General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000429801
Gene ID:	ENSG00000110713
Gene Name:	NUP98
Sequence (UNICHARACTER ENCODING)	GUUAGAAGAGAGCAUGCCUGAGGAUCAGGAACCUGUGUCUGCCUCAACACAUAUUGCAUCUUCACUGGGAAUUAAUCCACAUGUCUUACЖGAUCAUGAAAGCAUCAUUGCUUACUGAUGAAGAAGAUGUAGAUAUGGCACUGGAUCAACGCUUCAGUCGCCUGCCUUCCAAAGCAGAUACUUCUCAAGAAAUCUGUUCUCCCAGACUCCCCAUUUCAGCAUCCCACUCGUCGAAAACUCGUUCACUAGUUGGUGGGUUACUACAAUCAAAAUUUACAAGUGGAGCUUUUCUUUCACCAAGUGUCUCUGUGCAAGAAUGUCGUACUCCCAGAGCAGCAUCUPUAAUGAAUAUCCCAUCCACAUCCUCUUGCCUAACUGAGUCCCCAUUCAAAGUUCACUUAGAAAAACUCAGUUUGAGACAAAGAAAGCCAGAUGAAGACAUGAAAUUAUAUCAGACACCUCUGGAGCUCAAAUUAAAACACAGCACUGUCCAUGUGGAUGAACUGUGUCCUCUCAUUGUCCCCAAUCUGGGAGUUGCUGUCAUUCAUGACUAUGCAGAUUGGGUUAAAGAAGCAUCAGGAGACUUACCAGAAGCACAAAUUGUGAAGCACUGGAGCCUGACAUGGЖCACUAUGUGAAGCCCUAUGGGGCCACCUGAAGGAGCUUGACAGCCAGCUAAAUGAACCCCGUGAAUACAUUCAAAUUCUGGAGCGAAGAAGAGCUUUCUCCCGCUGGCUAUCCUGUACUGCCACACCUCAGAUUGAAGAGGAAGUCUCCUUAACCCAAAAAAACAGCCCUGUGGAGGCUGUAUUCAGCUACCUCACAGGCAAAAGGAUCAGUGAGGCCUGCUCUCUGGCCCAGCAGUCAGGGGAUCAUCGUCUUGCUCUUCUUUUAUCUCAGUUUGUGGGUAGCCAGUCAGUCCGGGAGCUGCUCACCAUGCAGUUGGUGGACUGGCAUCAGCUCCAAGCAGACUCCUUCAPCCAGGAUGAGAGACUGCGCAUCUUUGCUCUGUUGGCUGGAAAACCGGUGUGGCAGCUCUCAGAAAAGAAGCAAAUAAACGUGUGCUCCCAGUUGGAUUGGAAACGCUCCCUGGCUAUCCAUCUUUGGUAUUUGCUUCCACCAACAGCCUCCAUUUCUAGGGCGCUCAGCAUGUAUGAAGAAGCAUUUCAGAAUACCUCUGACAGUGACAGAUAUGCCUGCUCCCCACUUCCUUCGUAUCUGGAGGGUUCUGGCUGUGUGAUAGCGGAGGAGCAAAACUCACAGACACCACUUCGAGAUGUCUGCUUUCACCUUCUAAAACUCUACAGUGACAGACAUUAUGAUCUCAACCAGCUGCUGGAGCCUCGAAGCAPAЖCAGCAGAUCCUUUGGACUACCGCCUAAGCUGGCACUUGUGGGAAGUGCUGAGGGCUCUUAЖCUACACCCAUCUCUCAGCGCAGUGUGAAGGUGUGCUACAGGCCAGUUACGCUGGCCAGCUUGAAAGUGAGGGGCUCUGGGAGUGGGCCAUCUUUGUCCUCCUGCACAUUGACAACUCAGGCAUACGUGAGAAGGCUGUUCGAGAGCUGCUUACCCGGCACUGCCAGCUGUUGGAGACCCCUGAAUCUUGGGCUAAAGAGACUUUCCUUACCCAGAAGCUCCGUGUACCUGCCAAAUGGAUCCACGAGGCCAAAGCUGUGCGAGCACACAUGGAAUCUGACAAGCACUUAGAGGCCCUUUGCUUAUUUAAGGCUGAGCACUGGAACCGCUGCCACAAGCUCAUCAPCCGACACUUAGCUUCUGAUGCCAUCAUUAAUGAGAACUAUGACUACCUGAAGGGGUUCUUGGAAGACCUGGCACCUCCAGAGCGCAGCAGCCUAAUUCAGGAUUGGGAAACAUCUGGGCUUGUUUACCUGGACUAUAUUAGAGUCAUUGAAAUGCUCCGCCAUAUACAGCAGGUGGAUUGCUCAGGUAAUGACCUGGAGCAGUUACACAUCAAAGUGACUUCACUGUGCAGUCGGAUAGAGCAGAUUCAGUGUUACAGUGCUAAAGAUCGCCUGGCUCAGUCAGACAUGGCCAAACGUGUAGCCAACCUGCUGCGCGUGGUGCUGAGUCUGCAUCAPCCUCCUGAUAGAACCUCCGACUCAACACCAGACCCUCAGCGAGUCCCUUUGCGCCUCUUGGCUCCCCACAUUGGCCGGCUUCCCAUGCCUGAGGACUAUGCCAUGGACGAЖCUGCGCAGCCUUACCCAGUCCUAUCUGCGAGAЖCUGGCUGUUGGGAGCCUGUGAGCCCCAGGCACUUUGCAUCACAGUCACAUGCCCAUUCACACCACACAGAGGUUCCCUGCCUUGUUUGGAUUGGCACUGUUUGCCAUUCUCUGGGUUGGCUGUGGCAUCUACCCUCCCUCCCUGCUGCCAGAAGCAGCAPCCUCCACUUGUUCAGGGCUUUUCUUAAUACUGAACGUAGCAUAAGGGCUUCUGGAACCCAGAAGAGGAGACAGUUUACCAPCCUCAAGAUCAUUCAGUGUUUUUCCUPUAAAAAAAUGGUCAAUAAAGCUCCUUUGGCAGAA
Sequence (SHORT NAMES ENCODING)	GUUAGAAGAGAGCAUGCCUGAGGAUCAGGAACCUGUGUCUGCCUCAACACAUAUUGCAUCUUCACUGGGAAUUAAUCCACAUGUCUUACm6AGAUCAUGAAAGCAUCAUUGCUUACUGAUGAAGAAGAUGUAGAUAUGGCACUGGAUCAACGCUUCAGUCGCCUGCCUUCCAAAGCAGAUACUUCUCAAGAAAUCUGUUCUCCCAGACUCCCCAUUUCAGCAUCCCACUCGUCGAAAACUCGUUCACUAGUUGGUGGGUUACUACAAUCAAAAUUUACAAGUGGAGCUUUUCUUUCACCAAGUGUCUCUGUGCAAGAAUGUCGUACUCCCAGAGCAGCAUCUYUAAUGAAUAUCCCAUCCACAUCCUCUUGCCUAACUGAGUCCCCAUUCAAAGUUCACUUAGAAAAACUCAGUUUGAGACAAAGAAAGCCAGAUGAAGACAUGAAAUUAUAUCAGACACCUCUGGAGCUCAAAUUAAAACACAGCACUGUCCAUGUGGAUGAACUGUGUCCUCUCAUUGUCCCCAAUCUGGGAGUUGCUGUCAUUCAUGACUAUGCAGAUUGGGUUAAAGAAGCAUCAGGAGACUUACCAGAAGCACAAAUUGUGAAGCACUGGAGCCUGACAUGGm6ACACUAUGUGAAGCCCUAUGGGGCCACCUGAAGGAGCUUGACAGCCAGCUAAAUGAACCCCGUGAAUACAUUCAAAUUCUGGAGCGAAGAAGAGCUUUCUCCCGCUGGCUAUCCUGUACUGCCACACCUCAGAUUGAAGAGGAAGUCUCCUUAACCCAAAAAAACAGCCCUGUGGAGGCUGUAUUCAGCUACCUCACAGGCAAAAGGAUCAGUGAGGCCUGCUCUCUGGCCCAGCAGUCAGGGGAUCAUCGUCUUGCUCUUCUUUUAUCUCAGUUUGUGGGUAGCCAGUCAGUCCGGGAGCUGCUCACCAUGCAGUUGGUGGACUGGCAUCAGCUCCAAGCAGACUCCUUCAYCCAGGAUGAGAGACUGCGCAUCUUUGCUCUGUUGGCUGGAAAACCGGUGUGGCAGCUCUCAGAAAAGAAGCAAAUAAACGUGUGCUCCCAGUUGGAUUGGAAACGCUCCCUGGCUAUCCAUCUUUGGUAUUUGCUUCCACCAACAGCCUCCAUUUCUAGGGCGCUCAGCAUGUAUGAAGAAGCAUUUCAGAAUACCUCUGACAGUGACAGAUAUGCCUGCUCCCCACUUCCUUCGUAUCUGGAGGGUUCUGGCUGUGUGAUAGCGGAGGAGCAAAACUCACAGACACCACUUCGAGAUGUCUGCUUUCACCUUCUAAAACUCUACAGUGACAGACAUUAUGAUCUCAACCAGCUGCUGGAGCCUCGAAGCAYAm6ACAGCAGAUCCUUUGGACUACCGCCUAAGCUGGCACUUGUGGGAAGUGCUGAGGGCUCUUAm6ACUACACCCAUCUCUCAGCGCAGUGUGAAGGUGUGCUACAGGCCAGUUACGCUGGCCAGCUUGAAAGUGAGGGGCUCUGGGAGUGGGCCAUCUUUGUCCUCCUGCACAUUGACAACUCAGGCAUACGUGAGAAGGCUGUUCGAGAGCUGCUUACCCGGCACUGCCAGCUGUUGGAGACCCCUGAAUCUUGGGCUAAAGAGACUUUCCUUACCCAGAAGCUCCGUGUACCUGCCAAAUGGAUCCACGAGGCCAAAGCUGUGCGAGCACACAUGGAAUCUGACAAGCACUUAGAGGCCCUUUGCUUAUUUAAGGCUGAGCACUGGAACCGCUGCCACAAGCUCAUCAYCCGACACUUAGCUUCUGAUGCCAUCAUUAAUGAGAACUAUGACUACCUGAAGGGGUUCUUGGAAGACCUGGCACCUCCAGAGCGCAGCAGCCUAAUUCAGGAUUGGGAAACAUCUGGGCUUGUUUACCUGGACUAUAUUAGAGUCAUUGAAAUGCUCCGCCAUAUACAGCAGGUGGAUUGCUCAGGUAAUGACCUGGAGCAGUUACACAUCAAAGUGACUUCACUGUGCAGUCGGAUAGAGCAGAUUCAGUGUUACAGUGCUAAAGAUCGCCUGGCUCAGUCAGACAUGGCCAAACGUGUAGCCAACCUGCUGCGCGUGGUGCUGAGUCUGCAUCAYCCUCCUGAUAGAACCUCCGACUCAACACCAGACCCUCAGCGAGUCCCUUUGCGCCUCUUGGCUCCCCACAUUGGCCGGCUUCCCAUGCCUGAGGACUAUGCCAUGGACGAm6ACUGCGCAGCCUUACCCAGUCCUAUCUGCGAGAm6ACUGGCUGUUGGGAGCCUGUGAGCCCCAGGCACUUUGCAUCACAGUCACAUGCCCAUUCACACCACACAGAGGUUCCCUGCCUUGUUUGGAUUGGCACUGUUUGCCAUUCUCUGGGUUGGCUGUGGCAUCUACCCUCCCUCCCUGCUGCCAGAAGCAGCAYCCUCCACUUGUUCAGGGCUUUUCUUAAUACUGAACGUAGCAUAAGGGCUUCUGGAACCCAGAAGAGGAGACAGUUUACCAYCCUCAAGAUCAUUCAGUGUUUUUCCUYUAAAAAAAUGGUCAAUAAAGCUCCUUUGGCAGAA
