General Data

RNA Type	unknown
Original Source	Sci-ModoM
Transcript ID:	ENST00000525717
Gene ID:	ENSG00000162191
Gene Name:	UBXN1
Sequence (UNICHARACTER ENCODING)	GUCGGUGUUCCCGGCUGCUAUAGAGCCGGGUGAGAGAGCGAGCGCCCGUCGGCGGGUGUCGAGGGCGGGUUGCCUCGCGCUGACCCUUCCCGCCCPCCUUCUCGUCACACACCAGGUCCCCGCGGAAGCCGCGGUGUCGGCGCCAUGGCGGAGCUGACGGCUCUUGAGAGUCUCAUCGAGAUGGGCUUCCCCAGGGGACGCGCGGAGAAGGCUCUGGCCCUCACAGGGAACCAGGGCAUCGAGGCUGCGAUGGACUGGCUGAUGGAGCACGAAGACGACCCCGAUGUGGACGAGCCUPUAGAGACUCCCCUUGGACAUAUCCUGGGACGGGAGCCCACUUCCUCAGAGCAAGGCGGCCUUGAAGGAUCUGGUUCUGCUGCCGGAGAAGGCAAACCCGCUUUGAGUGAAGAGGAAAGACAGGAACAAACUAAGAGGAUGUUGGAGCUGGUGGCCCAGAAGCAGCGGGAGCGUGAAGAAAGAGAGGAACGGGAGGCAUUGGAACGGGAACGGCAGCGCAGGAGACAAGGGCAAGAGUUGUCAGCAGCACGACAGCGGCUACAGGAAGAUGAGAUGCGCCGGGCUGCUGAGGAGAGGCGGAGGGAAAAGGCCGAGGAGUUAGCAGCCAGACAAAGAGUUAGAGAAAAGAUCGAGAGGGACAAAGCЖGAGAGAGCCAAGAAGGUAGGUGACUGAGAAGACGCCACGGGUAAUGGAGUGGGCAGGUUAGUAAAUCUUUUCCAGCUUCAGAGGGAAAGCAUGGGCUUAUAUGAUCUGUUUCACCUGAGGAUGGGUGAGUACCUGAUUGACUGUUUUACUUUGCCCUUUAGUAUGGUGGCAGUGUGGGCUCUCAGCCACCCCCAGUGGCACCAGAGCCAGGUCCUGUUCCCUCUUCUCCCAGCCAGGAGCCUCCCACCAAGCGGGAGUAUGACCAGUGUCGCAUACAGGUCAGGCUGCCAGAUGGGACCUCACUGACCCAGACGUUCCGGGCCCGGGAACAGCUGGCAGCUGUGAGGCUCUAUGUGGAGCUCCACCGUGGGGAGGAACUAGGUGGGGGCCAGGACCCUGUGCAAUUGCUCAGUGGCUUCCCCAGACGGGCCUUCUCAGAAGCUGACAUGGAGCGGCCUCUGCAGGAGCUGGGACUCGUGCCUUCUGCUGUUCUCAUUGUGGCCAAGAAAUGUCCCAGCUGAGGGCCUUUGUCCCAUUGUCCCUCUGUGACCCCUUCAUCUUUGAUAAAGCACUGACAUCUCCUUCCUAAUAAAU
Sequence (SHORT NAMES ENCODING)	GUCGGUGUUCCCGGCUGCUAUAGAGCCGGGUGAGAGAGCGAGCGCCCGUCGGCGGGUGUCGAGGGCGGGUUGCCUCGCGCUGACCCUUCCCGCCCYCCUUCUCGUCACACACCAGGUCCCCGCGGAAGCCGCGGUGUCGGCGCCAUGGCGGAGCUGACGGCUCUUGAGAGUCUCAUCGAGAUGGGCUUCCCCAGGGGACGCGCGGAGAAGGCUCUGGCCCUCACAGGGAACCAGGGCAUCGAGGCUGCGAUGGACUGGCUGAUGGAGCACGAAGACGACCCCGAUGUGGACGAGCCUYUAGAGACUCCCCUUGGACAUAUCCUGGGACGGGAGCCCACUUCCUCAGAGCAAGGCGGCCUUGAAGGAUCUGGUUCUGCUGCCGGAGAAGGCAAACCCGCUUUGAGUGAAGAGGAAAGACAGGAACAAACUAAGAGGAUGUUGGAGCUGGUGGCCCAGAAGCAGCGGGAGCGUGAAGAAAGAGAGGAACGGGAGGCAUUGGAACGGGAACGGCAGCGCAGGAGACAAGGGCAAGAGUUGUCAGCAGCACGACAGCGGCUACAGGAAGAUGAGAUGCGCCGGGCUGCUGAGGAGAGGCGGAGGGAAAAGGCCGAGGAGUUAGCAGCCAGACAAAGAGUUAGAGAAAAGAUCGAGAGGGACAAAGCm6AGAGAGAGCCAAGAAGGUAGGUGACUGAGAAGACGCCACGGGUAAUGGAGUGGGCAGGUUAGUAAAUCUUUUCCAGCUUCAGAGGGAAAGCAUGGGCUUAUAUGAUCUGUUUCACCUGAGGAUGGGUGAGUACCUGAUUGACUGUUUUACUUUGCCCUUUAGUAUGGUGGCAGUGUGGGCUCUCAGCCACCCCCAGUGGCACCAGAGCCAGGUCCUGUUCCCUCUUCUCCCAGCCAGGAGCCUCCCACCAAGCGGGAGUAUGACCAGUGUCGCAUACAGGUCAGGCUGCCAGAUGGGACCUCACUGACCCAGACGUUCCGGGCCCGGGAACAGCUGGCAGCUGUGAGGCUCUAUGUGGAGCUCCACCGUGGGGAGGAACUAGGUGGGGGCCAGGACCCUGUGCAAUUGCUCAGUGGCUUCCCCAGACGGGCCUUCUCAGAAGCUGACAUGGAGCGGCCUCUGCAGGAGCUGGGACUCGUGCCUUCUGCUGUUCUCAUUGUGGCCAAGAAAUGUCCCAGCUGAGGGCCUUUGUCCCAUUGUCCCUCUGUGACCCCUUCAUCUUUGAUAAAGCACUGACAUCUCCUUCCUAAUAAAU
Sequence (MODOMICS CODE ENCODING)	GUCGGUGUUCCCGGCUGCUAUAGAGCCGGGUGAGAGAGCGAGCGCCCGUCGGCGGGUGUCGAGGGCGGGUUGCCUCGCGCUGACCCUUCCCGCCC2000000009UCCUUCUCGUCACACACCAGGUCCCCGCGGAAGCCGCGGUGUCGGCGCCAUGGCGGAGCUGACGGCUCUUGAGAGUCUCAUCGAGAUGGGCUUCCCCAGGGGACGCGCGGAGAAGGCUCUGGCCCUCACAGGGAACCAGGGCAUCGAGGCUGCGAUGGACUGGCUGAUGGAGCACGAAGACGACCCCGAUGUGGACGAGCCU2000000009UUAGAGACUCCCCUUGGACAUAUCCUGGGACGGGAGCCCACUUCCUCAGAGCAAGGCGGCCUUGAAGGAUCUGGUUCUGCUGCCGGAGAAGGCAAACCCGCUUUGAGUGAAGAGGAAAGACAGGAACAAACUAAGAGGAUGUUGGAGCUGGUGGCCCAGAAGCAGCGGGAGCGUGAAGAAAGAGAGGAACGGGAGGCAUUGGAACGGGAACGGCAGCGCAGGAGACAAGGGCAAGAGUUGUCAGCAGCACGACAGCGGCUACAGGAAGAUGAGAUGCGCCGGGCUGCUGAGGAGAGGCGGAGGGAAAAGGCCGAGGAGUUAGCAGCCAGACAAAGAGUUAGAGAAAAGAUCGAGAGGGACAAAGC2000000006AGAGAGAGCCAAGAAGGUAGGUGACUGAGAAGACGCCACGGGUAAUGGAGUGGGCAGGUUAGUAAAUCUUUUCCAGCUUCAGAGGGAAAGCAUGGGCUUAUAUGAUCUGUUUCACCUGAGGAUGGGUGAGUACCUGAUUGACUGUUUUACUUUGCCCUUUAGUAUGGUGGCAGUGUGGGCUCUCAGCCACCCCCAGUGGCACCAGAGCCAGGUCCUGUUCCCUCUUCUCCCAGCCAGGAGCCUCCCACCAAGCGGGAGUAUGACCAGUGUCGCAUACAGGUCAGGCUGCCAGAUGGGACCUCACUGACCCAGACGUUCCGGGCCCGGGAACAGCUGGCAGCUGUGAGGCUCUAUGUGGAGCUCCACCGUGGGGAGGAACUAGGUGGGGGCCAGGACCCUGUGCAAUUGCUCAGUGGCUUCCCCAGACGGGCCUUCUCAGAAGCUGACAUGGAGCGGCCUCUGCAGGAGCUGGGACUCGUGCCUUCUGCUGUUCUCAUUGUGGCCAAGAAAUGUCCCAGCUGAGGGCCUUUGUCCCAUUGUCCCUCUGUGACCCCUUCAUCUUUGAUAAAGCACUGACAUCUCCUUCCUAAUAAAU

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	96	298	663
Modification Positions	Y	Y	m6A
Genomic Coordinates	11:62678972:-	11:62678561:-	11:62677796:-
Level of Experimental Evidence	3	3	3
Level of Experimental Reliability	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	834aFpha8RvT dA7YoLwHrzgR JASnTTw2HeNE ksEP666umrV9 NKGM8wdLLrnu ZuM5xpZmNuDL