCACUAAGUCGGAGCAGAAGAAAAACCCGCAGGCUGUUCUGGAUGUGUUGGAGUUUUACAACUCGAAGAAGACAPCCAACAGCCAGAAAUACAUGAGCUUUACAGAUAAGUCAGCUGAGGAUUACAAUUCUUCUAAUGCCUUGAAUGUGAAGGCUGUGUCUGAGACUCCUGCAGUGCCACCAGUUUCAGAAGAUGAGGAUGAUGAUGAUGAUGAUGCUACCCCACCACCAGUGAUUGCUCCACGCCCAGAGCACACAAAAUCUGUAUACACACGGUCUGUGAUUGAЖCCACUUCCUGUCACUCCAACUCGGGACGUGGCUACAUCUCCCAUUUCACCUACUGAAAAUAACACCACUCCACCAGAUGCUUUGACCCGGAAUACUGAGAAGCAGAAGAAGAAGCCUAAAAUGUCUGAUGAGGAGAUCUUGGAGAAAUUACGAAGCAUAGUGAGUGUGGGCGAUCCUAAGAAGAAAUAUACACGGUUUGAGAAGAUUGGACAAGGUGCUUCAGGCACCGUGUACACAGCAAUGGAUGUGGCCACAGGACAGGAGGUGGCCAUUAAGCAGAUGAAUCUUCAGCAGCAGCCCAAGAAAGAGCUGAUUAUUAAUGAGAUCCUGGUCAUGAGGGAAAACAAGAACCCAAACAUUGUGAAUUACUUGGACAGUUACCUCGUGGGAGAUGAGCUGUGGGUUGUUAUGGAAUACUUGGCUGGAGGCUCCUUGACAGAUGUGGUGACAGAAACUUGCAUGGAUGAAGGCCAAAUUGCAGCUGUGUGCCGUGAGUGUCUGCAGGCUCUGGAGUUCUUGCAUUCGAACCAGGUCAUUCACAGAGACAUCAAGAGUGACAAUAUUCUGUUGGGAAUGGAUGGCUCUGUCAAGCUAACUGACUUUGGAUUCUGUGCACAGAUAACCCCAGAGCAGAGCAAACGGAGCACCAUGGUAGGAACCCCAUACUGGAUGGCACCAGAGGUUGUGACACGAAAGGCCUAUGGGCCCAAGGUUGACAUCUGGUCCCUGGGCAUCAUGGCCAUCGAAAUGAUUGAAGGGGAGCCUCCAUACCUCAAUGAAAACCCUCUGAGAGCCUUGUACCUCAUUGCCACCAAUGGGACCCCAGAACUUCAGAACCCAGAGAAGCUGUCAGCUAUCUUCCGGGACUUUCUGAACCGCUGUCUCGAGAUGGAUGUGGAGAAGAGAGGUUCAGCUAAAGAGCUGCUACAGGUGAGAAAACUGAGGUUUCAAGUGUUUAGUAACUUUUCCAUGAUAGCUGCAUCAAUUCCUGAAGAUUGCCAAGCCCCUCUCCAGCCUCACUCCACUGAUUGCUGCAGCUAAGGAGGCAACAAAGAЖCAAUCACUAAAACCACACUCACCCCAGCCUCAUUGUGCCAAGCCUUCUGUGAGAUAAAUGCACAUUUCAGAAAUUCCAACUCCUGAUGCCCUCUUCUCCUUGCCUUGCUUCUCCCAUUUCCUGAUCUAGCACUCCUCAAGЖCUUUGAUCCUUGGAAACCGUGUGUCCAGCAUUGAAGAGAЖCUGCAACUGAAUGACUAAUCAGAUGAUGGCCAUUUCUAAAUAAGGAAUUUCCPCCCAAUUCAUGGAUAUGAGGGUGGUUUAUGAUUAAGGGUUUAUAUAAAUAAAUGUUUCUAGUCUUCCGUGUGUCAAAAUCCUCACCPCCUUCAUAACCAUCU
