General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000530304
Gene ID:	ENSG00000165494
Gene Name:	PCF11
Sequence (UNICHARACTER ENCODING)	GGUUGGGAACACAGACAUUUUCGGAGCUGGAGCCGCCACUGCCGCCGCCAUUUUGUGUCUGUGGAGAAAGAAGCUUCUGUGGCGGCUGGAAGUGGACGGAGAUCACCCGCGAGACGGCGGCGUUUCAUACCCGAGGUUCCCCCUGUGUCGUCCCCCAUCCCCCCUCCGCGGUCAGCAUGUGGUGAAGCCGGAGCCGCGAGAGAGCCGGGGAGAGGAAGAGGAGUCGGAAGGGAGGCGGGGUAUCCAGAGCGGCUUCAGCUUCAGCUGCAGCGGЖCCUCGGAGGGGGGCCGCGGCGCAAUGUCAGAGCAGACGCCGGCCGAGGCCGGUGCUGCGGGGGCCCGGGAGGACGCCUGUCGGGAUUAUCAGUCAUCGCUCGAAGACCUGACCUUCAAUAGCAAGCCGCACAUCAAUAUGCUGACCAUUCUAGCCGAGGAGAACCUGCCCUUCGCCAAGGAGAUCGUCUCUCUCAUCGAGGCCCAAACCGCCAAGGCUCCUUCCUCAGAGAAGCUUCCUGUUAUGUACCUUAUGGAUUCUAUUGUGAAAAACGUUGGAAGAGAGUAUCUCACUGCCUUUACUAAAAAUCUAGUUGCAACAUUUAUUUGUGUGUUUGAAAAGGUGGAUGAAAAUACUAGGAAAAGUUUAUUUAAGUUACGUUCUACAUGGGAUGAAAUAUUCCCUUUGAAGAAACUUUAUGCCCUGGAUGUCAGAGUCAAUUCAUUAGAUCCUGCUUGGCCUAUUAAACCUCUACCCCCCAAUGUGAAUACGUCUAGCAUCCAUGUGAAUCCUAAAUUUUUAAAUAAAUCGCCCGAGGAGCCUUCAACACCUGGUACAGUGGUCAGUUCCCCUAGCAUCUCCACUCCUCCAAUUGUUCCUGAUAUACAAAAGAAUCUUACACAAGAACAACUAAUAAGGCAGCAGUUACUGGCAAAGCAAAAACAGUUGUUAGAACUUCAGCAGAAAAAGCUGGAGCUUGAGCUAGAGCAAGCUAAGGCACAGUUGGCAGUUUCUCUUAGUGUUCAGCAGGAAACAUCCAAUUUAGGUCCUGGAUCUGCACCAUCCAAAUUACAUGUUUCACAGAUUCCCCCUAUGGCAGUUAAAGCUCCUCAUCAGGUUCCUGUGCAAUCUGAGAAAAGCCGUCCAGGACCAUCCUUACAAAUUCAGGAUUUAAAAGGAACUAACCGGGAUCCUCGUCUGAACAGGAUAAGCCAACAUUCUCAUGGAAAAGAUCAGAGUCACAGGAAAGAAUUUCUAAUGAACACAUUAAACCAGUCUGAUACUAAGACAAGUAAAACUAUACCCUCUGAAAAACUAAAUUCAUCCAAGCAAGAAAAAAGUAAAUCAGGUGAAAAAAUAACCAAGAAAGAACUUGACCAAUUAGAUUCUAAAUCGAAAUCGAAAUCGAAAUCACCCUCACCUUUGAAAAACAAAUUAUCUCACACAAAAGACUUGAAAAAUCAAGAAUCGGAAAGUAUGAGGUUGUCUGAUAUGAACAAGAGAGAUCCAAGAUUAAAAAAACAUCUUCAGGAUAAGACCGAUGGCAAAGAUGAUGAUGUGAAAGAGAAGAGAAAAACUGCAGAAAAAAAGGAUAAAGAUGAGCACAUGAAGUCAUCCGAACACAGЖCUGGCUGGAAGUAGAAAUAAAAUCAUAAAUGGCAUUGUACAAAAACAGGAUACAAUAACAGAAGAGUCAGAAAAACAGGGGACAAAACCAGGGAGAUCGAGUACUAGAAAGCGAUCAAGAUCUCGAUCACCCAAGUCUAGGUCACCAAUUAUACAUUCCCCAAAGAGAAGAGAUAGGCGGUCACCCAAACGAAGGCAAAGAAGUAUGUCUCCAACAUCGACACCUAAAGCUGGAAAGAUUCGCCAAUCUGGAGCUAAGCAGUCACAUAUGGAAGAGUUUACACCACCUUCUAGGGAAGACAGAAAUGCUAAGAGAAGUACUAAACAGGAUAUUCGGGAUCCAAGGCGAAUGAAAAAGACUGAAGAGGAGCGACCACAAGAAACUACAAAUCAGCAUUCUACAAAGUCAGGCACUGAACCAAAGGAGAAUGUAGAAAACUGGCAAAGUUCCAAGUCUGCCAAAAGAUGGAAAUCUGGUUGGGAAGAAAAUAAAAGCUUACAACAGGUUGAUGAACAUAGUAAACCUCCUCAUCUGAGGCAUAGGGAGAGCUGGUCAAGCACUAAAGGAAUUUUAUCACCUCGAGCCCCAAAGCAGCAACAGCAUCGAUUAAGUGUAGAUGCCAAUCUUCAGAUUCCUAAAGAGUUAACUCUUGCAAGCAAAAGAGAAUUACUUCAAAAGACGAGUGAACGUUUAGCAUCUGGUGAAAUUACACAGGAUGACUUCCUUGUUGUUGUGCAUCAAAUUCGACAGCUAUUUCAGUAUCAAGAAGGUGUGCGAGAAGAGCAGAGAUCUCCAUUCAAUGAUCGUUUUCCACUUAAGCGACCUCGAUAUGAAGAUUCAGAUAAACCAUUUGUAGAUAGUCCAGCAUCAAGAUUCGCCGGCCUGGAUACAAAUCAGCGACUUACAGCUUUAGCUGAAGACAGACCGUUAUUUGAUGGЖCCUAGUAGGCCAUCAGUAGCAAGAGAUGGCCCAACGAAGAUGAUUUUUGAAGGЖCCCAAUAAAUUAAGCCCUCGAAUUGAUGGЖCCUCCC
Sequence (SHORT NAMES ENCODING)	GGUUGGGAACACAGACAUUUUCGGAGCUGGAGCCGCCACUGCCGCCGCCAUUUUGUGUCUGUGGAGAAAGAAGCUUCUGUGGCGGCUGGAAGUGGACGGAGAUCACCCGCGAGACGGCGGCGUUUCAUACCCGAGGUUCCCCCUGUGUCGUCCCCCAUCCCCCCUCCGCGGUCAGCAUGUGGUGAAGCCGGAGCCGCGAGAGAGCCGGGGAGAGGAAGAGGAGUCGGAAGGGAGGCGGGGUAUCCAGAGCGGCUUCAGCUUCAGCUGCAGCGGm6ACCUCGGAGGGGGGCCGCGGCGCAAUGUCAGAGCAGACGCCGGCCGAGGCCGGUGCUGCGGGGGCCCGGGAGGACGCCUGUCGGGAUUAUCAGUCAUCGCUCGAAGACCUGACCUUCAAUAGCAAGCCGCACAUCAAUAUGCUGACCAUUCUAGCCGAGGAGAACCUGCCCUUCGCCAAGGAGAUCGUCUCUCUCAUCGAGGCCCAAACCGCCAAGGCUCCUUCCUCAGAGAAGCUUCCUGUUAUGUACCUUAUGGAUUCUAUUGUGAAAAACGUUGGAAGAGAGUAUCUCACUGCCUUUACUAAAAAUCUAGUUGCAACAUUUAUUUGUGUGUUUGAAAAGGUGGAUGAAAAUACUAGGAAAAGUUUAUUUAAGUUACGUUCUACAUGGGAUGAAAUAUUCCCUUUGAAGAAACUUUAUGCCCUGGAUGUCAGAGUCAAUUCAUUAGAUCCUGCUUGGCCUAUUAAACCUCUACCCCCCAAUGUGAAUACGUCUAGCAUCCAUGUGAAUCCUAAAUUUUUAAAUAAAUCGCCCGAGGAGCCUUCAACACCUGGUACAGUGGUCAGUUCCCCUAGCAUCUCCACUCCUCCAAUUGUUCCUGAUAUACAAAAGAAUCUUACACAAGAACAACUAAUAAGGCAGCAGUUACUGGCAAAGCAAAAACAGUUGUUAGAACUUCAGCAGAAAAAGCUGGAGCUUGAGCUAGAGCAAGCUAAGGCACAGUUGGCAGUUUCUCUUAGUGUUCAGCAGGAAACAUCCAAUUUAGGUCCUGGAUCUGCACCAUCCAAAUUACAUGUUUCACAGAUUCCCCCUAUGGCAGUUAAAGCUCCUCAUCAGGUUCCUGUGCAAUCUGAGAAAAGCCGUCCAGGACCAUCCUUACAAAUUCAGGAUUUAAAAGGAACUAACCGGGAUCCUCGUCUGAACAGGAUAAGCCAACAUUCUCAUGGAAAAGAUCAGAGUCACAGGAAAGAAUUUCUAAUGAACACAUUAAACCAGUCUGAUACUAAGACAAGUAAAACUAUACCCUCUGAAAAACUAAAUUCAUCCAAGCAAGAAAAAAGUAAAUCAGGUGAAAAAAUAACCAAGAAAGAACUUGACCAAUUAGAUUCUAAAUCGAAAUCGAAAUCGAAAUCACCCUCACCUUUGAAAAACAAAUUAUCUCACACAAAAGACUUGAAAAAUCAAGAAUCGGAAAGUAUGAGGUUGUCUGAUAUGAACAAGAGAGAUCCAAGAUUAAAAAAACAUCUUCAGGAUAAGACCGAUGGCAAAGAUGAUGAUGUGAAAGAGAAGAGAAAAACUGCAGAAAAAAAGGAUAAAGAUGAGCACAUGAAGUCAUCCGAACACAGm6ACUGGCUGGAAGUAGAAAUAAAAUCAUAAAUGGCAUUGUACAAAAACAGGAUACAAUAACAGAAGAGUCAGAAAAACAGGGGACAAAACCAGGGAGAUCGAGUACUAGAAAGCGAUCAAGAUCUCGAUCACCCAAGUCUAGGUCACCAAUUAUACAUUCCCCAAAGAGAAGAGAUAGGCGGUCACCCAAACGAAGGCAAAGAAGUAUGUCUCCAACAUCGACACCUAAAGCUGGAAAGAUUCGCCAAUCUGGAGCUAAGCAGUCACAUAUGGAAGAGUUUACACCACCUUCUAGGGAAGACAGAAAUGCUAAGAGAAGUACUAAACAGGAUAUUCGGGAUCCAAGGCGAAUGAAAAAGACUGAAGAGGAGCGACCACAAGAAACUACAAAUCAGCAUUCUACAAAGUCAGGCACUGAACCAAAGGAGAAUGUAGAAAACUGGCAAAGUUCCAAGUCUGCCAAAAGAUGGAAAUCUGGUUGGGAAGAAAAUAAAAGCUUACAACAGGUUGAUGAACAUAGUAAACCUCCUCAUCUGAGGCAUAGGGAGAGCUGGUCAAGCACUAAAGGAAUUUUAUCACCUCGAGCCCCAAAGCAGCAACAGCAUCGAUUAAGUGUAGAUGCCAAUCUUCAGAUUCCUAAAGAGUUAACUCUUGCAAGCAAAAGAGAAUUACUUCAAAAGACGAGUGAACGUUUAGCAUCUGGUGAAAUUACACAGGAUGACUUCCUUGUUGUUGUGCAUCAAAUUCGACAGCUAUUUCAGUAUCAAGAAGGUGUGCGAGAAGAGCAGAGAUCUCCAUUCAAUGAUCGUUUUCCACUUAAGCGACCUCGAUAUGAAGAUUCAGAUAAACCAUUUGUAGAUAGUCCAGCAUCAAGAUUCGCCGGCCUGGAUACAAAUCAGCGACUUACAGCUUUAGCUGAAGACAGACCGUUAUUUGAUGGm6ACCUAGUAGGCCAUCAGUAGCAAGAGAUGGCCCAACGAAGAUGAUUUUUGAAGGm6ACCCAAUAAAUUAAGCCCUCGAAUUGAUGGm6ACCUCCC
