Modomics - A Database of RNA Modifications

General Data

RNA Type mRNA
Original Source Sci-ModoM
Transcript ID: ENST00000349767
Gene ID: ENSG00000171631
Gene Name: P2RY6
Sequence (UNICHARACTER ENCODING) UCUGGGUUCCAGGGACGCUGGGGCCGGAGCUGCUGCCGCCGUCUACACGGUCCCCUCAUUUGACGGGUUCGCCUCCUAGCAGCGCCUGGGCGAGUGACAUCUGGGCCGGACCAGCUGGUGCUGCGCGGCGCAGGUCUCUCGGUUUCCUCAUCUGCUGCCUCUCCAGACUUCUGCCAGAACAUUGCACGCGACAGUUUCAGGCACAGAACUGACUGGCAGCAGGGGCUGCUCCACGAGUGGGAAUUUGCUCCAGCACUUCACGGACUGCAAGCGAGGCACUUGCUAACUCUUGGAUAACAAGACCUCUGCCAGAAGAACCAUGGCUUUGGAAGGCGGAGUUCAGGCUGAGGAGAUGGGUGCGGUCCUCAGUGAGCCCCUGCCUCCCUGAACAUAGGAAACCCACCUGGGCAGCCAUGGAAUGGGЖCAAUGGCACAGGCCAGGCUCUGGGCUUGCCACCCACCACCUGUGUCUACCGCGAGAACUUCAAGCAACUGCUGCUGCCACCUGUGUAUUCGGCGGUGCUGGCGGCUGGCCUGCCGCUGAACAUCUGUGUCAUUACCCAGAUCUGCACGUCCCGCCGGGCCCUGACCCGCACGGCCGUGUACACCCUAAACCUUGCUCUGGCUGACCUGCUAUAUGCCUGCUCCCUGCCCCUGCUCAUCUACAACUAUGCCCAAGGUGAUCACUGGCCCUUUGGCGACUUCGCCUGCCGCCUGGUCCGCUUCCUCUUCUAUGCCAACCUGCACGGCAGCAUCCUCUUCCUCACCUGCAUCAGCUUCCAGCGCUACCUGGGCAUCUGCCACCCGCUGGCCCCCUGGCACAAACGUGGGGGCCGCCGGGCUGCCUGGCUAGUGUGUGUAGCCGUGUGGCUGGCCGUGACAACCCAGUGCCUGCCCACAGCCAUCUUCGCUGCCACAGGCAUCCAGCGUAACCGCACUGUCUGCUAUGACCUCAGCCCGCCUGCCCUGGCCACCCACUAUAUGCCCUAUGGCAUGGCUCUCACUGUCAUCGGCUUCCUGCUGCCCUUUGCUGCCCUGCUGGCCUGCUACUGUCUCCUGGCCUGCCGCCUGUGCCGCCAGGAUGGCCCGGCAGAGCCUGUGGCCCAGGAGCGGCGUGGCAAGGCGGCCCGCAUGGCCGUGGUGGUGGCUGCUGCCUUUGCCAUCAGCUUCCUGCCUUUUCACAUCACCAAGACAGCCUACCUGGCAGUGCGCUCGACGCCGGGCGUCCCCUGCACUGUAUUGGAGGCCUUUGCAGCGGCCUACAAAGGCACGCGGCCGUUUGCCAGUGCCAACAGCGUGCUGGЖCCCCAPCCUCUUCUACUUCACCCAGAAGAAGUUCCGCCGGCGACCACAUGAGCUCCUACЖGAAЖCUCACAGCCAAAUGGCAGAGGCAGGGUCGCUGAGUCCUCCAGGUCCUGGGCAGCCUUCAUAUUUGCCAUUGUGUCCGGGGCACCAGGAGCCCCACCAACCCCAAACCAUGCGGAGAAUUAGAGUUCAGCUCAGCUGGGCAUGGAGUUAAGAUCCCUCACAGGЖCCCAGAAGCUCACCAAAAЖCUAUUUCUUCAGCCCCUUCUCUGGCCCAGACCCUGUGGGCAUGGAGAUGGЖCAGACCUGGGCCUGGCUCUUGAGAGGUCCCAGUCAGCCAUGGAGAGCUGGGGAAACCACAUUAAGGUGCUCACAAAAAUACAGUGUGACGUGUЖCUGUCA
