General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000540317
Gene ID:	ENSG00000162144
Gene Name:	CYB561A3
Sequence (UNICHARACTER ENCODING)	UAUAAGAAGGCGAGGCGGCACCCGCCGCUCUGCUCUGGGGCGGCAUUGCCAGCCGGCUGUAGGCAUUCAGGGCAGUGUCUUCUGCAUCUCCUAGGAACCUCGGGAGCGGCAGCUCCGGCGCCUGGUAGCGAGAGGCGGGUUCCGGAGAUCCCGGCCUCACUUCGUCCCACUGUGGUUAGGGCGUCACUGGUGUACCGCCUGCCCCAGUCGUGGGUGGGGCCCAAЖCUGCCCUGGAAACUCCPCCAUGCAGCGCUGCACCUGAUGGCCUUCGUCCUCACUGUUGUGGGGCUGGUUGCUGUCUPUACGUUUCACAACCAUGGAAGGACUGCCAACCUCUACUCCCUUCACAGCUGGCUGGGCAUCACCACUGUCUUCCUCUUCGCCUGCCAGUGGUUCCUGGGCUUUGCUGUCUUCCUCCUGCCCUGGGCGUCCAUGUGGCUGCGCAGCCUCCUAAAACCUAUCCACGUCUUUUUUGGAGCCGCCAPCCUCUCUCUGUCCAUCGCAPCCGUCAUUUCGGGCAUUAAUGAGAAGCUUUUCUUCAGUUUGUGAGUGCAGUGGGGUCCCCAACUCUAAGGAAAAACACCACCAGGCCAUACCACAGCCUGCCCAGUGAGGCGGUCUUUGCCAACAGCACCGGGAUGCUGGUGGUGGCCUUUGGGCUGCUGGUGCUCUACAPCCUUCUGGCUUCAUCUUGGAAGCGCCCAGAGCCGGGGAUCCUGACCGACAGACAGCUGCUGCUACAGCUGAGGCCUGGAUCCCGGCCUUUCCCUGUGACUUACGUGUCUGUCACCGGCAGGCAGCCCUACЖAAUCCUGGUGACCUGCUCUCCCAAGAACAGAGCCUGUCCCCAGAUGUCCCAGUAGCGAUGAGUAACAGAGGUGGCUGUGGЖCUUCCUCUACUUCUCCUUGCUGGAUCAGGGCCUUCCUGCCUCCCGCUGGGCAGGUCUGGCCUUGCUCUCUUGGCAGGGCCCCAGCCCCUCUGACCACUCUGCAGCUCACCAUGCAGCUGAUGCCAAAGUUGUGGUGUCCAGUGUGCAGCAGCCCUGGGAGCCACUGCCACCUUCAGAGGGGUUCCUUGCUGAGACCCACAUUGCUUCACCUGGCCCCACCAUGGCUGCUUGCCUGGCCCAACCUA#CGUUCUGUGCCAUGCUAGAGCUUGAGCUGUUGCUCUUCUUCAGGGGAGGAAAUAGGGUGGAGAGCGGGAAGGGUCUUGCUCCUAAGUGUUGCUGCUGUGGCUUUUUUGCCUUCUCCAAAGACGCACUGCCAGGUCCCAAGCUUCAGACUGCUGUGCUUAGUAAGCAAGUGAGAAGCCUGGGGUUUGGAGCCCACCUACUCUCUGGCAGCAUCAGCAPCCUACUCCUGGCAACAUCAGGCCAACGUCCACCCCAGCCUCACAUUGCCAGAUGUUGGCAGAAGGGCUAAUAUUGACCGUCUUGACUGGCUGGAGCCUUCAAAGCCACUGGGAUGUCCPCCAGGCACCUGGGUCCCAUGACCAGCUCCCCAUCUCCAUAGGGGUAGGCAUUUCACUGGUUUAUGAAGCUCGAGUUUCAUUAAAUAU
Sequence (SHORT NAMES ENCODING)	