General Data

RNA Type	lncRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000658243
Gene ID:	ENSG00000251381
Gene Name:	LINC00958
Sequence (UNICHARACTER ENCODING)	CUCUCUCUCUCUCCUGCUGCAUUGUGAAGAAACUGCUUGCUUCCCUCUCACCCUCUGCAGUUUCCUGAGGCCUCCCCAGCCAUGCGGAACGGGAGAAAGUUUAAGCUCUCCUCACUAUGAGUUUUCAAGUAUAAAAGЖCUUUUUCUUCCACGAUUUUGAGAACAACUGAGGЖCUCUUGUGACCAGGACAACAGGGAAGCUUGCAGCAAGAUAGCUCCAGGUUGGAUUCAUGCUUCGCACCCCAAGGGCUGCCAGCCAGAGAGGAGGAGAAGCAAUCACUCCUGCAGUUUCUGAЖCACUACACAGACGCCAGGUAGCUUCUUCAGGAGAACAGCCCUCUGAGGAGGCAGGAAGAGGAGGCUUAUCUUUCAGCAGCCGGAGCUGCUGAGAUCUCUGGGCAGAUUAAGCUCUCUCUAAUGGAUGGGCUCCAGCCUGGCACAUUCAGUGGAGAGGGAUCCACUCAUCCAUCAUCAACAUAAUAUGGUCCUCCCUGCACUUCACAGUGUCCUCUUGCUAUUGAAAAGGCUUUUUUGCCUUCUCAAGUUUCUUUGUCAACAGUCUACAGGAAGAAGCUCAGGCCGCCACCGGCAGAGAACCUUCCACUGGCCACUCAGCGAAAGGCAGCUGAUUCAGCACCUGGAGAAGACCGGCAACAGGGCUGAGUUUCCUUGCACUGCAGAGGAGGGGAGAGGCAAGGAGUGGЖCAUGAGCACGGAGGAUCCAGGGCACUCCCUUGAUGGUGAUGCCCUCGAAGGGCUGCCCCGUGCCCAUUGUACAGAAUGUGGAUUCCACCCCACGCCAUGAGAGCUCUCGCGCAGGCCCAGACCACUUUAUAAGCCAUAUUUCCCACCAAUUCCUGUUUCUGGAUCUGUCAGGUUAUUUCAUAUUUCUAGGCCCUUAGCUUUGCUUCCUCUUCCCUGAACGCCCUUUGCCCACAUCAUCCCAGCUCUCCUUCUCCUCCUGCCUUCUGUCUUCUCUUCCUCUCAUUUCUUGUCACCCAGGCUGGAGUCCAGUGGCGUGAUCACGGCUCACUACAGCCUUGAACUCCCGGGCUCAGGUGAUCCUCCCACCUGAGCCUCCCGAGUAGCUGGGACUACAGAUGCACACCACCAUGCCAGCUAAUUUUUAAAACUGUUUUUAGGGAUGGGGUCAUCUUCCUGUGUUGCCCAGGCUUGUCUCAAACUCCUGGGCUCAAGUGAUCCUCUCACCUCAGCCUUCCAAAGUGCUGGGAUUACAGGCAUGAGCCACAACAUCCAGCCCCUUUUCUCUUUUCUUACCCUUCUUUCCUAUUUUCUUUUCCAUUUUCUUUCCCUCCCUUCUUCUUUCUUUCCUAACUAUUAAGGAGUAGAUUGAAUUCAAGGUCUUUAUGUGUGUCAGUUUUUGUUUUCCAACAAAUAUUUCUUAAAAACCAACCAUUGAAACGUAAUGGUAACCACUGGCCCCUGUCUCCACCUCCACACCUAAGAAGCCCCAAAUCCAGAUGUGUCCAUUAAAAUCAGUCCAGAUCUUCUUUACCAAGCCACUAGAUGUCAUAUUAAUUUCACAGCAGAAUAGGGAAGCCCAUGCCGGAGCUGAAAACCUGCAACAACAAAAAAGCAUCUAAAUACUGCAAAAAAAAAAAAAAAAAAGAGGGAGAGAGGCAUCUUAAUAUUUGUCCUUAACACAUCAUACCAGЖCUUCUGCUUCCAGGAAUGACUGGAUGUGGUUUUUCUAGGUGGЖCAUAAUACAAAAUGCAGCUACCUGAAAACAAUGGAAAGUGGACAGAGCAGGCAGAUUCUGGUGGGAAGUCCACGCAAUAAAGAAAAGAUGUUACAGGAA
