General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000294161
Gene ID:	ENSG00000162222
Gene Name:	TTC9C
Sequence (UNICHARACTER ENCODING)	UCUGAUUGGGUGGUGUGGCGCAAUGCGCGCGACCCUCAAGAUACCAAACUGUACGCAUCUCUGACCCUUUCCUCUCCUUGCUCCUGCUGGUAAACCGAAGCCCAGGAGACUUCCAGGUUUGGGCAUCUGCAGAGGGCGAGGAACUGGUCACGGCGCCGGGUGGGCUUGCAGCUGUGACGCUUAUGUGGACACCUCAGUGUCGCUGGUGGUUCACCUCGGCUUCCCAGUUUAUUUAUUGACGUCAACAAAUAAAUGUUGAAUAAGGAAGAAGAGUUAGAAUUGCUUGAAGCCCUCUGGAGUUUUAGCACUAGUCCCGCCCACUCCCUUCUACUUCCAGGUCGGGGGGGGGCGGGUCCAAUAGAAAGGCGGAAGCCAGUGUCCCAGGCGUUCUCACGCCCGCAACAAUUCCUGAGUAGGGCCUUGCUUGAGUUCUUCGGAAAGUCUCAPCCACCCCCACAUCGCCUCUPUAGGAAGUCACUUAAUGUUGGGCUUCAUUAUUCCCACAPCCCUUUCCUUACUACUUGCCUGCACUUCUUGAGAAAAAGЖCUGCAGAAAGGAGAGGUGGGGCUUUCAGUAGAAACAAGCAAACCGCAGGUCCCUGUGGGGGGACUCUCCAGGAAGAAGGUUCCGCAAGAACCGUGGGCGACAGUUAUGGAGAAGCGUCUGCAGGAGGCUCAGCUGUACAAGGAGGAAGGGAACCAGCGCUACCGGGAAGGGAAGUACCGAGAUGCUGUGAGUAGGUACCAUCGAGCUCUGCUUCAGCUGCGGGGUCUGGAUCCGAGUCUGCCCUCUCCGUUACCUAAUCUCGGACCUCAGGGCCCGGCCCUCACGCCUGAACAAGAAAACAUAUUGCAUACCACCCAGACAGACUGCUAUAACAAUCUAGCUGUUGUGAAAUAGGGAGUGUUUCCCUUCUUAAUCAUAAAAAGGCAGAACAUUGACCUGAAUUGCCUGAAUUGACUCCUCUGCAGCUUGUCUCCUUCAGAUGGAGCCCGUGAACUACGAACGAGUGAGAGAAUAUAGUCAGAAAGUCCUGGAACGACAGCCUGAUAAUGCCAAGGCCUUGUAUCGGGCCGGAGUGGCCUUUUUCCAUCUGCAGGACUAUGЖCCAGGCCCGCCACUACCPCCUGGCUGCCGUGAAUAGGCAGCCUAAAGGUAAGCAAGAAGGGCUUUGAAAUGGUAAAGACAAAAUUGUCUUGCUGGGGUGGAUCUGUGGAAAGGGGGUUUUAUUUUACUUUGCCAAUGUAUUAUUUUCAAUAAGUAAUACAUUCACAUGGUUGAGAAUUCGAACUGAAAAAGUAUACGAUGAACAGACCUUUUUCCACUCUUGUGUUCUUGUCUCCACAGAAAAGCAGUAUUAUUAGUUUCAUGUGUAGGGGGUUGAUGCUUAAUCAGACAUACACAAUAUAUAUGUUGGUAUGUCUGUUUCAUAUAUGUAUGUAUGCCUAUUCUAAUAUAUAAAUAUAUGUAUAUCAACGUGCUUUUAUUUAUAAAUAUACAGUGUAUAUAUUUAUACAUAUACAUGAAUAUAUAUAUAAAAUAGGCAGGCCAGGUGGGGUGGCUCACAUCUGUUAUCUCAGCACUUUGGGAGACCAAAGUGGGUGGAUCACCUGAGGUCAGGAGUUUGAGACCAGCCUGACCAACAUGGAGAAACCCCAUCUCUACUAAAAAUACAAAAUUAGCCAGGCAUGGUGGCGCAUGCCUGUAAACCCAGCUACUCGGGAGGCUGAGGCAGGAGAAUUGCUUGAACCCAGGAGGCGGAGGUUGCGGUGAGCCGAGAUCCUGGGCAACAAGAACGAGAUUCUGUCUCAAAAAAAAAAAAAAAAAAAAAAAA