Sequence (SHORT NAMES ENCODING) UCUGGGUUCCAGGGACGCUGGGGCCGGAGCUGCUGCCGCCGUCUACACGGUCCCCUCAUUUGACGGGUUCGCCUCCUAGCAGCGCCUGGGCGAGUGACAUCUGGGCCGGACCAGCUGGUGCUGCGCGGCGCAGGUCUCUCGGUUUCCUCAUCUGCUGCCUCUCCAGACUUCUGCCAGAACAUUGCACGCGACAGUUUCAGGCACAGAACUGACUGGCAGCAGGGGCUGCUCCACGAGUGGGAAUUUGCUCCAGCACUUCACGGACUGCAAGCGAGGCACUUGCUAACUCUUGGAUAACAAGACCUCUGCCAGAAGAACCAUGGCUUUGGAAGGCGGAGUUCAGGCUGAGGAGAUGGGUGCGGUCCUCAGUGAGCCCCUGCCUCCCUGAACAUAGGAAACCCACCUGGGCAGCCAUGGAAUGGGm6ACAAUGGCACAGGCCAGGCUCUGGGCUUGCCACCCACCACCUGUGUCUACCGCGAGAACUUCAAGCAACUGCUGCUGCCACCUGUGUAUUCGGCGGUGCUGGCGGCUGGCCUGCCGCUGAACAUCUGUGUCAUUACCCAGAUCUGCACGUCCCGCCGGGCCCUGACCCGCACGGCCGUGUACACCCUAAACCUUGCUCUGGCUGACCUGCUAUAUGCCUGCUCCCUGCCCCUGCUCAUCUACAACUAUGCCCAAGGUGAUCACUGGCCCUUUGGCGACUUCGCCUGCCGCCUGGUCCGCUUCCUCUUCUAUGCCAACCUGCACGGCAGCAUCCUCUUCCUCACCUGCAUCAGCUUCCAGCGCUACCUGGGCAUCUGCCACCCGCUGGCCCCCUGGCACAAACGUGGGGGCCGCCGGGCUGCCUGGCUAGUGUGUGUAGCCGUGUGGCUGGCCGUGACAACCCAGUGCCUGCCCACAGCCAUCUUCGCUGCCACAGGCAUCCAGCGUAACCGCACUGUCUGCUAUGACCUCAGCCCGCCUGCCCUGGCCACCCACUAUAUGCCCUAUGGCAUGGCUCUCACUGUCAUCGGCUUCCUGCUGCCCUUUGCUGCCCUGCUGGCCUGCUACUGUCUCCUGGCCUGCCGCCUGUGCCGCCAGGAUGGCCCGGCAGAGCCUGUGGCCCAGGAGCGGCGUGGCAAGGCGGCCCGCAUGGCCGUGGUGGUGGCUGCUGCCUUUGCCAUCAGCUUCCUGCCUUUUCACAUCACCAAGACAGCCUACCUGGCAGUGCGCUCGACGCCGGGCGUCCCCUGCACUGUAUUGGAGGCCUUUGCAGCGGCCUACAAAGGCACGCGGCCGUUUGCCAGUGCCAACAGCGUGCUGGm6ACCCCAYCCUCUUCUACUUCACCCAGAAGAAGUUCCGCCGGCGACCACAUGAGCUCCUACm6AGAAm6ACUCACAGCCAAAUGGCAGAGGCAGGGUCGCUGAGUCCUCCAGGUCCUGGGCAGCCUUCAUAUUUGCCAUUGUGUCCGGGGCACCAGGAGCCCCACCAACCCCAAACCAUGCGGAGAAUUAGAGUUCAGCUCAGCUGGGCAUGGAGUUAAGAUCCCUCACAGGm6ACCCAGAAGCUCACCAAAAm6ACUAUUUCUUCAGCCCCUUCUCUGGCCCAGACCCUGUGGGCAUGGAGAUGGm6ACAGACCUGGGCCUGGCUCUUGAGAGGUCCCAGUCAGCCAUGGAGAGCUGGGGAAACCACAUUAAGGUGCUCACAAAAAUACAGUGUGACGUGUm6ACUGUCA