Sequence (SHORT NAMES ENCODING)	CUCUCUCUCUCUCCUGCUGCAUUGUGAAGAAACUGCUUGCUUCCCUCUCACCCUCUGCAGUUUCCUGAGGCCUCCCCAGCCAUGCGGAACGGGAGAAAGUUUAAGCUCUCCUCACUAUGAGUUUUCAAGUAUAAAAGm6ACUUUUUCUUCCACGAUUUUGAGAACAACUGAGGm6ACUCUUGUGACCAGGACAACAGGGAAGCUUGCAGCAAGAUAGCUCCAGGUUGGAUUCAUGCUUCGCACCCCAAGGGCUGCCAGCCAGAGAGGAGGAGAAGCAAUCACUCCUGCAGUUUCUGAm6ACACUACACAGACGCCAGGUAGCUUCUUCAGGAGAACAGCCCUCUGAGGAGGCAGGAAGAGGAGGCUUAUCUUUCAGCAGCCGGAGCUGCUGAGAUCUCUGGGCAGAUUAAGCUCUCUCUAAUGGAUGGGCUCCAGCCUGGCACAUUCAGUGGAGAGGGAUCCACUCAUCCAUCAUCAACAUAAUAUGGUCCUCCCUGCACUUCACAGUGUCCUCUUGCUAUUGAAAAGGCUUUUUUGCCUUCUCAAGUUUCUUUGUCAACAGUCUACAGGAAGAAGCUCAGGCCGCCACCGGCAGAGAACCUUCCACUGGCCACUCAGCGAAAGGCAGCUGAUUCAGCACCUGGAGAAGACCGGCAACAGGGCUGAGUUUCCUUGCACUGCAGAGGAGGGGAGAGGCAAGGAGUGGm6ACAUGAGCACGGAGGAUCCAGGGCACUCCCUUGAUGGUGAUGCCCUCGAAGGGCUGCCCCGUGCCCAUUGUACAGAAUGUGGAUUCCACCCCACGCCAUGAGAGCUCUCGCGCAGGCCCAGACCACUUUAUAAGCCAUAUUUCCCACCAAUUCCUGUUUCUGGAUCUGUCAGGUUAUUUCAUAUUUCUAGGCCCUUAGCUUUGCUUCCUCUUCCCUGAACGCCCUUUGCCCACAUCAUCCCAGCUCUCCUUCUCCUCCUGCCUUCUGUCUUCUCUUCCUCUCAUUUCUUGUCACCCAGGCUGGAGUCCAGUGGCGUGAUCACGGCUCACUACAGCCUUGAACUCCCGGGCUCAGGUGAUCCUCCCACCUGAGCCUCCCGAGUAGCUGGGACUACAGAUGCACACCACCAUGCCAGCUAAUUUUUAAAACUGUUUUUAGGGAUGGGGUCAUCUUCCUGUGUUGCCCAGGCUUGUCUCAAACUCCUGGGCUCAAGUGAUCCUCUCACCUCAGCCUUCCAAAGUGCUGGGAUUACAGGCAUGAGCCACAACAUCCAGCCCCUUUUCUCUUUUCUUACCCUUCUUUCCUAUUUUCUUUUCCAUUUUCUUUCCCUCCCUUCUUCUUUCUUUCCUAACUAUUAAGGAGUAGAUUGAAUUCAAGGUCUUUAUGUGUGUCAGUUUUUGUUUUCCAACAAAUAUUUCUUAAAAACCAACCAUUGAAACGUAAUGGUAACCACUGGCCCCUGUCUCCACCUCCACACCUAAGAAGCCCCAAAUCCAGAUGUGUCCAUUAAAAUCAGUCCAGAUCUUCUUUACCAAGCCACUAGAUGUCAUAUUAAUUUCACAGCAGAAUAGGGAAGCCCAUGCCGGAGCUGAAAACCUGCAACAACAAAAAAGCAUCUAAAUACUGCAAAAAAAAAAAAAAAAAAGAGGGAGAGAGGCAUCUUAAUAUUUGUCCUUAACACAUCAUACCAGm6ACUUCUGCUUCCAGGAAUGACUGGAUGUGGUUUUUCUAGGUGGm6ACAUAAUACAAAAUGCAGCUACCUGAAAACAAUGGAAAGUGGACAGAGCAGGCAGAUUCUGGUGGGAAGUCCACGCAAUAAAGAAAAGAUGUUACAGGAA
Sequence (MODOMICS CODE ENCODING)	CUCUCUCUCUCUCCUGCUGCAUUGUGAAGAAACUGCUUGCUUCCCUCUCACCCUCUGCAGUUUCCUGAGGCCUCCCCAGCCAUGCGGAACGGGAGAAAGUUUAAGCUCUCCUCACUAUGAGUUUUCAAGUAUAAAAG2000000006ACUUUUUCUUCCACGAUUUUGAGAACAACUGAGG2000000006ACUCUUGUGACCAGGACAACAGGGAAGCUUGCAGCAAGAUAGCUCCAGGUUGGAUUCAUGCUUCGCACCCCAAGGGCUGCCAGCCAGAGAGGAGGAGAAGCAAUCACUCCUGCAGUUUCUGA2000000006ACACUACACAGACGCCAGGUAGCUUCUUCAGGAGAACAGCCCUCUGAGGAGGCAGGAAGAGGAGGCUUAUCUUUCAGCAGCCGGAGCUGCUGAGAUCUCUGGGCAGAUUAAGCUCUCUCUAAUGGAUGGGCUCCAGCCUGGCACAUUCAGUGGAGAGGGAUCCACUCAUCCAUCAUCAACAUAAUAUGGUCCUCCCUGCACUUCACAGUGUCCUCUUGCUAUUGAAAAGGCUUUUUUGCCUUCUCAAGUUUCUUUGUCAACAGUCUACAGGAAGAAGCUCAGGCCGCCACCGGCAGAGAACCUUCCACUGGCCACUCAGCGAAAGGCAGCUGAUUCAGCACCUGGAGAAGACCGGCAACAGGGCUGAGUUUCCUUGCACUGCAGAGGAGGGGAGAGGCAAGGAGUGG2000000006ACAUGAGCACGGAGGAUCCAGGGCACUCCCUUGAUGGUGAUGCCCUCGAAGGGCUGCCCCGUGCCCAUUGUACAGAAUGUGGAUUCCACCCCACGCCAUGAGAGCUCUCGCGCAGGCCCAGACCACUUUAUAAGCCAUAUUUCCCACCAAUUCCUGUUUCUGGAUCUGUCAGGUUAUUUCAUAUUUCUAGGCCCUUAGCUUUGCUUCCUCUUCCCUGAACGCCCUUUGCCCACAUCAUCCCAGCUCUCCUUCUCCUCCUGCCUUCUGUCUUCUCUUCCUCUCAUUUCUUGUCACCCAGGCUGGAGUCCAGUGGCGUGAUCACGGCUCACUACAGCCUUGAACUCCCGGGCUCAGGUGAUCCUCCCACCUGAGCCUCCCGAGUAGCUGGGACUACAGAUGCACACCACCAUGCCAGCUAAUUUUUAAAACUGUUUUUAGGGAUGGGGUCAUCUUCCUGUGUUGCCCAGGCUUGUCUCAAACUCCUGGGCUCAAGUGAUCCUCUCACCUCAGCCUUCCAAAGUGCUGGGAUUACAGGCAUGAGCCACAACAUCCAGCCCCUUUUCUCUUUUCUUACCCUUCUUUCCUAUUUUCUUUUCCAUUUUCUUUCCCUCCCUUCUUCUUUCUUUCCUAACUAUUAAGGAGUAGAUUGAAUUCAAGGUCUUUAUGUGUGUCAGUUUUUGUUUUCCAACAAAUAUUUCUUAAAAACCAACCAUUGAAACGUAAUGGUAACCACUGGCCCCUGUCUCCACCUCCACACCUAAGAAGCCCCAAAUCCAGAUGUGUCCAUUAAAAUCAGUCCAGAUCUUCUUUACCAAGCCACUAGAUGUCAUAUUAAUUUCACAGCAGAAUAGGGAAGCCCAUGCCGGAGCUGAAAACCUGCAACAACAAAAAAGCAUCUAAAUACUGCAAAAAAAAAAAAAAAAAAGAGGGAGAGAGGCAUCUUAAUAUUUGUCCUUAACACAUCAUACCAG2000000006ACUUCUGCUUCCAGGAAUGACUGGAUGUGGUUUUUCUAGGUGG2000000006ACAUAAUACAAAAUGCAGCUACCUGAAAACAAUGGAAAGUGGACAGAGCAGGCAGAUUCUGGUGGGAAGUCCACGCAAUAAAGAAAAGAUGUUACAGGAA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	138	172	294	701	1672	1715
Modification Positions	m6A	m6A	m6A	m6A	m6A	m6A
Genomic Coordinates	11:12980863:-	11:12980829:-	11:12980707:-	11:12962654:-	11:12961683:-	11:12961640:-
Level of Experimental Evidence	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	Lny8GcCeVGc9 UKen6WEino9G	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB WdHxkJGRmFxn Lny8GcCeVGc9	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB WdHxkJGRmFxn aJksAshEgQ8U	6UuHp6YApVKv gZuvgwMuBfgh jNkxUQNx8GRd VL7zkHvkfkoB WdHxkJGRmFxn	3TeAZFYFxgvp 6UuHp6YApVKv jNkxUQNx8GRd NjZ8bGGJsNSR Q36pf44ZRvxu UN3tNpbCPHYf VL7zkHvkfkoB WdHxkJGRmFxn	6UuHp6YApVKv jNkxUQNx8GRd UN3tNpbCPHYf VL7zkHvkfkoB WdHxkJGRmFxn Lny8GcCeVGc9