General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000398955
Gene ID:	ENSG00000137463
Gene Name:	MGARP
Sequence (UNICHARACTER ENCODING)	AGCCUCUCUGUGGAAGGGCAGCCUGCGCCUGGGUACCGAGGCUGCUGCGCGGCGGACAGCGGGCGCGAUGUAUCUCCGCAGGGCGGUCUCCAAGACUCUGGCGCUGCCGCUGAGGGCGCCCCCCAACCCCGCGCCGCUCGGAAAGGACGCAUCUCUGCGCCGGAUGUCAUCUAACAGAUUCCCUGGAUCAUCUGGAUCAAAUAUGAUUUAUUAUCUGGUUGUAGGCGUCACAGUCAGUGCUGGUGGAUAUUAUGCUUACAAGACAGUCACAUCAGACCAAGCCAAACACACAGAACAUAAAACAAAUUUGAAAGAAAAAACAAAAGCAGAGAUACAPCCAUUUCAAGGUGAAAAGGAGAAUGUUGCGGAAACUGAGAAAGCAAGUUCAGAAGCCCCAGAAGAACUUAUAGUGGAAGCUGAGGUGGUAGAUGCUGAAGAAAGUCCCAGUGCUACAGUUGUGGUCAUAAAAGAGGCAUCUGCCUGUCCAGGUCACGUGGAGGCUGCUCCGGAGЖCCACAGCAGUCAGUGCUGAAACCGGGCCAGAGGUCACAGAUGCAGCGGCGAGGGAAACCACGGAAGUAAACCCUGAAACAACCCCAGAGGUUACAAAUGCUGCCCUGGAUGAAGCUGUCACCAUCGAUAAUGAUAAAGAUACAACAAAGAACGAAACCUCUGAUGAAUAUGCUGAЖCUAGAAGAAGAAAAUUCUCCAGCUGAGUCAGAGUCCUCUGCUGGAGAUGAUUUACAGGAGGAAGCCAGUGUUGGCUCUGAGGCUGCUUCGGCUCAAGGCUAAUCUCCAGCCGGUAGЖCAUUUCAGCAACAAAUGCCAUAGGGUGUCUGAUAAGUGCUUUUGUGUUUUUAGUACACUUAGUUUAAAAAAAAAAAGЖCUUAUUUUCUAGAAAACGUUAAUGGGUCUUGAAGAUUUUUGGCAUCCACUGAUAGAUUUUAGGЖCUGAGAGЖCUUGAGAUUGUACAUUUCUUACUACUCUUCUACUGUCUGAGAUCAGAAUAUGACAUUGCAGUAAAGAGCUUAAAUAGUUUCAUCUUUGGUUUUUUUUUCUAGACACUUUUCUUUUAUCCCAGUCAUCUCUGAAUUUACAUUUUAUAUUAAAGAAAUUGAGCUAUCCAUACAACCUGUAUUUACUPUAAUUUCACUAUGCUUUCAGCUUACUPUAUUGUAUGAUAUGUAGGUCUAAAAUAUAGUUUGAGUCAAAUAAAAUUAGAAAAGCU
Sequence (SHORT NAMES ENCODING)	AGCCUCUCUGUGGAAGGGCAGCCUGCGCCUGGGUACCGAGGCUGCUGCGCGGCGGACAGCGGGCGCGAUGUAUCUCCGCAGGGCGGUCUCCAAGACUCUGGCGCUGCCGCUGAGGGCGCCCCCCAACCCCGCGCCGCUCGGAAAGGACGCAUCUCUGCGCCGGAUGUCAUCUAACAGAUUCCCUGGAUCAUCUGGAUCAAAUAUGAUUUAUUAUCUGGUUGUAGGCGUCACAGUCAGUGCUGGUGGAUAUUAUGCUUACAAGACAGUCACAUCAGACCAAGCCAAACACACAGAACAUAAAACAAAUUUGAAAGAAAAAACAAAAGCAGAGAUACAYCCAUUUCAAGGUGAAAAGGAGAAUGUUGCGGAAACUGAGAAAGCAAGUUCAGAAGCCCCAGAAGAACUUAUAGUGGAAGCUGAGGUGGUAGAUGCUGAAGAAAGUCCCAGUGCUACAGUUGUGGUCAUAAAAGAGGCAUCUGCCUGUCCAGGUCACGUGGAGGCUGCUCCGGAGm6ACCACAGCAGUCAGUGCUGAAACCGGGCCAGAGGUCACAGAUGCAGCGGCGAGGGAAACCACGGAAGUAAACCCUGAAACAACCCCAGAGGUUACAAAUGCUGCCCUGGAUGAAGCUGUCACCAUCGAUAAUGAUAAAGAUACAACAAAGAACGAAACCUCUGAUGAAUAUGCUGAm6ACUAGAAGAAGAAAAUUCUCCAGCUGAGUCAGAGUCCUCUGCUGGAGAUGAUUUACAGGAGGAAGCCAGUGUUGGCUCUGAGGCUGCUUCGGCUCAAGGCUAAUCUCCAGCCGGUAGm6ACAUUUCAGCAACAAAUGCCAUAGGGUGUCUGAUAAGUGCUUUUGUGUUUUUAGUACACUUAGUUUAAAAAAAAAAAGm6ACUUAUUUUCUAGAAAACGUUAAUGGGUCUUGAAGAUUUUUGGCAUCCACUGAUAGAUUUUAGGm6ACUGAGAGm6ACUUGAGAUUGUACAUUUCUUACUACUCUUCUACUGUCUGAGAUCAGAAUAUGACAUUGCAGUAAAGAGCUUAAAUAGUUUCAUCUUUGGUUUUUUUUUCUAGACACUUUUCUUUUAUCCCAGUCAUCUCUGAAUUUACAUUUUAUAUUAAAGAAAUUGAGCUAUCCAUACAACCUGUAUUUACUYUAAUUUCACUAUGCUUUCAGCUUACUYUAUUGUAUGAUAUGUAGGUCUAAAAUAUAGUUUGAGUCAAAUAAAAUUAGAAAAGCU