Sequence (MODOMICS CODE ENCODING)	GUUAGAAGAGAGCAUGCCUGAGGAUCAGGAACCUGUGUCUGCCUCAACACAUAUUGCAUCUUCACUGGGAAUUAAUCCACAUGUCUUAC2000000006AGAUCAUGAAAGCAUCAUUGCUUACUGAUGAAGAAGAUGUAGAUAUGGCACUGGAUCAACGCUUCAGUCGCCUGCCUUCCAAAGCAGAUACUUCUCAAGAAAUCUGUUCUCCCAGACUCCCCAUUUCAGCAUCCCACUCGUCGAAAACUCGUUCACUAGUUGGUGGGUUACUACAAUCAAAAUUUACAAGUGGAGCUUUUCUUUCACCAAGUGUCUCUGUGCAAGAAUGUCGUACUCCCAGAGCAGCAUCU2000000009UUAAUGAAUAUCCCAUCCACAUCCUCUUGCCUAACUGAGUCCCCAUUCAAAGUUCACUUAGAAAAACUCAGUUUGAGACAAAGAAAGCCAGAUGAAGACAUGAAAUUAUAUCAGACACCUCUGGAGCUCAAAUUAAAACACAGCACUGUCCAUGUGGAUGAACUGUGUCCUCUCAUUGUCCCCAAUCUGGGAGUUGCUGUCAUUCAUGACUAUGCAGAUUGGGUUAAAGAAGCAUCAGGAGACUUACCAGAAGCACAAAUUGUGAAGCACUGGAGCCUGACAUGG2000000006ACACUAUGUGAAGCCCUAUGGGGCCACCUGAAGGAGCUUGACAGCCAGCUAAAUGAACCCCGUGAAUACAUUCAAAUUCUGGAGCGAAGAAGAGCUUUCUCCCGCUGGCUAUCCUGUACUGCCACACCUCAGAUUGAAGAGGAAGUCUCCUUAACCCAAAAAAACAGCCCUGUGGAGGCUGUAUUCAGCUACCUCACAGGCAAAAGGAUCAGUGAGGCCUGCUCUCUGGCCCAGCAGUCAGGGGAUCAUCGUCUUGCUCUUCUUUUAUCUCAGUUUGUGGGUAGCCAGUCAGUCCGGGAGCUGCUCACCAUGCAGUUGGUGGACUGGCAUCAGCUCCAAGCAGACUCCUUCA2000000009UCCAGGAUGAGAGACUGCGCAUCUUUGCUCUGUUGGCUGGAAAACCGGUGUGGCAGCUCUCAGAAAAGAAGCAAAUAAACGUGUGCUCCCAGUUGGAUUGGAAACGCUCCCUGGCUAUCCAUCUUUGGUAUUUGCUUCCACCAACAGCCUCCAUUUCUAGGGCGCUCAGCAUGUAUGAAGAAGCAUUUCAGAAUACCUCUGACAGUGACAGAUAUGCCUGCUCCCCACUUCCUUCGUAUCUGGAGGGUUCUGGCUGUGUGAUAGCGGAGGAGCAAAACUCACAGACACCACUUCGAGAUGUCUGCUUUCACCUUCUAAAACUCUACAGUGACAGACAUUAUGAUCUCAACCAGCUGCUGGAGCCUCGAAGCA2000000009UA2000000006ACAGCAGAUCCUUUGGACUACCGCCUAAGCUGGCACUUGUGGGAAGUGCUGAGGGCUCUUA2000000006ACUACACCCAUCUCUCAGCGCAGUGUGAAGGUGUGCUACAGGCCAGUUACGCUGGCCAGCUUGAAAGUGAGGGGCUCUGGGAGUGGGCCAUCUUUGUCCUCCUGCACAUUGACAACUCAGGCAUACGUGAGAAGGCUGUUCGAGAGCUGCUUACCCGGCACUGCCAGCUGUUGGAGACCCCUGAAUCUUGGGCUAAAGAGACUUUCCUUACCCAGAAGCUCCGUGUACCUGCCAAAUGGAUCCACGAGGCCAAAGCUGUGCGAGCACACAUGGAAUCUGACAAGCACUUAGAGGCCCUUUGCUUAUUUAAGGCUGAGCACUGGAACCGCUGCCACAAGCUCAUCA2000000009UCCGACACUUAGCUUCUGAUGCCAUCAUUAAUGAGAACUAUGACUACCUGAAGGGGUUCUUGGAAGACCUGGCACCUCCAGAGCGCAGCAGCCUAAUUCAGGAUUGGGAAACAUCUGGGCUUGUUUACCUGGACUAUAUUAGAGUCAUUGAAAUGCUCCGCCAUAUACAGCAGGUGGAUUGCUCAGGUAAUGACCUGGAGCAGUUACACAUCAAAGUGACUUCACUGUGCAGUCGGAUAGAGCAGAUUCAGUGUUACAGUGCUAAAGAUCGCCUGGCUCAGUCAGACAUGGCCAAACGUGUAGCCAACCUGCUGCGCGUGGUGCUGAGUCUGCAUCA2000000009UCCUCCUGAUAGAACCUCCGACUCAACACCAGACCCUCAGCGAGUCCCUUUGCGCCUCUUGGCUCCCCACAUUGGCCGGCUUCCCAUGCCUGAGGACUAUGCCAUGGACGA2000000006ACUGCGCAGCCUUACCCAGUCCUAUCUGCGAGA2000000006ACUGGCUGUUGGGAGCCUGUGAGCCCCAGGCACUUUGCAUCACAGUCACAUGCCCAUUCACACCACACAGAGGUUCCCUGCCUUGUUUGGAUUGGCACUGUUUGCCAUUCUCUGGGUUGGCUGUGGCAUCUACCCUCCCUCCCUGCUGCCAGAAGCAGCA2000000009UCCUCCACUUGUUCAGGGCUUUUCUUAAUACUGAACGUAGCAUAAGGGCUUCUGGAACCCAGAAGAGGAGACAGUUUACCA2000000009UCCUCAAGAUCAUUCAGUGUUUUUCCU2000000009UUAAAAAAAUGGUCAAUAAAGCUCCUUUGGCAGAA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	90	341	626	978	1350	1352	1413	1758	2095	2206	2239	2399	2480	2507
Modification Positions	m6A	Y	m6A	Y	Y	m6A	m6A	Y	Y	m6A	m6A	Y	Y	Y
Genomic Coordinates	11:3706446:-	11:3702800:-	11:3699322:-	11:3695495:-	11:3686156:-	11:3686154:-	11:3686093:-	11:3683217:-	11:3676324:-	11:3676213:-	11:3676180:-	11:3676020:-	11:3675939:-	11:3675912:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	3kRDPWwiRCgi L6w2k2VEv4EY	BtsJQJ3DteUq Yfn77uLS5tv8	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U 8cMbzB4aD5Se KTLz8piFYdwC Lny8GcCeVGc9 BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn ArijeGVTwYBw Lny8GcCeVGc9 UKen6WEino9G BtsJQJ3DteUq dknfVe6BK8aP iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8