General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000643516
Gene ID:	ENSG00000166340
Gene Name:	TPP1
Sequence (UNICHARACTER ENCODING)	GGGCCGUGCGGACCCUGAGGAAGAGCUGAGUCUCACCUUUGCCCUGAGACAGCAGAAUGUGGAAAGACUCUCGGAGCUGGUGCAGGCUGUGUCGGAUCCCAGCUCUCCUCAAUACGGAAAAUACCUGACCCUAGAGAAUGUGGCUGAUCUGGUGAGGCCAUCCCCACUGACCCUCCACACGGUGCAAAAAUGGCUCUUGGCAGCCGGAGCCCAGAAGUGCCAUUCUGUGAUCACACAGGACUUUCUGACUUGCUGGCUGAGCAUCCGACAAGCAGAGCUGCUGCUCCCUGGGGCUGAGUUUCAUCACUAUGUGGGAGGACCUACGGAAACCCAUGUUGUAAGGUCCCCACAPCCCUACCAGCUUCCACAGGCCUUGGCCCCCCAUGUGGACUUUGGCCGGCAUGAGGGACAGGAGCCCUUCCUGCAGUGGCUCAUGCUGCUCAGUAAUGAGUCAGCCCUGCCACAUGUGCAUACUGUGAGCUAUGGAGAUGAUGAGGACUCCCUCAGCAGCGCCUACAUCCAGCGGGUCAACACUGAGCUCAUGAAGGCUGCCGCUCGGGGUCUCACCCUGCUCUUCGCCUCAGGUGACAGUGGGGCCGGGUGUUGGUCUGUCUCUGGAAGACACCAGUUCCGCCCUACCUUCCCUGCCUCCAGCCCCUAUGUCACCACAGUGGGAGGCACAUCCUUCCAGGAACCUUUCCUCAUCACAAAUGAAAUUGUUGACUAUAUCAGUGGUGGUGGCUUCAGCAAUGUGUUCCCACGGCCUUCAUACCAGGAGGAAGCUGUAACGAAGUUCCUGAGCUCUAGCCCCCACCUGCCACCAUCCAGUUACUUCAAUGCCAGUGGCCGUGCCUACCCAGAUGUGGCUGCACUUUCUGAUGGCUACUGGGUGGUCAGCAACAGAGUGCCCAUUCCAUGGGUGUCCGGAACCUCGGCCUCUACUCCAGUGUUUGGGGGGAUCCUAUCCUUGAUCAAUGAGCACAGGAUCCUUAGUGGCCGCCCCCCUCUUGGCUUUCUCAACCCAAGGCUCUACCAGCAGCAUGGGGCAGGACUCUUUGAUGUAACCCGUGGCUGCCAUGAGUCCUGUCUGGAUGAAGAGGUAGAGGGCCAGGGUUUCUGCUCUGGUCCUGGCUGGGAUCCUGUAACAGGCUGGGGAACACCCAACUUCCCAGCUUUGCUGAAGACUCUACUCAACCCCUGACCCUUUCCUAUCAGGAGAGAUGGCUUGUCCCCUGCCCUGAAGCUGGCAGUUCAGUCCCUUAUUCUGCCCUGUUGGAAGCCCUGCUGAACCCUCAACUAUUGACUGCUGCAGЖCAGCUUAUCUCCCUAACCCUGAAAUGCUGUGAGCUUGACUUGACUCCCAACCCUACCAUGCUCCAUCAUACUCAGGUCUCCCUACUCCUGCCUUAGAUUCCUCAAUAAGAUGCUGUAACUAGCAUUUUUUGAAUGCCUCUCCCUCCGCAUCUCAUCUUUCUCUUUUCAAUCAGGCUUUUCCAAAGGGUUGUAUACAGACUCUGUGCACUAUUUCACUUGAUAUUCAUUCCCCAAUUCACUGCAAGGAGACCUCUACUGUCACCGUUUACUCUUUCCUACCCUGACAPCCAGAAACAAUGGCCUCCAGUGCAUACUUCUCAAUCUUUGCUPUAUGGCCUUUCCAUCAUAGUUGCCCACUCCCUCUCCUUACUUAGCUUCCAGGUCUUAЖCUUCUCUGACUACUCUUGUCUUCCUCUCUCAUCAAUUUCUGCUUCUUCAUGGAAUGCUGACCUUCAUUGCUCCAUUUGUAGAUUUUUGCUCUUCUCAGUUUACUCAUUGUCCCCUGGAACAAAUCACUGACAUCUACAACCAUUACCAUCUCACUAAAUAAGЖCUUUCUAUCCAAUAAUGAUUGAUACCUCAAAUGUAAGAUGCGUGAUACUCAACAUUUCAUCGUCCACCUUCCCAACCCCAAACAAUUCCAUCUCGUUUCUUCUUGGUAAAUGAUGCUAUGCUUUUUCCAACCAAGCCAGAAACCUGUGUCAUCUUUUCACCCCACCUUCAAUCAACAAGUCCUCAAUCAACAAGUCCUACUGACUGCACAUCUUAAAUAUAUCUPUAUCAGUCCACAAGUCCUUCCAAUUAUAUUUCCCAAGUAUAUCUAGAACUUAUCCACUUAUAUCCCCACUGCUACUACCUUAGUUUAGGGCUAUAUUCUCUUGAAAAAAAGUGUCCUUACUUCCUGCCAAUCCCCAAGUCAUCUUCCAGAGUAAAAUGCAAAUCCCAUCAGGCCACUUGGAUGAAAACCCUUCAAGGAUUACUGGAUAGAAUUCAGGCUUUCCCCUCCAGCCCCCAAUCAUAGCUCACAAACCUUCCUUGCUAUUUGUUCUUAAGUAAAAAAUCAUUUUUCCUCCUCCCUCCCCAAACCCCAAGGAACUCUCACUCUUGCUCAAGCUGUUCCGUCCCCUUACCACCCCUGAUACAACUGCCAGGUUAAUUUCCAGAAUUCUUGCAAGACUCAGUPCAGAAGUCACCUUCUUUCGUGAAUGUUUUGAUUCCCUGAGGCUACUPUAUUUUGGUAUGGCUGAAAAAUCCUAGAUUUUCUAAACAAAACCUGUUUGAAUCUUGGUUCUGAUAUGGACUAGGAGAGAGACUGGGUCAAGUAAGCUUAUCUCCCUGAGGCUGUUUCCUCGUCUGUUAAGUGUGAAUAUCAAUACCUGCCUUUCAUAAUCACCAGGGAAUAAAGUGGAAUAAUGUUGAUAACAGUGCUUGGCACCUGGAAGUAGGUGGCAGAUGUUAACGCCCUUCCPCCCUUGCACUGCGCCCCCUGUGCCUACCUCUAGCAUUGUAACGACCACGUAGUAUUGAAAUGGCCAGUUUACUUGUCUGCCUUCCUUUCCAAGACCGUUGGUGCCUAGAGGACUAGAAUCGUGUCCUAUUUAЖCU
Sequence (SHORT NAMES ENCODING)	GGGCCGUGCGGACCCUGAGGAAGAGCUGAGUCUCACCUUUGCCCUGAGACAGCAGAAUGUGGAAAGACUCUCGGAGCUGGUGCAGGCUGUGUCGGAUCCCAGCUCUCCUCAAUACGGAAAAUACCUGACCCUAGAGAAUGUGGCUGAUCUGGUGAGGCCAUCCCCACUGACCCUCCACACGGUGCAAAAAUGGCUCUUGGCAGCCGGAGCCCAGAAGUGCCAUUCUGUGAUCACACAGGACUUUCUGACUUGCUGGCUGAGCAUCCGACAAGCAGAGCUGCUGCUCCCUGGGGCUGAGUUUCAUCACUAUGUGGGAGGACCUACGGAAACCCAUGUUGUAAGGUCCCCACAYCCCUACCAGCUUCCACAGGCCUUGGCCCCCCAUGUGGACUUUGGCCGGCAUGAGGGACAGGAGCCCUUCCUGCAGUGGCUCAUGCUGCUCAGUAAUGAGUCAGCCCUGCCACAUGUGCAUACUGUGAGCUAUGGAGAUGAUGAGGACUCCCUCAGCAGCGCCUACAUCCAGCGGGUCAACACUGAGCUCAUGAAGGCUGCCGCUCGGGGUCUCACCCUGCUCUUCGCCUCAGGUGACAGUGGGGCCGGGUGUUGGUCUGUCUCUGGAAGACACCAGUUCCGCCCUACCUUCCCUGCCUCCAGCCCCUAUGUCACCACAGUGGGAGGCACAUCCUUCCAGGAACCUUUCCUCAUCACAAAUGAAAUUGUUGACUAUAUCAGUGGUGGUGGCUUCAGCAAUGUGUUCCCACGGCCUUCAUACCAGGAGGAAGCUGUAACGAAGUUCCUGAGCUCUAGCCCCCACCUGCCACCAUCCAGUUACUUCAAUGCCAGUGGCCGUGCCUACCCAGAUGUGGCUGCACUUUCUGAUGGCUACUGGGUGGUCAGCAACAGAGUGCCCAUUCCAUGGGUGUCCGGAACCUCGGCCUCUACUCCAGUGUUUGGGGGGAUCCUAUCCUUGAUCAAUGAGCACAGGAUCCUUAGUGGCCGCCCCCCUCUUGGCUUUCUCAACCCAAGGCUCUACCAGCAGCAUGGGGCAGGACUCUUUGAUGUAACCCGUGGCUGCCAUGAGUCCUGUCUGGAUGAAGAGGUAGAGGGCCAGGGUUUCUGCUCUGGUCCUGGCUGGGAUCCUGUAACAGGCUGGGGAACACCCAACUUCCCAGCUUUGCUGAAGACUCUACUCAACCCCUGACCCUUUCCUAUCAGGAGAGAUGGCUUGUCCCCUGCCCUGAAGCUGGCAGUUCAGUCCCUUAUUCUGCCCUGUUGGAAGCCCUGCUGAACCCUCAACUAUUGACUGCUGCAGm6ACAGCUUAUCUCCCUAACCCUGAAAUGCUGUGAGCUUGACUUGACUCCCAACCCUACCAUGCUCCAUCAUACUCAGGUCUCCCUACUCCUGCCUUAGAUUCCUCAAUAAGAUGCUGUAACUAGCAUUUUUUGAAUGCCUCUCCCUCCGCAUCUCAUCUUUCUCUUUUCAAUCAGGCUUUUCCAAAGGGUUGUAUACAGACUCUGUGCACUAUUUCACUUGAUAUUCAUUCCCCAAUUCACUGCAAGGAGACCUCUACUGUCACCGUUUACUCUUUCCUACCCUGACAYCCAGAAACAAUGGCCUCCAGUGCAUACUUCUCAAUCUUUGCUYUAUGGCCUUUCCAUCAUAGUUGCCCACUCCCUCUCCUUACUUAGCUUCCAGGUCUUAm6ACUUCUCUGACUACUCUUGUCUUCCUCUCUCAUCAAUUUCUGCUUCUUCAUGGAAUGCUGACCUUCAUUGCUCCAUUUGUAGAUUUUUGCUCUUCUCAGUUUACUCAUUGUCCCCUGGAACAAAUCACUGACAUCUACAACCAUUACCAUCUCACUAAAUAAGm6ACUUUCUAUCCAAUAAUGAUUGAUACCUCAAAUGUAAGAUGCGUGAUACUCAACAUUUCAUCGUCCACCUUCCCAACCCCAAACAAUUCCAUCUCGUUUCUUCUUGGUAAAUGAUGCUAUGCUUUUUCCAACCAAGCCAGAAACCUGUGUCAUCUUUUCACCCCACCUUCAAUCAACAAGUCCUCAAUCAACAAGUCCUACUGACUGCACAUCUUAAAUAUAUCUYUAUCAGUCCACAAGUCCUUCCAAUUAUAUUUCCCAAGUAUAUCUAGAACUUAUCCACUUAUAUCCCCACUGCUACUACCUUAGUUUAGGGCUAUAUUCUCUUGAAAAAAAGUGUCCUUACUUCCUGCCAAUCCCCAAGUCAUCUUCCAGAGUAAAAUGCAAAUCCCAUCAGGCCACUUGGAUGAAAACCCUUCAAGGAUUACUGGAUAGAAUUCAGGCUUUCCCCUCCAGCCCCCAAUCAUAGCUCACAAACCUUCCUUGCUAUUUGUUCUUAAGUAAAAAAUCAUUUUUCCUCCUCCCUCCCCAAACCCCAAGGAACUCUCACUCUUGCUCAAGCUGUUCCGUCCCCUUACCACCCCUGAUACAACUGCCAGGUUAAUUUCCAGAAUUCUUGCAAGACUCAGUYCAGAAGUCACCUUCUUUCGUGAAUGUUUUGAUUCCCUGAGGCUACUYUAUUUUGGUAUGGCUGAAAAAUCCUAGAUUUUCUAAACAAAACCUGUUUGAAUCUUGGUUCUGAUAUGGACUAGGAGAGAGACUGGGUCAAGUAAGCUUAUCUCCCUGAGGCUGUUUCCUCGUCUGUUAAGUGUGAAUAUCAAUACCUGCCUUUCAUAAUCACCAGGGAAUAAAGUGGAAUAAUGUUGAUAACAGUGCUUGGCACCUGGAAGUAGGUGGCAGAUGUUAACGCCCUUCCYCCCUUGCACUGCGCCCCCUGUGCCUACCUCUAGCAUUGUAACGACCACGUAGUAUUGAAAUGGCCAGUUUACUUGUCUGCCUUCCUUUCCAAGACCGUUGGUGCCUAGAGGACUAGAAUCGUGUCCUAUUUAm6ACU