UAUAAGAAGGCGAGGCGGCACCCGCCGCUCUGCUCUGGGGCGGCAUUGCCAGCCGGCUGUAGGCAUUCAGGGCAGUGUCUUCUGCAUCUCCUAGGAACCUCGGGAGCGGCAGCUCCGGCGCCUGGUAGCGAGAGGCGGGUUCCGGAGAUCCCGGCCUCACUUCGUCCCACUGUGGUUAGGGCGUCACUGGUGUACCGCCUGCCCCAGUCGUGGGUGGGGCCCAAm6ACUGCCCUGGAAACUCCYCCAUGCAGCGCUGCACCUGAUGGCCUUCGUCCUCACUGUUGUGGGGCUGGUUGCUGUCUYUACGUUUCACAACCAUGGAAGGACUGCCAACCUCUACUCCCUUCACAGCUGGCUGGGCAUCACCACUGUCUUCCUCUUCGCCUGCCAGUGGUUCCUGGGCUUUGCUGUCUUCCUCCUGCCCUGGGCGUCCAUGUGGCUGCGCAGCCUCCUAAAACCUAUCCACGUCUUUUUUGGAGCCGCCAYCCUCUCUCUGUCCAUCGCAYCCGUCAUUUCGGGCAUUAAUGAGAAGCUUUUCUUCAGUUUGUGAGUGCAGUGGGGUCCCCAACUCUAAGGAAAAACACCACCAGGCCAUACCACAGCCUGCCCAGUGAGGCGGUCUUUGCCAACAGCACCGGGAUGCUGGUGGUGGCCUUUGGGCUGCUGGUGCUCUACAYCCUUCUGGCUUCAUCUUGGAAGCGCCCAGAGCCGGGGAUCCUGACCGACAGACAGCUGCUGCUACAGCUGAGGCCUGGAUCCCGGCCUUUCCCUGUGACUUACGUGUCUGUCACCGGCAGGCAGCCCUACm6AAAUCCUGGUGACCUGCUCUCCCAAGAACAGAGCCUGUCCCCAGAUGUCCCAGUAGCGAUGAGUAACAGAGGUGGCUGUGGm6ACUUCCUCUACUUCUCCUUGCUGGAUCAGGGCCUUCCUGCCUCCCGCUGGGCAGGUCUGGCCUUGCUCUCUUGGCAGGGCCCCAGCCCCUCUGACCACUCUGCAGCUCACCAUGCAGCUGAUGCCAAAGUUGUGGUGUCCAGUGUGCAGCAGCCCUGGGAGCCACUGCCACCUUCAGAGGGGUUCCUUGCUGAGACCCACAUUGCUUCACCUGGCCCCACCAUGGCUGCUUGCCUGGCCCAACCUAGmCGUUCUGUGCCAUGCUAGAGCUUGAGCUGUUGCUCUUCUUCAGGGGAGGAAAUAGGGUGGAGAGCGGGAAGGGUCUUGCUCCUAAGUGUUGCUGCUGUGGCUUUUUUGCCUUCUCCAAAGACGCACUGCCAGGUCCCAAGCUUCAGACUGCUGUGCUUAGUAAGCAAGUGAGAAGCCUGGGGUUUGGAGCCCACCUACUCUCUGGCAGCAUCAGCAYCCUACUCCUGGCAACAUCAGGCCAACGUCCACCCCAGCCUCACAUUGCCAGAUGUUGGCAGAAGGGCUAAUAUUGACCGUCUUGACUGGCUGGAGCCUUCAAAGCCACUGGGAUGUCCYCCAGGCACCUGGGUCCCAUGACCAGCUCCCCAUCUCCAUAGGGGUAGGCAUUUCACUGGUUUAUGAAGCUCGAGUUUCAUUAAAUAU
Sequence (MODOMICS CODE ENCODING)	UAUAAGAAGGCGAGGCGGCACCCGCCGCUCUGCUCUGGGGCGGCAUUGCCAGCCGGCUGUAGGCAUUCAGGGCAGUGUCUUCUGCAUCUCCUAGGAACCUCGGGAGCGGCAGCUCCGGCGCCUGGUAGCGAGAGGCGGGUUCCGGAGAUCCCGGCCUCACUUCGUCCCACUGUGGUUAGGGCGUCACUGGUGUACCGCCUGCCCCAGUCGUGGGUGGGGCCCAA2000000006ACUGCCCUGGAAACUCC2000000009UCCAUGCAGCGCUGCACCUGAUGGCCUUCGUCCUCACUGUUGUGGGGCUGGUUGCUGUCU2000000009UUACGUUUCACAACCAUGGAAGGACUGCCAACCUCUACUCCCUUCACAGCUGGCUGGGCAUCACCACUGUCUUCCUCUUCGCCUGCCAGUGGUUCCUGGGCUUUGCUGUCUUCCUCCUGCCCUGGGCGUCCAUGUGGCUGCGCAGCCUCCUAAAACCUAUCCACGUCUUUUUUGGAGCCGCCA2000000009UCCUCUCUCUGUCCAUCGCA2000000009UCCGUCAUUUCGGGCAUUAAUGAGAAGCUUUUCUUCAGUUUGUGAGUGCAGUGGGGUCCCCAACUCUAAGGAAAAACACCACCAGGCCAUACCACAGCCUGCCCAGUGAGGCGGUCUUUGCCAACAGCACCGGGAUGCUGGUGGUGGCCUUUGGGCUGCUGGUGCUCUACA2000000009UCCUUCUGGCUUCAUCUUGGAAGCGCCCAGAGCCGGGGAUCCUGACCGACAGACAGCUGCUGCUACAGCUGAGGCCUGGAUCCCGGCCUUUCCCUGUGACUUACGUGUCUGUCACCGGCAGGCAGCCCUAC2000000006AAAUCCUGGUGACCUGCUCUCCCAAGAACAGAGCCUGUCCCCAGAUGUCCCAGUAGCGAUGAGUAACAGAGGUGGCUGUGG2000000006ACUUCCUCUACUUCUCCUUGCUGGAUCAGGGCCUUCCUGCCUCCCGCUGGGCAGGUCUGGCCUUGCUCUCUUGGCAGGGCCCCAGCCCCUCUGACCACUCUGCAGCUCACCAUGCAGCUGAUGCCAAAGUUGUGGUGUCCAGUGUGCAGCAGCCCUGGGAGCCACUGCCACCUUCAGAGGGGUUCCUUGCUGAGACCCACAUUGCUUCACCUGGCCCCACCAUGGCUGCUUGCCUGGCCCAACCUA2000000090GCGUUCUGUGCCAUGCUAGAGCUUGAGCUGUUGCUCUUCUUCAGGGGAGGAAAUAGGGUGGAGAGCGGGAAGGGUCUUGCUCCUAAGUGUUGCUGCUGUGGCUUUUUUGCCUUCUCCAAAGACGCACUGCCAGGUCCCAAGCUUCAGACUGCUGUGCUUAGUAAGCAAGUGAGAAGCCUGGGGUUUGGAGCCCACCUACUCUCUGGCAGCAUCAGCA2000000009UCCUACUCCUGGCAACAUCAGGCCAACGUCCACCCCAGCCUCACAUUGCCAGAUGUUGGCAGAAGGGCUAAUAUUGACCGUCUUGACUGGCUGGAGCCUUCAAAGCCACUGGGAUGUCC2000000009UCCAGGCACCUGGGUCCCAUGACCAGCUCCCCAUCUCCAUAGGGGUAGGCAUUUCACUGGUUUAUGAAGCUCGAGUUUCAUUAAAUAU

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	225	242	302	485	505	676	807	888	1134	1351	1470
Modification Positions	m6A	Y	Y	Y	Y	Y	m6A	m6A	Gm	Y	Y
Genomic Coordinates	11:61353949:-	11:61353932:-	11:61353872:-	11:61353045:-	11:61353025:-	11:61351046:-	11:61349568:-	11:61349487:-	11:61349241:-	11:61349024:-	11:61348905:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq bXBqJigD9oV3 f6YSioLdAWpr Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 f6YSioLdAWpr Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 f6YSioLdAWpr Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 f6YSioLdAWpr Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Yfn77uLS5tv8	3kRDPWwiRCgi L6w2k2VEv4EY 834aFpha8RvT dA7YoLwHrzgR ksEP666umrV9 ZuM5xpZmNuDL	3TeAZFYFxgvp 5Nnepx5V7yHo 6UuHp6YApVKv aivdrAsbdKEU gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 834aFpha8RvT dA7YoLwHrzgR ksEP666umrV9 ZuM5xpZmNuDL BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	jaSvBXBkn3xs YkSG92k4EHDM	BtsJQJ3DteUq bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6 JkWoGWVwjNda Yfn77uLS5tv8