Sequence (SHORT NAMES ENCODING)	UCUGAUUGGGUGGUGUGGCGCAAUGCGCGCGACCCUCAAGAUACCAAACUGUACGCAUCUCUGACCCUUUCCUCUCCUUGCUCCUGCUGGUAAACCGAAGCCCAGGAGACUUCCAGGUUUGGGCAUCUGCAGAGGGCGAGGAACUGGUCACGGCGCCGGGUGGGCUUGCAGCUGUGACGCUUAUGUGGACACCUCAGUGUCGCUGGUGGUUCACCUCGGCUUCCCAGUUUAUUUAUUGACGUCAACAAAUAAAUGUUGAAUAAGGAAGAAGAGUUAGAAUUGCUUGAAGCCCUCUGGAGUUUUAGCACUAGUCCCGCCCACUCCCUUCUACUUCCAGGUCGGGGGGGGGCGGGUCCAAUAGAAAGGCGGAAGCCAGUGUCCCAGGCGUUCUCACGCCCGCAACAAUUCCUGAGUAGGGCCUUGCUUGAGUUCUUCGGAAAGUCUCAYCCACCCCCACAUCGCCUCUYUAGGAAGUCACUUAAUGUUGGGCUUCAUUAUUCCCACAYCCCUUUCCUUACUACUUGCCUGCACUUCUUGAGAAAAAGm6ACUGCAGAAAGGAGAGGUGGGGCUUUCAGUAGAAACAAGCAAACCGCAGGUCCCUGUGGGGGGACUCUCCAGGAAGAAGGUUCCGCAAGAACCGUGGGCGACAGUUAUGGAGAAGCGUCUGCAGGAGGCUCAGCUGUACAAGGAGGAAGGGAACCAGCGCUACCGGGAAGGGAAGUACCGAGAUGCUGUGAGUAGGUACCAUCGAGCUCUGCUUCAGCUGCGGGGUCUGGAUCCGAGUCUGCCCUCUCCGUUACCUAAUCUCGGACCUCAGGGCCCGGCCCUCACGCCUGAACAAGAAAACAUAUUGCAUACCACCCAGACAGACUGCUAUAACAAUCUAGCUGUUGUGAAAUAGGGAGUGUUUCCCUUCUUAAUCAUAAAAAGGCAGAACAUUGACCUGAAUUGCCUGAAUUGACUCCUCUGCAGCUUGUCUCCUUCAGAUGGAGCCCGUGAACUACGAACGAGUGAGAGAAUAUAGUCAGAAAGUCCUGGAACGACAGCCUGAUAAUGCCAAGGCCUUGUAUCGGGCCGGAGUGGCCUUUUUCCAUCUGCAGGACUAUGm6ACCAGGCCCGCCACUACCYCCUGGCUGCCGUGAAUAGGCAGCCUAAAGGUAAGCAAGAAGGGCUUUGAAAUGGUAAAGACAAAAUUGUCUUGCUGGGGUGGAUCUGUGGAAAGGGGGUUUUAUUUUACUUUGCCAAUGUAUUAUUUUCAAUAAGUAAUACAUUCACAUGGUUGAGAAUUCGAACUGAAAAAGUAUACGAUGAACAGACCUUUUUCCACUCUUGUGUUCUUGUCUCCACAGAAAAGCAGUAUUAUUAGUUUCAUGUGUAGGGGGUUGAUGCUUAAUCAGACAUACACAAUAUAUAUGUUGGUAUGUCUGUUUCAUAUAUGUAUGUAUGCCUAUUCUAAUAUAUAAAUAUAUGUAUAUCAACGUGCUUUUAUUUAUAAAUAUACAGUGUAUAUAUUUAUACAUAUACAUGAAUAUAUAUAUAAAAUAGGCAGGCCAGGUGGGGUGGCUCACAUCUGUUAUCUCAGCACUUUGGGAGACCAAAGUGGGUGGAUCACCUGAGGUCAGGAGUUUGAGACCAGCCUGACCAACAUGGAGAAACCCCAUCUCUACUAAAAAUACAAAAUUAGCCAGGCAUGGUGGCGCAUGCCUGUAAACCCAGCUACUCGGGAGGCUGAGGCAGGAGAAUUGCUUGAACCCAGGAGGCGGAGGUUGCGGUGAGCCGAGAUCCUGGGCAACAAGAACGAGAUUCUGUCUCAAAAAAAAAAAAAAAAAAAAAAAA
Sequence (MODOMICS CODE ENCODING)	UCUGAUUGGGUGGUGUGGCGCAAUGCGCGCGACCCUCAAGAUACCAAACUGUACGCAUCUCUGACCCUUUCCUCUCCUUGCUCCUGCUGGUAAACCGAAGCCCAGGAGACUUCCAGGUUUGGGCAUCUGCAGAGGGCGAGGAACUGGUCACGGCGCCGGGUGGGCUUGCAGCUGUGACGCUUAUGUGGACACCUCAGUGUCGCUGGUGGUUCACCUCGGCUUCCCAGUUUAUUUAUUGACGUCAACAAAUAAAUGUUGAAUAAGGAAGAAGAGUUAGAAUUGCUUGAAGCCCUCUGGAGUUUUAGCACUAGUCCCGCCCACUCCCUUCUACUUCCAGGUCGGGGGGGGGCGGGUCCAAUAGAAAGGCGGAAGCCAGUGUCCCAGGCGUUCUCACGCCCGCAACAAUUCCUGAGUAGGGCCUUGCUUGAGUUCUUCGGAAAGUCUCA2000000009UCCACCCCCACAUCGCCUCU2000000009UUAGGAAGUCACUUAAUGUUGGGCUUCAUUAUUCCCACA2000000009UCCCUUUCCUUACUACUUGCCUGCACUUCUUGAGAAAAAG2000000006ACUGCAGAAAGGAGAGGUGGGGCUUUCAGUAGAAACAAGCAAACCGCAGGUCCCUGUGGGGGGACUCUCCAGGAAGAAGGUUCCGCAAGAACCGUGGGCGACAGUUAUGGAGAAGCGUCUGCAGGAGGCUCAGCUGUACAAGGAGGAAGGGAACCAGCGCUACCGGGAAGGGAAGUACCGAGAUGCUGUGAGUAGGUACCAUCGAGCUCUGCUUCAGCUGCGGGGUCUGGAUCCGAGUCUGCCCUCUCCGUUACCUAAUCUCGGACCUCAGGGCCCGGCCCUCACGCCUGAACAAGAAAACAUAUUGCAUACCACCCAGACAGACUGCUAUAACAAUCUAGCUGUUGUGAAAUAGGGAGUGUUUCCCUUCUUAAUCAUAAAAAGGCAGAACAUUGACCUGAAUUGCCUGAAUUGACUCCUCUGCAGCUUGUCUCCUUCAGAUGGAGCCCGUGAACUACGAACGAGUGAGAGAAUAUAGUCAGAAAGUCCUGGAACGACAGCCUGAUAAUGCCAAGGCCUUGUAUCGGGCCGGAGUGGCCUUUUUCCAUCUGCAGGACUAUG2000000006ACCAGGCCCGCCACUACC2000000009UCCUGGCUGCCGUGAAUAGGCAGCCUAAAGGUAAGCAAGAAGGGCUUUGAAAUGGUAAAGACAAAAUUGUCUUGCUGGGGUGGAUCUGUGGAAAGGGGGUUUUAUUUUACUUUGCCAAUGUAUUAUUUUCAAUAAGUAAUACAUUCACAUGGUUGAGAAUUCGAACUGAAAAAGUAUACGAUGAACAGACCUUUUUCCACUCUUGUGUUCUUGUCUCCACAGAAAAGCAGUAUUAUUAGUUUCAUGUGUAGGGGGUUGAUGCUUAAUCAGACAUACACAAUAUAUAUGUUGGUAUGUCUGUUUCAUAUAUGUAUGUAUGCCUAUUCUAAUAUAUAAAUAUAUGUAUAUCAACGUGCUUUUAUUUAUAAAUAUACAGUGUAUAUAUUUAUACAUAUACAUGAAUAUAUAUAUAAAAUAGGCAGGCCAGGUGGGGUGGCUCACAUCUGUUAUCUCAGCACUUUGGGAGACCAAAGUGGGUGGAUCACCUGAGGUCAGGAGUUUGAGACCAGCCUGACCAACAUGGAGAAACCCCAUCUCUACUAAAAAUACAAAAUUAGCCAGGCAUGGUGGCGCAUGCCUGUAAACCCAGCUACUCGGGAGGCUGAGGCAGGAGAAUUGCUUGAACCCAGGAGGCGGAGGUUGCGGUGAGCCGAGAUCCUGGGCAACAAGAACGAGAUUCUGUCUCAAAAAAAAAAAAAAAAAAAAAAAA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	447	467	506	546	1107	1125
Modification Positions	Y	Y	Y	m6A	m6A	Y
Genomic Coordinates	11:62728558:+	11:62728578:+	11:62728617:+	11:62728657:+	11:62735517:+	11:62735535:+
Level of Experimental Evidence	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H nGifePrmgHfe QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 93arJtwJmuS9 Lny8GcCeVGc9 BtsJQJ3DteUq Yfn77uLS5tv8	8cMbzB4aD5Se KTLz8piFYdwC WiQcrNTGZHPT BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP iezFbUdmY3A6 JkWoGWVwjNda Yfn77uLS5tv8