General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000448745
Gene ID:	ENSG00000149532
Gene Name:	CPSF7
Sequence (UNICHARACTER ENCODING)	UCCGAAUCCCGCAGUGGCAUCUUCCUUACUUUGUCCAPCCUCCGGACUCGCGAUCUUCCUUCCGGAGCCAUGUCAGAAGGAGUGGACUUGAUUGAUAUAUAUGCUGACGAGGAGUUCAACCAGGACCCAGAGUUCAACAAUACAGAUCAGAUUGACCUGUAUGAUGAUGUGCUGACAGCCACCUCACAGCCCUCAGAUGACAGAAGCAGCAGCACUGAЖCCACCPCCUCCUGUUCGCCAGGAGCCAUCUCCCAAGCCCAACAACAAGACCCCUGCAAUUCUGUAUACCUACAGUGGCCUGCGUAAUAGACGAGCUGCCGUUUAUGUGGGCAGCUUCUCCUGGUGGACCACAGACCAGCAGCUGAUCCAGGUUAUUCGCUCUAUAGGAGUCUAUGAUGUGGUGGAGUUGAAAUUUGCAGAGAAUCGAGCAAAUGGCCAGUCCAAAGGGUAUGCUGAGGUGGUGGUAGCCUCUGAAAACUCUGUCCACAAAUUGUUGGAACUCCUACCAGGGAAAGUUCUUAAUGGAGAAAAAGUGGACGUGAGGCCGGCCACCCGGCAGAACCUGUCACAGUUUGAGGCACAGGCUCGGAAACGAAUACCUCCЖCGGGCCCAUUCCCGAGAUUCUAGUGAUUCUGCUGAUGGACGGGCCACACCCUCUGAGAACCUUGUACCCUCAUCUGCUCGUGUGGAUAAGCCCCCCAGUGUGCUGCCCUACUUCAAUCGUCCUCCUUCGGCCCUUCCCCUGAUGGGUCUGCCCCCACCACCAAUUCCACCCCCACCACCUCUCUCCUCAAGCUUUGGGGUCCCUCCUCCPCCUCCUGGUAUCCACUACCAGCAUCUCAUGCCCCCACCUCCUCGAUUACCUCCUCAUCUUGCUGUACCUCCCCCUGGGGCCAUCCCACCUGCCCUUCACCUCAAUCCAGCCUUCUUCCCCCCACCAAACGCUACAGUGGGGCCUCCACCAGAUACUUACAUGAAGGCCUCUGCCCCCUAUAACCACCAUGGCAGCCGAGAUUCGGGCCCUCCACCCUCUACAGUGAGUGAAGCCGAAUUUGAAGAUAUCAUGAAGCGAAACAGAGCAAUUUCCAGCAGUGCCAUUUCCAAAGCAGUAUCUGGAGCCAGUGCAGGGGAUUACAGUGACGCAAUUGAGACGCUGCUCACAGCCAUUGCGGUUAUCAAЖCAGUCCCGGGUUGCCAAUGAUGAGCGUUGCCGUGUCCUCAUCUCCUCUCUUAAGGACUGUCUUCAUGGCAUCGAAGCCAAGUCCUACЖGUGUGGGUGCCAGUGGGAGCUCUUCCAGGAAAAGACAUCGCUCCCGGGAAAGGUCACCUAGCCGGUCCCGGGAGAGCAGCAGGAGGCACCGGGAUCUGCUUCAUAAUGAAGAUCGGCAUGAUGAUUAUUUCCAAGAAAGGAACCGGGAGCAUGAGAGACACCGGGAUAGAGAACGGGACCGGCACCACUGAGAAAGGAGUCUGGUUGGAAGCAAAUGUUUUUUUAAUGGЖCUUGCAUCUCCUCACCUUGAUCAGGЖCUAAAGGACGGAGGCCGCCCCACCCCCUUCCCUUUCCUCCAAACCCCUAACUCCCPCCAGACACCCAGGGAAUACCCUCUGCCCCACAGGAUUGAAGACUGCUUGGCAGUCCUCCCAAUCCCACACCUCCUGUUUGCCAGGGGAAAGAACCUAAAGЖCUUCGUGUGAUUGGGAGGGGUGGCAGACAGGAAGAAAACAUGUCCAGGCCCCUGGUCUCCAUAGAGAAU
Sequence (SHORT NAMES ENCODING)	UCCGAAUCCCGCAGUGGCAUCUUCCUUACUUUGUCCAYCCUCCGGACUCGCGAUCUUCCUUCCGGAGCCAUGUCAGAAGGAGUGGACUUGAUUGAUAUAUAUGCUGACGAGGAGUUCAACCAGGACCCAGAGUUCAACAAUACAGAUCAGAUUGACCUGUAUGAUGAUGUGCUGACAGCCACCUCACAGCCCUCAGAUGACAGAAGCAGCAGCACUGAm6ACCACCYCCUCCUGUUCGCCAGGAGCCAUCUCCCAAGCCCAACAACAAGACCCCUGCAAUUCUGUAUACCUACAGUGGCCUGCGUAAUAGACGAGCUGCCGUUUAUGUGGGCAGCUUCUCCUGGUGGACCACAGACCAGCAGCUGAUCCAGGUUAUUCGCUCUAUAGGAGUCUAUGAUGUGGUGGAGUUGAAAUUUGCAGAGAAUCGAGCAAAUGGCCAGUCCAAAGGGUAUGCUGAGGUGGUGGUAGCCUCUGAAAACUCUGUCCACAAAUUGUUGGAACUCCUACCAGGGAAAGUUCUUAAUGGAGAAAAAGUGGACGUGAGGCCGGCCACCCGGCAGAACCUGUCACAGUUUGAGGCACAGGCUCGGAAACGAAUACCUCCm6ACGGGCCCAUUCCCGAGAUUCUAGUGAUUCUGCUGAUGGACGGGCCACACCCUCUGAGAACCUUGUACCCUCAUCUGCUCGUGUGGAUAAGCCCCCCAGUGUGCUGCCCUACUUCAAUCGUCCUCCUUCGGCCCUUCCCCUGAUGGGUCUGCCCCCACCACCAAUUCCACCCCCACCACCUCUCUCCUCAAGCUUUGGGGUCCCUCCUCCYCCUCCUGGUAUCCACUACCAGCAUCUCAUGCCCCCACCUCCUCGAUUACCUCCUCAUCUUGCUGUACCUCCCCCUGGGGCCAUCCCACCUGCCCUUCACCUCAAUCCAGCCUUCUUCCCCCCACCAAACGCUACAGUGGGGCCUCCACCAGAUACUUACAUGAAGGCCUCUGCCCCCUAUAACCACCAUGGCAGCCGAGAUUCGGGCCCUCCACCCUCUACAGUGAGUGAAGCCGAAUUUGAAGAUAUCAUGAAGCGAAACAGAGCAAUUUCCAGCAGUGCCAUUUCCAAAGCAGUAUCUGGAGCCAGUGCAGGGGAUUACAGUGACGCAAUUGAGACGCUGCUCACAGCCAUUGCGGUUAUCAAm6ACAGUCCCGGGUUGCCAAUGAUGAGCGUUGCCGUGUCCUCAUCUCCUCUCUUAAGGACUGUCUUCAUGGCAUCGAAGCCAAGUCCUACm6AGUGUGGGUGCCAGUGGGAGCUCUUCCAGGAAAAGACAUCGCUCCCGGGAAAGGUCACCUAGCCGGUCCCGGGAGAGCAGCAGGAGGCACCGGGAUCUGCUUCAUAAUGAAGAUCGGCAUGAUGAUUAUUUCCAAGAAAGGAACCGGGAGCAUGAGAGACACCGGGAUAGAGAACGGGACCGGCACCACUGAGAAAGGAGUCUGGUUGGAAGCAAAUGUUUUUUUAAUGGm6ACUUGCAUCUCCUCACCUUGAUCAGGm6ACUAAAGGACGGAGGCCGCCCCACCCCCUUCCCUUUCCUCCAAACCCCUAACUCCCYCCAGACACCCAGGGAAUACCCUCUGCCCCACAGGAUUGAAGACUGCUUGGCAGUCCUCCCAAUCCCACACCUCCUGUUUGCCAGGGGAAAGAACCUAAAGm6ACUUCGUGUGAUUGGGAGGGGUGGCAGACAGGAAGAAAACAUGUCCAGGCCCCUGGUCUCCAUAGAGAAU
Sequence (MODOMICS CODE ENCODING)	UCCGAAUCCCGCAGUGGCAUCUUCCUUACUUUGUCCA2000000009UCCUCCGGACUCGCGAUCUUCCUUCCGGAGCCAUGUCAGAAGGAGUGGACUUGAUUGAUAUAUAUGCUGACGAGGAGUUCAACCAGGACCCAGAGUUCAACAAUACAGAUCAGAUUGACCUGUAUGAUGAUGUGCUGACAGCCACCUCACAGCCCUCAGAUGACAGAAGCAGCAGCACUGA2000000006ACCACC2000000009UCCUCCUGUUCGCCAGGAGCCAUCUCCCAAGCCCAACAACAAGACCCCUGCAAUUCUGUAUACCUACAGUGGCCUGCGUAAUAGACGAGCUGCCGUUUAUGUGGGCAGCUUCUCCUGGUGGACCACAGACCAGCAGCUGAUCCAGGUUAUUCGCUCUAUAGGAGUCUAUGAUGUGGUGGAGUUGAAAUUUGCAGAGAAUCGAGCAAAUGGCCAGUCCAAAGGGUAUGCUGAGGUGGUGGUAGCCUCUGAAAACUCUGUCCACAAAUUGUUGGAACUCCUACCAGGGAAAGUUCUUAAUGGAGAAAAAGUGGACGUGAGGCCGGCCACCCGGCAGAACCUGUCACAGUUUGAGGCACAGGCUCGGAAACGAAUACCUCC2000000006ACGGGCCCAUUCCCGAGAUUCUAGUGAUUCUGCUGAUGGACGGGCCACACCCUCUGAGAACCUUGUACCCUCAUCUGCUCGUGUGGAUAAGCCCCCCAGUGUGCUGCCCUACUUCAAUCGUCCUCCUUCGGCCCUUCCCCUGAUGGGUCUGCCCCCACCACCAAUUCCACCCCCACCACCUCUCUCCUCAAGCUUUGGGGUCCCUCCUCC2000000009UCCUCCUGGUAUCCACUACCAGCAUCUCAUGCCCCCACCUCCUCGAUUACCUCCUCAUCUUGCUGUACCUCCCCCUGGGGCCAUCCCACCUGCCCUUCACCUCAAUCCAGCCUUCUUCCCCCCACCAAACGCUACAGUGGGGCCUCCACCAGAUACUUACAUGAAGGCCUCUGCCCCCUAUAACCACCAUGGCAGCCGAGAUUCGGGCCCUCCACCCUCUACAGUGAGUGAAGCCGAAUUUGAAGAUAUCAUGAAGCGAAACAGAGCAAUUUCCAGCAGUGCCAUUUCCAAAGCAGUAUCUGGAGCCAGUGCAGGGGAUUACAGUGACGCAAUUGAGACGCUGCUCACAGCCAUUGCGGUUAUCAA2000000006ACAGUCCCGGGUUGCCAAUGAUGAGCGUUGCCGUGUCCUCAUCUCCUCUCUUAAGGACUGUCUUCAUGGCAUCGAAGCCAAGUCCUAC2000000006AGUGUGGGUGCCAGUGGGAGCUCUUCCAGGAAAAGACAUCGCUCCCGGGAAAGGUCACCUAGCCGGUCCCGGGAGAGCAGCAGGAGGCACCGGGAUCUGCUUCAUAAUGAAGAUCGGCAUGAUGAUUAUUUCCAAGAAAGGAACCGGGAGCAUGAGAGACACCGGGAUAGAGAACGGGACCGGCACCACUGAGAAAGGAGUCUGGUUGGAAGCAAAUGUUUUUUUAAUGG2000000006ACUUGCAUCUCCUCACCUUGAUCAGG2000000006ACUAAAGGACGGAGGCCGCCCCACCCCCUUCCCUUUCCUCCAAACCCCUAACUCCC2000000009UCCAGACACCCAGGGAAUACCCUCUGCCCCACAGGAUUGAAGACUGCUUGGCAGUCCUCCCAAUCCCACACCUCCUGUUUGCCAGGGGAAAGAACCUAAAG2000000006ACUUCGUGUGAUUGGGAGGGGUGGCAGACAGGAAGAAAACAUGUCCAGGCCCCUGGUCUCCAUAGAGAAU

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	38	219	225	603	813	1179	1267	1497	1523	1579	1680
Modification Positions	Y	m6A	Y	m6A	Y	m6A	m6A	m6A	m6A	Y	m6A
Genomic Coordinates	11:61429267:-	11:61421513:-	11:61421507:-	11:61416509:-	11:61416299:-	11:61411885:-	11:61411797:-	11:61404671:-	11:61404645:-	11:61404589:-	11:61404488:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq bXBqJigD9oV3 Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 Yfn77uLS5tv8	834aFpha8RvT dA7YoLwHrzgR ksEP666umrV9	BtsJQJ3DteUq bXBqJigD9oV3 Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 Yfn77uLS5tv8	3kRDPWwiRCgi L6w2k2VEv4EY	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U D6ncpa2PPWj3 93arJtwJmuS9 ArijeGVTwYBw BkoLW2CBToyL WiQcrNTGZHPT KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 PF5iqBNSbHaa UKen6WEino9G dA7YoLwHrzgR BtsJQJ3DteUq bXBqJigD9oV3 S9vNeQQYrhac Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn ArijeGVTwYBw KTLz8piFYdwC WiQcrNTGZHPT KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 PF5iqBNSbHaa UKen6WEino9G BtsJQJ3DteUq bXBqJigD9oV3 f6YSioLdAWpr iezFbUdmY3A6 Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 Yfn77uLS5tv8	3TeAZFYFxgvp 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U D6ncpa2PPWj3 93arJtwJmuS9 ArijeGVTwYBw KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 UKen6WEino9G BtsJQJ3DteUq bXBqJigD9oV3 f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8