General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000686001
Gene ID:	ENSG00000177030
Gene Name:	DEAF1
Sequence (UNICHARACTER ENCODING)	GACUCGGACUCGGCGGCAAAGCAGCUGGGCCUGGCUGAGGCGGCGGCGGUGGCGGCCGCGGCCGCUGUGGCGGCGGCGGCCGCGGCCGCGGCAGGAGGCGAGGCGGAGGAGCCGGUGCUGAGCAGGGACGAGGACUCGGAGGAGGACGCAGACUCGGAGGCGGAGCGGGAGACGCCGCGGGUCACGGCAGUGGCGGUGAUGGCGGCGGAGCCCGGGCACAUGGACAUGGGCGCCGAGGCCCUGCCCGGCCCCGACGAGGCCGCCGCUGCCGCAGCCUUCGCAGAGGUGACCACAGUGACAGUGGCCAACGUGGGGGCUGCUGCAGACAAUGUCUUCACCACGUCUGUGGCGAACGCGGCAPCCAUCUCAGGACAUGUUCUGUCUGGUAGGACGGCCCUUCAGAUCGGGGACAGCCUGAACACCGAAAAAGCGACACUGAUUGUCGUCCACACAGAUGGGAGCAUCGUGGAGACCACCGGGCUGAAAGGCCCGGCAGCUCCCCUCACCCCAGGUCCUCAGUCUCCUCCAACCCCUCUGGCUCCCGGCCAAGAAAAAGGUGGAACUAAAUACAACUGGGACCCUUCUGUGUACGACAGUGAGCUGCCCGUACGGUGCCGGAACAUCAGCGGCACUCUGUACAAGAACAGGCUCGGCUCAGGCGGCCGGGGACGGUGCAUCAAGCAGGGGGAGAACUGGUACAGUCCCACCGAGUUUGAGGCCAUGGCAGGAAGAGCCAGCAGUAAGGACUGGAAAAGAAGCAUUCGCUACGCGGGCCGACCCUUGCAGUGCCUCAPCCAGGAUGGGAUCUUAAACCCUCACGCUGCCUCUUGCACCUGUGCUGCCUGCUGCGACGACAUGACCUUAAGUGGCCCAGUCAGGCUUUUUGUGCCUUACAAAAGGCGCAAGAAGGAGAAUGAACUGCCCACAACUCCCGUGAAGAAGGACUCCCCCAAGAACAUCACAUUGCUUCCAGCCACCGCGGCUACCACCUUCACCGUGACCCCCUCGGGACAGAUCACGACCUCGGGGGCACUGACCUUUGACCGAGCGUCCACGGUAGAGGCCACUGCUGUCAUAUCAGAGAGUCCGGCCCAGGGCGACGUCUUCGCAGGGGCCACAGUCCAAGAGGCCAGCGUGCAGCCCCCAUGCAGGGCCAGCCACCCUGAGCCUCACUACCCCGGCUAUCAGGACAGCUGCCAGAUCGCACCGUUUCCAGAAGCUGCGUUGCCAACGUCACAPCCCAAAAUAGUGUUGACAPCCCUGCCUGCGCUGGCGGUCCCACCCCCGACUCCCACCAAAGCGGCACCUCCCGCGUUGGUCAAUGGGCUGGAGCUGUCAGAGCCGCGGAGCUGGCUGUACCUAGAAGAGAUGGUCAACUCCUUGCUCAACACAGCGCAGCAGCUGAAGACGCUGUUUGAGCAAGCCAAGCAUGCCAGCACCUACCGAGAAGCUGCCACAAACCAGGCCAAGAUCCACGCUGACGCAGAGCGGAAGGAGCAGUCCUGCGUUAACUGCGGCCGGGAGGCUAUGAGCGAGUGCACCGGCUGCCACAAGGUCAACUACUGCUCCACCUUCUGCCAACGCAAGACAAUCUCACUCUGUCGCCAGGCUGGAGUGCAAUGGCACGAUCUCAGCCCACUGCAACCUCAACGUCCCGGGUUCAAGUGAUUUCCCUUCCUCAGCCUCCUGAGUAGCUGGGAUUAUAGGACUGGAAGGAUCACCAGCACAUAUGCGGCCAGUCAGCAGCUGUCACCGUCCAGGCAGACGAAGUCCACGUGGCUGAAAGCGUGAUGGAGAAGGUGACCGUGUGAGGCUCCAUCGGCCGCCCUGGGAGCUGGGGCCCCUCGCACUCCUGUGAGGCUUUUGCAGGUCGAAGGCCCCCCUGAGGЖCUCUGGGGGGACGUUGAGAAGAGGGGUGUGGGAAGGUAAAGAAACUUGCUGGЖCAAGUCAUUAЖCACACUPUAAGCGAAUGGUGCCCUGGGAAGCGCACUCCCCCUGCCCGGGCCCCCUGCCCGCUCGCGGЖCAGAUUUUUUAUCCCUGGGAUCAUGAGCGUCCGGUCUUGCCCACA
Sequence (SHORT NAMES ENCODING)	GACUCGGACUCGGCGGCAAAGCAGCUGGGCCUGGCUGAGGCGGCGGCGGUGGCGGCCGCGGCCGCUGUGGCGGCGGCGGCCGCGGCCGCGGCAGGAGGCGAGGCGGAGGAGCCGGUGCUGAGCAGGGACGAGGACUCGGAGGAGGACGCAGACUCGGAGGCGGAGCGGGAGACGCCGCGGGUCACGGCAGUGGCGGUGAUGGCGGCGGAGCCCGGGCACAUGGACAUGGGCGCCGAGGCCCUGCCCGGCCCCGACGAGGCCGCCGCUGCCGCAGCCUUCGCAGAGGUGACCACAGUGACAGUGGCCAACGUGGGGGCUGCUGCAGACAAUGUCUUCACCACGUCUGUGGCGAACGCGGCAYCCAUCUCAGGACAUGUUCUGUCUGGUAGGACGGCCCUUCAGAUCGGGGACAGCCUGAACACCGAAAAAGCGACACUGAUUGUCGUCCACACAGAUGGGAGCAUCGUGGAGACCACCGGGCUGAAAGGCCCGGCAGCUCCCCUCACCCCAGGUCCUCAGUCUCCUCCAACCCCUCUGGCUCCCGGCCAAGAAAAAGGUGGAACUAAAUACAACUGGGACCCUUCUGUGUACGACAGUGAGCUGCCCGUACGGUGCCGGAACAUCAGCGGCACUCUGUACAAGAACAGGCUCGGCUCAGGCGGCCGGGGACGGUGCAUCAAGCAGGGGGAGAACUGGUACAGUCCCACCGAGUUUGAGGCCAUGGCAGGAAGAGCCAGCAGUAAGGACUGGAAAAGAAGCAUUCGCUACGCGGGCCGACCCUUGCAGUGCCUCAYCCAGGAUGGGAUCUUAAACCCUCACGCUGCCUCUUGCACCUGUGCUGCCUGCUGCGACGACAUGACCUUAAGUGGCCCAGUCAGGCUUUUUGUGCCUUACAAAAGGCGCAAGAAGGAGAAUGAACUGCCCACAACUCCCGUGAAGAAGGACUCCCCCAAGAACAUCACAUUGCUUCCAGCCACCGCGGCUACCACCUUCACCGUGACCCCCUCGGGACAGAUCACGACCUCGGGGGCACUGACCUUUGACCGAGCGUCCACGGUAGAGGCCACUGCUGUCAUAUCAGAGAGUCCGGCCCAGGGCGACGUCUUCGCAGGGGCCACAGUCCAAGAGGCCAGCGUGCAGCCCCCAUGCAGGGCCAGCCACCCUGAGCCUCACUACCCCGGCUAUCAGGACAGCUGCCAGAUCGCACCGUUUCCAGAAGCUGCGUUGCCAACGUCACAYCCCAAAAUAGUGUUGACAYCCCUGCCUGCGCUGGCGGUCCCACCCCCGACUCCCACCAAAGCGGCACCUCCCGCGUUGGUCAAUGGGCUGGAGCUGUCAGAGCCGCGGAGCUGGCUGUACCUAGAAGAGAUGGUCAACUCCUUGCUCAACACAGCGCAGCAGCUGAAGACGCUGUUUGAGCAAGCCAAGCAUGCCAGCACCUACCGAGAAGCUGCCACAAACCAGGCCAAGAUCCACGCUGACGCAGAGCGGAAGGAGCAGUCCUGCGUUAACUGCGGCCGGGAGGCUAUGAGCGAGUGCACCGGCUGCCACAAGGUCAACUACUGCUCCACCUUCUGCCAACGCAAGACAAUCUCACUCUGUCGCCAGGCUGGAGUGCAAUGGCACGAUCUCAGCCCACUGCAACCUCAACGUCCCGGGUUCAAGUGAUUUCCCUUCCUCAGCCUCCUGAGUAGCUGGGAUUAUAGGACUGGAAGGAUCACCAGCACAUAUGCGGCCAGUCAGCAGCUGUCACCGUCCAGGCAGACGAAGUCCACGUGGCUGAAAGCGUGAUGGAGAAGGUGACCGUGUGAGGCUCCAUCGGCCGCCCUGGGAGCUGGGGCCCCUCGCACUCCUGUGAGGCUUUUGCAGGUCGAAGGCCCCCCUGAGGm6ACUCUGGGGGGACGUUGAGAAGAGGGGUGUGGGAAGGUAAAGAAACUUGCUGGm6ACAAGUCAUUAm6ACACACUYUAAGCGAAUGGUGCCCUGGGAAGCGCACUCCCCCUGCCCGGGCCCCCUGCCCGCUCGCGGm6ACAGAUUUUUUAUCCCUGGGAUCAUGAGCGUCCGGUCUUGCCCACA
Sequence (MODOMICS CODE ENCODING)	GACUCGGACUCGGCGGCAAAGCAGCUGGGCCUGGCUGAGGCGGCGGCGGUGGCGGCCGCGGCCGCUGUGGCGGCGGCGGCCGCGGCCGCGGCAGGAGGCGAGGCGGAGGAGCCGGUGCUGAGCAGGGACGAGGACUCGGAGGAGGACGCAGACUCGGAGGCGGAGCGGGAGACGCCGCGGGUCACGGCAGUGGCGGUGAUGGCGGCGGAGCCCGGGCACAUGGACAUGGGCGCCGAGGCCCUGCCCGGCCCCGACGAGGCCGCCGCUGCCGCAGCCUUCGCAGAGGUGACCACAGUGACAGUGGCCAACGUGGGGGCUGCUGCAGACAAUGUCUUCACCACGUCUGUGGCGAACGCGGCA2000000009UCCAUCUCAGGACAUGUUCUGUCUGGUAGGACGGCCCUUCAGAUCGGGGACAGCCUGAACACCGAAAAAGCGACACUGAUUGUCGUCCACACAGAUGGGAGCAUCGUGGAGACCACCGGGCUGAAAGGCCCGGCAGCUCCCCUCACCCCAGGUCCUCAGUCUCCUCCAACCCCUCUGGCUCCCGGCCAAGAAAAAGGUGGAACUAAAUACAACUGGGACCCUUCUGUGUACGACAGUGAGCUGCCCGUACGGUGCCGGAACAUCAGCGGCACUCUGUACAAGAACAGGCUCGGCUCAGGCGGCCGGGGACGGUGCAUCAAGCAGGGGGAGAACUGGUACAGUCCCACCGAGUUUGAGGCCAUGGCAGGAAGAGCCAGCAGUAAGGACUGGAAAAGAAGCAUUCGCUACGCGGGCCGACCCUUGCAGUGCCUCA2000000009UCCAGGAUGGGAUCUUAAACCCUCACGCUGCCUCUUGCACCUGUGCUGCCUGCUGCGACGACAUGACCUUAAGUGGCCCAGUCAGGCUUUUUGUGCCUUACAAAAGGCGCAAGAAGGAGAAUGAACUGCCCACAACUCCCGUGAAGAAGGACUCCCCCAAGAACAUCACAUUGCUUCCAGCCACCGCGGCUACCACCUUCACCGUGACCCCCUCGGGACAGAUCACGACCUCGGGGGCACUGACCUUUGACCGAGCGUCCACGGUAGAGGCCACUGCUGUCAUAUCAGAGAGUCCGGCCCAGGGCGACGUCUUCGCAGGGGCCACAGUCCAAGAGGCCAGCGUGCAGCCCCCAUGCAGGGCCAGCCACCCUGAGCCUCACUACCCCGGCUAUCAGGACAGCUGCCAGAUCGCACCGUUUCCAGAAGCUGCGUUGCCAACGUCACA2000000009UCCCAAAAUAGUGUUGACA2000000009UCCCUGCCUGCGCUGGCGGUCCCACCCCCGACUCCCACCAAAGCGGCACCUCCCGCGUUGGUCAAUGGGCUGGAGCUGUCAGAGCCGCGGAGCUGGCUGUACCUAGAAGAGAUGGUCAACUCCUUGCUCAACACAGCGCAGCAGCUGAAGACGCUGUUUGAGCAAGCCAAGCAUGCCAGCACCUACCGAGAAGCUGCCACAAACCAGGCCAAGAUCCACGCUGACGCAGAGCGGAAGGAGCAGUCCUGCGUUAACUGCGGCCGGGAGGCUAUGAGCGAGUGCACCGGCUGCCACAAGGUCAACUACUGCUCCACCUUCUGCCAACGCAAGACAAUCUCACUCUGUCGCCAGGCUGGAGUGCAAUGGCACGAUCUCAGCCCACUGCAACCUCAACGUCCCGGGUUCAAGUGAUUUCCCUUCCUCAGCCUCCUGAGUAGCUGGGAUUAUAGGACUGGAAGGAUCACCAGCACAUAUGCGGCCAGUCAGCAGCUGUCACCGUCCAGGCAGACGAAGUCCACGUGGCUGAAAGCGUGAUGGAGAAGGUGACCGUGUGAGGCUCCAUCGGCCGCCCUGGGAGCUGGGGCCCCUCGCACUCCUGUGAGGCUUUUGCAGGUCGAAGGCCCCCCUGAGG2000000006ACUCUGGGGGGACGUUGAGAAGAGGGGUGUGGGAAGGUAAAGAAACUUGCUGG2000000006ACAAGUCAUUA2000000006ACACACU2000000009UUAAGCGAAUGGUGCCCUGGGAAGCGCACUCCCCCUGCCCGGGCCCCCUGCCCGCUCGCGG2000000006ACAGAUUUUUUAUCCCUGGGAUCAUGAGCGUCCGGUCUUGCCCACA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	361	794	1239	1258	1889	1942	1953	1960	2021
Modification Positions	Y	Y	Y	Y	m6A	m6A	m6A	Y	m6A
Genomic Coordinates	11:691521:-	11:686862:-	11:678704:-	11:674775:-	11:644472:-	11:644419:-	11:644408:-	11:644401:-	11:644340:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U D6ncpa2PPWj3 93arJtwJmuS9 BkoLW2CBToyL Lny8GcCeVGc9 BtsJQJ3DteUq dknfVe6BK8aP oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BtsJQJ3DteUq bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP f6YSioLdAWpr kx7BHU7ZycYE oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP kx7BHU7ZycYE oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP kx7BHU7ZycYE oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn ArijeGVTwYBw Lny8GcCeVGc9 834aFpha8RvT dA7YoLwHrzgR JASnTTw2HeNE ksEP666umrV9 NKGM8wdLLrnu ZuM5xpZmNuDL BtsJQJ3DteUq bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP f6YSioLdAWpr kx7BHU7ZycYE Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8