Sequence (MODOMICS CODE ENCODING)	AGCCUCUCUGUGGAAGGGCAGCCUGCGCCUGGGUACCGAGGCUGCUGCGCGGCGGACAGCGGGCGCGAUGUAUCUCCGCAGGGCGGUCUCCAAGACUCUGGCGCUGCCGCUGAGGGCGCCCCCCAACCCCGCGCCGCUCGGAAAGGACGCAUCUCUGCGCCGGAUGUCAUCUAACAGAUUCCCUGGAUCAUCUGGAUCAAAUAUGAUUUAUUAUCUGGUUGUAGGCGUCACAGUCAGUGCUGGUGGAUAUUAUGCUUACAAGACAGUCACAUCAGACCAAGCCAAACACACAGAACAUAAAACAAAUUUGAAAGAAAAAACAAAAGCAGAGAUACA2000000009UCCAUUUCAAGGUGAAAAGGAGAAUGUUGCGGAAACUGAGAAAGCAAGUUCAGAAGCCCCAGAAGAACUUAUAGUGGAAGCUGAGGUGGUAGAUGCUGAAGAAAGUCCCAGUGCUACAGUUGUGGUCAUAAAAGAGGCAUCUGCCUGUCCAGGUCACGUGGAGGCUGCUCCGGAG2000000006ACCACAGCAGUCAGUGCUGAAACCGGGCCAGAGGUCACAGAUGCAGCGGCGAGGGAAACCACGGAAGUAAACCCUGAAACAACCCCAGAGGUUACAAAUGCUGCCCUGGAUGAAGCUGUCACCAUCGAUAAUGAUAAAGAUACAACAAAGAACGAAACCUCUGAUGAAUAUGCUGA2000000006ACUAGAAGAAGAAAAUUCUCCAGCUGAGUCAGAGUCCUCUGCUGGAGAUGAUUUACAGGAGGAAGCCAGUGUUGGCUCUGAGGCUGCUUCGGCUCAAGGCUAAUCUCCAGCCGGUAG2000000006ACAUUUCAGCAACAAAUGCCAUAGGGUGUCUGAUAAGUGCUUUUGUGUUUUUAGUACACUUAGUUUAAAAAAAAAAAG2000000006ACUUAUUUUCUAGAAAACGUUAAUGGGUCUUGAAGAUUUUUGGCAUCCACUGAUAGAUUUUAGG2000000006ACUGAGAG2000000006ACUUGAGAUUGUACAUUUCUUACUACUCUUCUACUGUCUGAGAUCAGAAUAUGACAUUGCAGUAAAGAGCUUAAAUAGUUUCAUCUUUGGUUUUUUUUUCUAGACACUUUUCUUUUAUCCCAGUCAUCUCUGAAUUUACAUUUUAUAUUAAAGAAAUUGAGCUAUCCAUACAACCUGUAUUUACU2000000009UUAAUUUCACUAUGCUUUCAGCUUACU2000000009UUAUUGUAUGAUAUGUAGGUCUAAAAUAUAGUUUGAGUCAAAUAAAAUUAGAAAAGCU

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	337	512	688	805	883	947	955	1140	1167
Modification Positions	Y	m6A	m6A	m6A	m6A	m6A	m6A	Y	Y
Genomic Coordinates	4:139268682:-	4:139266877:-	4:139266701:-	4:139266584:-	4:139266506:-	4:139266442:-	4:139266434:-	4:139266249:-	4:139266222:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq XWZVGdLC6gGJ Yfn77uLS5tv8	BtsJQJ3DteUq XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	msuJfBpJvM5H VyCX26p5UBRL BtsJQJ3DteUq XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	msuJfBpJvM5H VyCX26p5UBRL BtsJQJ3DteUq XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	4HMi5ykupT9V 5aTkEfEpX8Xm msuJfBpJvM5H VyCX26p5UBRL BkoLW2CBToyL BtsJQJ3DteUq XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	4HMi5ykupT9V 5aTkEfEpX8Xm msuJfBpJvM5H VyCX26p5UBRL BtsJQJ3DteUq XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8