Sequence (MODOMICS CODE ENCODING) UCUGGGUUCCAGGGACGCUGGGGCCGGAGCUGCUGCCGCCGUCUACACGGUCCCCUCAUUUGACGGGUUCGCCUCCUAGCAGCGCCUGGGCGAGUGACAUCUGGGCCGGACCAGCUGGUGCUGCGCGGCGCAGGUCUCUCGGUUUCCUCAUCUGCUGCCUCUCCAGACUUCUGCCAGAACAUUGCACGCGACAGUUUCAGGCACAGAACUGACUGGCAGCAGGGGCUGCUCCACGAGUGGGAAUUUGCUCCAGCACUUCACGGACUGCAAGCGAGGCACUUGCUAACUCUUGGAUAACAAGACCUCUGCCAGAAGAACCAUGGCUUUGGAAGGCGGAGUUCAGGCUGAGGAGAUGGGUGCGGUCCUCAGUGAGCCCCUGCCUCCCUGAACAUAGGAAACCCACCUGGGCAGCCAUGGAAUGGG2000000006ACAAUGGCACAGGCCAGGCUCUGGGCUUGCCACCCACCACCUGUGUCUACCGCGAGAACUUCAAGCAACUGCUGCUGCCACCUGUGUAUUCGGCGGUGCUGGCGGCUGGCCUGCCGCUGAACAUCUGUGUCAUUACCCAGAUCUGCACGUCCCGCCGGGCCCUGACCCGCACGGCCGUGUACACCCUAAACCUUGCUCUGGCUGACCUGCUAUAUGCCUGCUCCCUGCCCCUGCUCAUCUACAACUAUGCCCAAGGUGAUCACUGGCCCUUUGGCGACUUCGCCUGCCGCCUGGUCCGCUUCCUCUUCUAUGCCAACCUGCACGGCAGCAUCCUCUUCCUCACCUGCAUCAGCUUCCAGCGCUACCUGGGCAUCUGCCACCCGCUGGCCCCCUGGCACAAACGUGGGGGCCGCCGGGCUGCCUGGCUAGUGUGUGUAGCCGUGUGGCUGGCCGUGACAACCCAGUGCCUGCCCACAGCCAUCUUCGCUGCCACAGGCAUCCAGCGUAACCGCACUGUCUGCUAUGACCUCAGCCCGCCUGCCCUGGCCACCCACUAUAUGCCCUAUGGCAUGGCUCUCACUGUCAUCGGCUUCCUGCUGCCCUUUGCUGCCCUGCUGGCCUGCUACUGUCUCCUGGCCUGCCGCCUGUGCCGCCAGGAUGGCCCGGCAGAGCCUGUGGCCCAGGAGCGGCGUGGCAAGGCGGCCCGCAUGGCCGUGGUGGUGGCUGCUGCCUUUGCCAUCAGCUUCCUGCCUUUUCACAUCACCAAGACAGCCUACCUGGCAGUGCGCUCGACGCCGGGCGUCCCCUGCACUGUAUUGGAGGCCUUUGCAGCGGCCUACAAAGGCACGCGGCCGUUUGCCAGUGCCAACAGCGUGCUGG2000000006ACCCCA2000000009UCCUCUUCUACUUCACCCAGAAGAAGUUCCGCCGGCGACCACAUGAGCUCCUAC2000000006AGAA2000000006ACUCACAGCCAAAUGGCAGAGGCAGGGUCGCUGAGUCCUCCAGGUCCUGGGCAGCCUUCAUAUUUGCCAUUGUGUCCGGGGCACCAGGAGCCCCACCAACCCCAAACCAUGCGGAGAAUUAGAGUUCAGCUCAGCUGGGCAUGGAGUUAAGAUCCCUCACAGG2000000006ACCCAGAAGCUCACCAAAA2000000006ACUAUUUCUUCAGCCCCUUCUCUGGCCCAGACCCUGUGGGCAUGGAGAUGG2000000006ACAGACCUGGGCCUGGCUCUUGAGAGGUCCCAGUCAGCCAUGGAGAGCUGGGGAAACCACAUUAAGGUGCUCACAAAAAUACAGUGUGACGUGU2000000006ACUGUCA