Sequence (SHORT NAMES ENCODING)	CCUCCCGCGGCUGCAGCCGGAGCCGAAGGUGGUGGCUGCACAGUAGACGCCCCCUCACGGCUUCCCCCACACGCUCCCGCCCCCUCGCUCGCCCAUCGCGCUUCCCUCACAGGCUCUGCAGUCCUCCCCCACAGACGCCUUCCCCCUUGGACUCUCAUUCCCUUUUCCACGGAGCCCCGCGCUUUCGUGAGCCCCCUCGAGGAACCUGGUCUCCGCAUCCAGUUACCACCUCCUGCCUCAGAGGCCAUCUGAGCCCUUCGCACCUCGCCCCUCAGUCCCCCCUUCCCCCCCCGCCCGCGUCGCCUCGCUCCCUCCCGCCCCCCCAUCAUCCCUUCCCUCGCAGUUCCCCUGUCCUGAGGGGAGCCCCGCCACGGGCAGCGCGGCGGCGGCGGCAGGAGGGAGAAAGUGAAGCGGUAGCUCGCGCACACUCGCGCCCUCACUCCCGGCUAGGCGGCACCCACCGCCGGGAGGAGGAGGAGGAGCCGAGAGGAGCUGAGCGAGCGCGGAAGUAGCUGCUGCUGGUGGUGACAAUGUCAAAUAACGGCCUAGACAUUCAAGACAAACCCCCAGCCCCUCCGAUGAGAAAUACCAGCACUAUGAUUGGAGCCGGCAGCAAAGAUGCUGGAACCCUAAACCAUGGUUCUAAACCUCUGCCUCCAAACCCAGAGGAGAAGAAAAAGAAGGACCGAUUUUACCGAUCCAUUUUACCUGGAGAUAAAACAAAUAAAAAGAAAGAGAAAGAGCGGCCAGAGAUUUCUCUCCCUUCAGAUUUUGAACACACAAUUCAUGUCGGUUUUGAUGCUGUCACAGGGGAGUUUACGGGAAUGCCAGAGCAGUGGGCCCGCUUGCUUCAGACAUCAAAUAUCACUAAGUCGGAGCAGAAGAAAAACCCGCAGGCUGUUCUGGAUGUGUUGGAGUUUUACAACUCGAAGAAGACAYCCAACAGCCAGAAAUACAUGAGCUUUACAGAUAAGUCAGCUGAGGAUUACAAUUCUUCUAAUGCCUUGAAUGUGAAGGCUGUGUCUGAGACUCCUGCAGUGCCACCAGUUUCAGAAGAUGAGGAUGAUGAUGAUGAUGAUGCUACCCCACCACCAGUGAUUGCUCCACGCCCAGAGCACACAAAAUCUGUAUACACACGGUCUGUGAUUGAm6ACCACUUCCUGUCACUCCAACUCGGGACGUGGCUACAUCUCCCAUUUCACCUACUGAAAAUAACACCACUCCACCAGAUGCUUUGACCCGGAAUACUGAGAAGCAGAAGAAGAAGCCUAAAAUGUCUGAUGAGGAGAUCUUGGAGAAAUUACGAAGCAUAGUGAGUGUGGGCGAUCCUAAGAAGAAAUAUACACGGUUUGAGAAGAUUGGACAAGGUGCUUCAGGCACCGUGUACACAGCAAUGGAUGUGGCCACAGGACAGGAGGUGGCCAUUAAGCAGAUGAAUCUUCAGCAGCAGCCCAAGAAAGAGCUGAUUAUUAAUGAGAUCCUGGUCAUGAGGGAAAACAAGAACCCAAACAUUGUGAAUUACUUGGACAGUUACCUCGUGGGAGAUGAGCUGUGGGUUGUUAUGGAAUACUUGGCUGGAGGCUCCUUGACAGAUGUGGUGACAGAAACUUGCAUGGAUGAAGGCCAAAUUGCAGCUGUGUGCCGUGAGUGUCUGCAGGCUCUGGAGUUCUUGCAUUCGAACCAGGUCAUUCACAGAGACAUCAAGAGUGACAAUAUUCUGUUGGGAAUGGAUGGCUCUGUCAAGCUAACUGACUUUGGAUUCUGUGCACAGAUAACCCCAGAGCAGAGCAAACGGAGCACCAUGGUAGGAACCCCAUACUGGAUGGCACCAGAGGUUGUGACACGAAAGGCCUAUGGGCCCAAGGUUGACAUCUGGUCCCUGGGCAUCAUGGCCAUCGAAAUGAUUGAAGGGGAGCCUCCAUACCUCAAUGAAAACCCUCUGAGAGCCUUGUACCUCAUUGCCACCAAUGGGACCCCAGAACUUCAGAACCCAGAGAAGCUGUCAGCUAUCUUCCGGGACUUUCUGAACCGCUGUCUCGAGAUGGAUGUGGAGAAGAGAGGUUCAGCUAAAGAGCUGCUACAGGUGAGAAAACUGAGGUUUCAAGUGUUUAGUAACUUUUCCAUGAUAGCUGCAUCAAUUCCUGAAGAUUGCCAAGCCCCUCUCCAGCCUCACUCCACUGAUUGCUGCAGCUAAGGAGGCAACAAAGAm6ACAAUCACUAAAACCACACUCACCCCAGCCUCAUUGUGCCAAGCCUUCUGUGAGAUAAAUGCACAUUUCAGAAAUUCCAACUCCUGAUGCCCUCUUCUCCUUGCCUUGCUUCUCCCAUUUCCUGAUCUAGCACUCCUCAAGm6ACUUUGAUCCUUGGAAACCGUGUGUCCAGCAUUGAAGAGAm6ACUGCAACUGAAUGACUAAUCAGAUGAUGGCCAUUUCUAAAUAAGGAAUUUCCYCCCAAUUCAUGGAUAUGAGGGUGGUUUAUGAUUAAGGGUUUAUAUAAAUAAAUGUUUCUAGUCUUCCGUGUGUCAAAAUCCUCACCYCCUUCAUAACCAUCU
Sequence (MODOMICS CODE ENCODING)	CCUCCCGCGGCUGCAGCCGGAGCCGAAGGUGGUGGCUGCACAGUAGACGCCCCCUCACGGCUUCCCCCACACGCUCCCGCCCCCUCGCUCGCCCAUCGCGCUUCCCUCACAGGCUCUGCAGUCCUCCCCCACAGACGCCUUCCCCCUUGGACUCUCAUUCCCUUUUCCACGGAGCCCCGCGCUUUCGUGAGCCCCCUCGAGGAACCUGGUCUCCGCAUCCAGUUACCACCUCCUGCCUCAGAGGCCAUCUGAGCCCUUCGCACCUCGCCCCUCAGUCCCCCCUUCCCCCCCCGCCCGCGUCGCCUCGCUCCCUCCCGCCCCCCCAUCAUCCCUUCCCUCGCAGUUCCCCUGUCCUGAGGGGAGCCCCGCCACGGGCAGCGCGGCGGCGGCGGCAGGAGGGAGAAAGUGAAGCGGUAGCUCGCGCACACUCGCGCCCUCACUCCCGGCUAGGCGGCACCCACCGCCGGGAGGAGGAGGAGGAGCCGAGAGGAGCUGAGCGAGCGCGGAAGUAGCUGCUGCUGGUGGUGACAAUGUCAAAUAACGGCCUAGACAUUCAAGACAAACCCCCAGCCCCUCCGAUGAGAAAUACCAGCACUAUGAUUGGAGCCGGCAGCAAAGAUGCUGGAACCCUAAACCAUGGUUCUAAACCUCUGCCUCCAAACCCAGAGGAGAAGAAAAAGAAGGACCGAUUUUACCGAUCCAUUUUACCUGGAGAUAAAACAAAUAAAAAGAAAGAGAAAGAGCGGCCAGAGAUUUCUCUCCCUUCAGAUUUUGAACACACAAUUCAUGUCGGUUUUGAUGCUGUCACAGGGGAGUUUACGGGAAUGCCAGAGCAGUGGGCCCGCUUGCUUCAGACAUCAAAUAUCACUAAGUCGGAGCAGAAGAAAAACCCGCAGGCUGUUCUGGAUGUGUUGGAGUUUUACAACUCGAAGAAGACA2000000009UCCAACAGCCAGAAAUACAUGAGCUUUACAGAUAAGUCAGCUGAGGAUUACAAUUCUUCUAAUGCCUUGAAUGUGAAGGCUGUGUCUGAGACUCCUGCAGUGCCACCAGUUUCAGAAGAUGAGGAUGAUGAUGAUGAUGAUGCUACCCCACCACCAGUGAUUGCUCCACGCCCAGAGCACACAAAAUCUGUAUACACACGGUCUGUGAUUGA2000000006ACCACUUCCUGUCACUCCAACUCGGGACGUGGCUACAUCUCCCAUUUCACCUACUGAAAAUAACACCACUCCACCAGAUGCUUUGACCCGGAAUACUGAGAAGCAGAAGAAGAAGCCUAAAAUGUCUGAUGAGGAGAUCUUGGAGAAAUUACGAAGCAUAGUGAGUGUGGGCGAUCCUAAGAAGAAAUAUACACGGUUUGAGAAGAUUGGACAAGGUGCUUCAGGCACCGUGUACACAGCAAUGGAUGUGGCCACAGGACAGGAGGUGGCCAUUAAGCAGAUGAAUCUUCAGCAGCAGCCCAAGAAAGAGCUGAUUAUUAAUGAGAUCCUGGUCAUGAGGGAAAACAAGAACCCAAACAUUGUGAAUUACUUGGACAGUUACCUCGUGGGAGAUGAGCUGUGGGUUGUUAUGGAAUACUUGGCUGGAGGCUCCUUGACAGAUGUGGUGACAGAAACUUGCAUGGAUGAAGGCCAAAUUGCAGCUGUGUGCCGUGAGUGUCUGCAGGCUCUGGAGUUCUUGCAUUCGAACCAGGUCAUUCACAGAGACAUCAAGAGUGACAAUAUUCUGUUGGGAAUGGAUGGCUCUGUCAAGCUAACUGACUUUGGAUUCUGUGCACAGAUAACCCCAGAGCAGAGCAAACGGAGCACCAUGGUAGGAACCCCAUACUGGAUGGCACCAGAGGUUGUGACACGAAAGGCCUAUGGGCCCAAGGUUGACAUCUGGUCCCUGGGCAUCAUGGCCAUCGAAAUGAUUGAAGGGGAGCCUCCAUACCUCAAUGAAAACCCUCUGAGAGCCUUGUACCUCAUUGCCACCAAUGGGACCCCAGAACUUCAGAACCCAGAGAAGCUGUCAGCUAUCUUCCGGGACUUUCUGAACCGCUGUCUCGAGAUGGAUGUGGAGAAGAGAGGUUCAGCUAAAGAGCUGCUACAGGUGAGAAAACUGAGGUUUCAAGUGUUUAGUAACUUUUCCAUGAUAGCUGCAUCAAUUCCUGAAGAUUGCCAAGCCCCUCUCCAGCCUCACUCCACUGAUUGCUGCAGCUAAGGAGGCAACAAAGA2000000006ACAAUCACUAAAACCACACUCACCCCAGCCUCAUUGUGCCAAGCCUUCUGUGAGAUAAAUGCACAUUUCAGAAAUUCCAACUCCUGAUGCCCUCUUCUCCUUGCCUUGCUUCUCCCAUUUCCUGAUCUAGCACUCCUCAAG2000000006ACUUUGAUCCUUGGAAACCGUGUGUCCAGCAUUGAAGAGA2000000006ACUGCAACUGAAUGACUAAUCAGAUGAUGGCCAUUUCUAAAUAAGGAAUUUCC2000000009UCCCAAUUCAUGGAUAUGAGGGUGGUUUAUGAUUAAGGGUUUAUAUAAAUAAAUGUUUCUAGUCUUCCGUGUGUCAAAAUCCUCACC2000000009UCCUUCAUAACCAUCU

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	939	1151	2207	2348	2388	2441	2528
Modification Positions	Y	m6A	m6A	m6A	m6A	Y	Y
Genomic Coordinates	11:77379271:-	11:77355819:-	11:77323284:-	11:77323143:-	11:77323103:-	11:77323050:-	11:77322963:-
Level of Experimental Evidence	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP eGNFqdoGxzRm iezFbUdmY3A6 Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 8cMbzB4aD5Se KENzb7mwdBd9 Lny8GcCeVGc9 BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP eGNFqdoGxzRm iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn KjeH7Nsffuas Lny8GcCeVGc9 UKen6WEino9G BtsJQJ3DteUq dknfVe6BK8aP eGNFqdoGxzRm oZ9Kp5NX8Hv5 iezFbUdmY3A6 JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP eGNFqdoGxzRm XWZVGdLC6gGJ iezFbUdmY3A6 JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP eGNFqdoGxzRm Yfn77uLS5tv8