Sequence (MODOMICS CODE ENCODING)	GGGCCGUGCGGACCCUGAGGAAGAGCUGAGUCUCACCUUUGCCCUGAGACAGCAGAAUGUGGAAAGACUCUCGGAGCUGGUGCAGGCUGUGUCGGAUCCCAGCUCUCCUCAAUACGGAAAAUACCUGACCCUAGAGAAUGUGGCUGAUCUGGUGAGGCCAUCCCCACUGACCCUCCACACGGUGCAAAAAUGGCUCUUGGCAGCCGGAGCCCAGAAGUGCCAUUCUGUGAUCACACAGGACUUUCUGACUUGCUGGCUGAGCAUCCGACAAGCAGAGCUGCUGCUCCCUGGGGCUGAGUUUCAUCACUAUGUGGGAGGACCUACGGAAACCCAUGUUGUAAGGUCCCCACA2000000009UCCCUACCAGCUUCCACAGGCCUUGGCCCCCCAUGUGGACUUUGGCCGGCAUGAGGGACAGGAGCCCUUCCUGCAGUGGCUCAUGCUGCUCAGUAAUGAGUCAGCCCUGCCACAUGUGCAUACUGUGAGCUAUGGAGAUGAUGAGGACUCCCUCAGCAGCGCCUACAUCCAGCGGGUCAACACUGAGCUCAUGAAGGCUGCCGCUCGGGGUCUCACCCUGCUCUUCGCCUCAGGUGACAGUGGGGCCGGGUGUUGGUCUGUCUCUGGAAGACACCAGUUCCGCCCUACCUUCCCUGCCUCCAGCCCCUAUGUCACCACAGUGGGAGGCACAUCCUUCCAGGAACCUUUCCUCAUCACAAAUGAAAUUGUUGACUAUAUCAGUGGUGGUGGCUUCAGCAAUGUGUUCCCACGGCCUUCAUACCAGGAGGAAGCUGUAACGAAGUUCCUGAGCUCUAGCCCCCACCUGCCACCAUCCAGUUACUUCAAUGCCAGUGGCCGUGCCUACCCAGAUGUGGCUGCACUUUCUGAUGGCUACUGGGUGGUCAGCAACAGAGUGCCCAUUCCAUGGGUGUCCGGAACCUCGGCCUCUACUCCAGUGUUUGGGGGGAUCCUAUCCUUGAUCAAUGAGCACAGGAUCCUUAGUGGCCGCCCCCCUCUUGGCUUUCUCAACCCAAGGCUCUACCAGCAGCAUGGGGCAGGACUCUUUGAUGUAACCCGUGGCUGCCAUGAGUCCUGUCUGGAUGAAGAGGUAGAGGGCCAGGGUUUCUGCUCUGGUCCUGGCUGGGAUCCUGUAACAGGCUGGGGAACACCCAACUUCCCAGCUUUGCUGAAGACUCUACUCAACCCCUGACCCUUUCCUAUCAGGAGAGAUGGCUUGUCCCCUGCCCUGAAGCUGGCAGUUCAGUCCCUUAUUCUGCCCUGUUGGAAGCCCUGCUGAACCCUCAACUAUUGACUGCUGCAG2000000006ACAGCUUAUCUCCCUAACCCUGAAAUGCUGUGAGCUUGACUUGACUCCCAACCCUACCAUGCUCCAUCAUACUCAGGUCUCCCUACUCCUGCCUUAGAUUCCUCAAUAAGAUGCUGUAACUAGCAUUUUUUGAAUGCCUCUCCCUCCGCAUCUCAUCUUUCUCUUUUCAAUCAGGCUUUUCCAAAGGGUUGUAUACAGACUCUGUGCACUAUUUCACUUGAUAUUCAUUCCCCAAUUCACUGCAAGGAGACCUCUACUGUCACCGUUUACUCUUUCCUACCCUGACA2000000009UCCAGAAACAAUGGCCUCCAGUGCAUACUUCUCAAUCUUUGCU2000000009UUAUGGCCUUUCCAUCAUAGUUGCCCACUCCCUCUCCUUACUUAGCUUCCAGGUCUUA2000000006ACUUCUCUGACUACUCUUGUCUUCCUCUCUCAUCAAUUUCUGCUUCUUCAUGGAAUGCUGACCUUCAUUGCUCCAUUUGUAGAUUUUUGCUCUUCUCAGUUUACUCAUUGUCCCCUGGAACAAAUCACUGACAUCUACAACCAUUACCAUCUCACUAAAUAAG2000000006ACUUUCUAUCCAAUAAUGAUUGAUACCUCAAAUGUAAGAUGCGUGAUACUCAACAUUUCAUCGUCCACCUUCCCAACCCCAAACAAUUCCAUCUCGUUUCUUCUUGGUAAAUGAUGCUAUGCUUUUUCCAACCAAGCCAGAAACCUGUGUCAUCUUUUCACCCCACCUUCAAUCAACAAGUCCUCAAUCAACAAGUCCUACUGACUGCACAUCUUAAAUAUAUCU2000000009UUAUCAGUCCACAAGUCCUUCCAAUUAUAUUUCCCAAGUAUAUCUAGAACUUAUCCACUUAUAUCCCCACUGCUACUACCUUAGUUUAGGGCUAUAUUCUCUUGAAAAAAAGUGUCCUUACUUCCUGCCAAUCCCCAAGUCAUCUUCCAGAGUAAAAUGCAAAUCCCAUCAGGCCACUUGGAUGAAAACCCUUCAAGGAUUACUGGAUAGAAUUCAGGCUUUCCCCUCCAGCCCCCAAUCAUAGCUCACAAACCUUCCUUGCUAUUUGUUCUUAAGUAAAAAAUCAUUUUUCCUCCUCCCUCCCCAAACCCCAAGGAACUCUCACUCUUGCUCAAGCUGUUCCGUCCCCUUACCACCCCUGAUACAACUGCCAGGUUAAUUUCCAGAAUUCUUGCAAGACUCAGU2000000009UCAGAAGUCACCUUCUUUCGUGAAUGUUUUGAUUCCCUGAGGCUACU2000000009UUAUUUUGGUAUGGCUGAAAAAUCCUAGAUUUUCUAAACAAAACCUGUUUGAAUCUUGGUUCUGAUAUGGACUAGGAGAGAGACUGGGUCAAGUAAGCUUAUCUCCCUGAGGCUGUUUCCUCGUCUGUUAAGUGUGAAUAUCAAUACCUGCCUUUCAUAAUCACCAGGGAAUAAAGUGGAAUAAUGUUGAUAACAGUGCUUGGCACCUGGAAGUAGGUGGCAGAUGUUAACGCCCUUCC2000000009UCCCUUGCACUGCGCCCCCUGUGCCUACCUCUAGCAUUGUAACGACCACGUAGUAUUGAAAUGGCCAGUUUACUUGUCUGCCUUCCUUUCCAAGACCGUUGGUGCCUAGAGGACUAGAAUCGUGUCCUAUUUA2000000006ACU

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	352	1313	1600	1643	1701	1864	2089	2494	2541	2780	2913
Modification Positions	Y	m6A	Y	Y	m6A	m6A	Y	Um	Y	Y	m6A
Genomic Coordinates	11:6617344:-	11:6614434:-	11:6614147:-	11:6614104:-	11:6614046:-	11:6613883:-	11:6613658:-	11:6613253:-	11:6613206:-	11:6612967:-	11:6612834:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq Yfn77uLS5tv8	ArijeGVTwYBw KTLz8piFYdwC WiQcrNTGZHPT BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	5FhTyQVy2tKW 8cMbzB4aD5Se ArijeGVTwYBw KTLz8piFYdwC nfCHyrYzE6fB BtsJQJ3DteUq S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	jaSvBXBkn3xs YkSG92k4EHDM	BtsJQJ3DteUq dknfVe6BK8aP iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP kx7BHU7ZycYE XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP kx7BHU7ZycYE XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8