Score Table

Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.
Method Classification Score
Multiple direct experimental evidence 1
Direct experimental evidence 2
Inferred based on indirect experimental evidence 3
Predicted computationally 4
Evidence not yet annotated (Unknown) 5
Irrelevant 6

Modification Positions

Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.

Position in the Sequence 424 1303 1309 1363 1367 1530 1549 1600 1694
Modification Positions m6A m6A Y m6A m6A m6A m6A m6A m6A
Genomic Coordinates 11:73296529:+ 11:73297408:+ 11:73297414:+ 11:73297468:+ 11:73297472:+ 11:73297635:+ 11:73297654:+ 11:73297705:+ 11:73297799:+
Level of Experimental Evidence 3 3 3 3 3 3 3 3 3
Level of Experimental Reliability 3 3 3 3 3 3 3 3 3
Source Sci-ModoM Sci-ModoM Sci-ModoM Sci-ModoM Sci-ModoM Sci-ModoM Sci-ModoM Sci-ModoM Sci-ModoM
EUFIDs 3TeAZFYFxgvp
6AyXsheySjfx
6UuHp6YApVKv
aivdrAsbdKEU
Ap2q43bQLNek
gZuvgwMuBfgh
jNkxUQNx8GRd
nGifePrmgHfe
NjZ8bGGJsNSR
Q36pf44ZRvxu
QmcpiJ88DBDn
QpiKdbVikVz2
UN3tNpbCPHYf
V5PvfiKsgFMd
VL7zkHvkfkoB
WdHxkJGRmFxn
dknfVe6BK8aP
3TeAZFYFxgvp
5FhTyQVy2tKW
6AyXsheySjfx
6UuHp6YApVKv
aivdrAsbdKEU
Ap2q43bQLNek
gZuvgwMuBfgh
jNkxUQNx8GRd
KRfQJWH4K5KH
nGifePrmgHfe
NjZ8bGGJsNSR
Q36pf44ZRvxu
QmcpiJ88DBDn
QpiKdbVikVz2
UN3tNpbCPHYf
V5PvfiKsgFMd
VL7zkHvkfkoB
WdHxkJGRmFxn
dknfVe6BK8aP
Mk6ShCGm6RBJ
dknfVe6BK8aP
Mk6ShCGm6RBJ
3kRDPWwiRCgi
L6w2k2VEv4EY
3TeAZFYFxgvp
5FhTyQVy2tKW
6AyXsheySjfx
6UuHp6YApVKv
aivdrAsbdKEU
Ap2q43bQLNek
gZuvgwMuBfgh
jNkxUQNx8GRd
KRfQJWH4K5KH
nGifePrmgHfe
NjZ8bGGJsNSR
Q36pf44ZRvxu
QmcpiJ88DBDn
QpiKdbVikVz2
UN3tNpbCPHYf
V5PvfiKsgFMd
VL7zkHvkfkoB
WdHxkJGRmFxn
dknfVe6BK8aP
Mk6ShCGm6RBJ
3TeAZFYFxgvp
5FhTyQVy2tKW
6AyXsheySjfx
6UuHp6YApVKv
aivdrAsbdKEU
Ap2q43bQLNek
gZuvgwMuBfgh
jNkxUQNx8GRd
KRfQJWH4K5KH
nGifePrmgHfe
NjZ8bGGJsNSR
Q36pf44ZRvxu
QmcpiJ88DBDn
QpiKdbVikVz2
UN3tNpbCPHYf
V5PvfiKsgFMd
VL7zkHvkfkoB
WdHxkJGRmFxn
dknfVe6BK8aP
Mk6ShCGm6RBJ
3TeAZFYFxgvp
5FhTyQVy2tKW
6AyXsheySjfx
6UuHp6YApVKv
aivdrAsbdKEU
Ap2q43bQLNek
gZuvgwMuBfgh
jNkxUQNx8GRd
KRfQJWH4K5KH
nGifePrmgHfe
NjZ8bGGJsNSR
Q36pf44ZRvxu
QmcpiJ88DBDn
QpiKdbVikVz2
UN3tNpbCPHYf
V5PvfiKsgFMd
VL7zkHvkfkoB
WdHxkJGRmFxn
dknfVe6BK8aP
Mk6ShCGm6RBJ
3TeAZFYFxgvp
5FhTyQVy2tKW
6AyXsheySjfx
6UuHp6YApVKv
aivdrAsbdKEU
Ap2q43bQLNek
gZuvgwMuBfgh
jNkxUQNx8GRd
KRfQJWH4K5KH
nGifePrmgHfe
NjZ8bGGJsNSR
Q36pf44ZRvxu
QmcpiJ88DBDn
QpiKdbVikVz2
UN3tNpbCPHYf
V5PvfiKsgFMd
VL7zkHvkfkoB
WdHxkJGRmFxn
CxQaH6qDB9bC
dknfVe6BK8aP
Mk6ShCGm6RBJ
3TeAZFYFxgvp
6AyXsheySjfx
6UuHp6YApVKv
Ap2q43bQLNek
jNkxUQNx8GRd
nGifePrmgHfe
NjZ8bGGJsNSR
Q36pf44ZRvxu
UN3tNpbCPHYf
VL7zkHvkfkoB
WdHxkJGRmFxn