Sequence (MODOMICS CODE ENCODING)	GGUUGGGAACACAGACAUUUUCGGAGCUGGAGCCGCCACUGCCGCCGCCAUUUUGUGUCUGUGGAGAAAGAAGCUUCUGUGGCGGCUGGAAGUGGACGGAGAUCACCCGCGAGACGGCGGCGUUUCAUACCCGAGGUUCCCCCUGUGUCGUCCCCCAUCCCCCCUCCGCGGUCAGCAUGUGGUGAAGCCGGAGCCGCGAGAGAGCCGGGGAGAGGAAGAGGAGUCGGAAGGGAGGCGGGGUAUCCAGAGCGGCUUCAGCUUCAGCUGCAGCGG2000000006ACCUCGGAGGGGGGCCGCGGCGCAAUGUCAGAGCAGACGCCGGCCGAGGCCGGUGCUGCGGGGGCCCGGGAGGACGCCUGUCGGGAUUAUCAGUCAUCGCUCGAAGACCUGACCUUCAAUAGCAAGCCGCACAUCAAUAUGCUGACCAUUCUAGCCGAGGAGAACCUGCCCUUCGCCAAGGAGAUCGUCUCUCUCAUCGAGGCCCAAACCGCCAAGGCUCCUUCCUCAGAGAAGCUUCCUGUUAUGUACCUUAUGGAUUCUAUUGUGAAAAACGUUGGAAGAGAGUAUCUCACUGCCUUUACUAAAAAUCUAGUUGCAACAUUUAUUUGUGUGUUUGAAAAGGUGGAUGAAAAUACUAGGAAAAGUUUAUUUAAGUUACGUUCUACAUGGGAUGAAAUAUUCCCUUUGAAGAAACUUUAUGCCCUGGAUGUCAGAGUCAAUUCAUUAGAUCCUGCUUGGCCUAUUAAACCUCUACCCCCCAAUGUGAAUACGUCUAGCAUCCAUGUGAAUCCUAAAUUUUUAAAUAAAUCGCCCGAGGAGCCUUCAACACCUGGUACAGUGGUCAGUUCCCCUAGCAUCUCCACUCCUCCAAUUGUUCCUGAUAUACAAAAGAAUCUUACACAAGAACAACUAAUAAGGCAGCAGUUACUGGCAAAGCAAAAACAGUUGUUAGAACUUCAGCAGAAAAAGCUGGAGCUUGAGCUAGAGCAAGCUAAGGCACAGUUGGCAGUUUCUCUUAGUGUUCAGCAGGAAACAUCCAAUUUAGGUCCUGGAUCUGCACCAUCCAAAUUACAUGUUUCACAGAUUCCCCCUAUGGCAGUUAAAGCUCCUCAUCAGGUUCCUGUGCAAUCUGAGAAAAGCCGUCCAGGACCAUCCUUACAAAUUCAGGAUUUAAAAGGAACUAACCGGGAUCCUCGUCUGAACAGGAUAAGCCAACAUUCUCAUGGAAAAGAUCAGAGUCACAGGAAAGAAUUUCUAAUGAACACAUUAAACCAGUCUGAUACUAAGACAAGUAAAACUAUACCCUCUGAAAAACUAAAUUCAUCCAAGCAAGAAAAAAGUAAAUCAGGUGAAAAAAUAACCAAGAAAGAACUUGACCAAUUAGAUUCUAAAUCGAAAUCGAAAUCGAAAUCACCCUCACCUUUGAAAAACAAAUUAUCUCACACAAAAGACUUGAAAAAUCAAGAAUCGGAAAGUAUGAGGUUGUCUGAUAUGAACAAGAGAGAUCCAAGAUUAAAAAAACAUCUUCAGGAUAAGACCGAUGGCAAAGAUGAUGAUGUGAAAGAGAAGAGAAAAACUGCAGAAAAAAAGGAUAAAGAUGAGCACAUGAAGUCAUCCGAACACAG2000000006ACUGGCUGGAAGUAGAAAUAAAAUCAUAAAUGGCAUUGUACAAAAACAGGAUACAAUAACAGAAGAGUCAGAAAAACAGGGGACAAAACCAGGGAGAUCGAGUACUAGAAAGCGAUCAAGAUCUCGAUCACCCAAGUCUAGGUCACCAAUUAUACAUUCCCCAAAGAGAAGAGAUAGGCGGUCACCCAAACGAAGGCAAAGAAGUAUGUCUCCAACAUCGACACCUAAAGCUGGAAAGAUUCGCCAAUCUGGAGCUAAGCAGUCACAUAUGGAAGAGUUUACACCACCUUCUAGGGAAGACAGAAAUGCUAAGAGAAGUACUAAACAGGAUAUUCGGGAUCCAAGGCGAAUGAAAAAGACUGAAGAGGAGCGACCACAAGAAACUACAAAUCAGCAUUCUACAAAGUCAGGCACUGAACCAAAGGAGAAUGUAGAAAACUGGCAAAGUUCCAAGUCUGCCAAAAGAUGGAAAUCUGGUUGGGAAGAAAAUAAAAGCUUACAACAGGUUGAUGAACAUAGUAAACCUCCUCAUCUGAGGCAUAGGGAGAGCUGGUCAAGCACUAAAGGAAUUUUAUCACCUCGAGCCCCAAAGCAGCAACAGCAUCGAUUAAGUGUAGAUGCCAAUCUUCAGAUUCCUAAAGAGUUAACUCUUGCAAGCAAAAGAGAAUUACUUCAAAAGACGAGUGAACGUUUAGCAUCUGGUGAAAUUACACAGGAUGACUUCCUUGUUGUUGUGCAUCAAAUUCGACAGCUAUUUCAGUAUCAAGAAGGUGUGCGAGAAGAGCAGAGAUCUCCAUUCAAUGAUCGUUUUCCACUUAAGCGACCUCGAUAUGAAGAUUCAGAUAAACCAUUUGUAGAUAGUCCAGCAUCAAGAUUCGCCGGCCUGGAUACAAAUCAGCGACUUACAGCUUUAGCUGAAGACAGACCGUUAUUUGAUGG2000000006ACCUAGUAGGCCAUCAGUAGCAAGAGAUGGCCCAACGAAGAUGAUUUUUGAAGG2000000006ACCCAAUAAAUUAAGCCCUCGAAUUGAUGG2000000006ACCUCCC

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	274	1620	2559	2613	2643
Modification Positions	m6A	m6A	m6A	m6A	m6A
Genomic Coordinates	11:83157416:+	11:83166220:+	11:83168597:+	11:83168651:+	11:83168681:+
Level of Experimental Evidence	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	3TeAZFYFxgvp 5FhTyQVy2tKW 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Yfn77uLS5tv8	msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BkoLW2CBToyL	3TeAZFYFxgvp 5FhTyQVy2tKW msuJfBpJvM5H UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BkoLW2CBToyL Lny8GcCeVGc9 UKen6WEino9G	3TeAZFYFxgvp Mg9GixDBFQAT msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 8cMbzB4aD5Se UKen6WEino9G	3TeAZFYFxgvp 6AyXsheySjfx aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 8cMbzB4aD5Se ArijeGVTwYBw