General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000523916
Gene ID:	ENSG00000164305
Gene Name:	CASP3
Sequence (UNICHARACTER ENCODING)	AGGGGCGGGCGGGAGGCGGGGCUGGCGCUGGAGCACAUCUCCCGGCGGCGGGCCGCGGAAGCAGUGCAGACGCGGCUCCUAGCGGAUGGGUGCUAUUGUGAGGCGGUUGUAGAAGUUAAUAAAGGUAUCCAUGGAGAACACUGAAAACUCAGUGGAUUCAAAAUCCAUUAAAAAUUUGGAACCAAAGAUCAUACAUGGAAGCGAAUCAAUGGACUCUGGAAUAUCCCUGGACAACAGUUAUAAAAUGGAUUAUCCUGAGAUGGGUUUAUGUAUAAUAAUUAAUAAUAAGAAUUUUCAUAAAAGCACUGGAAUGACAUCUCGGUCUGGUACAGAUGUCGAUGCAGCAAACCUCAGGGAAACAUUCAGAAACUUGAAAUAUGAAGUCAGGAAUAAAAAUGAUCUUACACGUGAAGAAAUUGUGGAAUUGAUGCGUGAUGUUUCUAAAGAAGAUCACAGCAAAAGGAGCAGUUUUGUUUGUGUGCUUCUGAGCCAUGGUGAAGAAGGAAUAAUUUUUGGAACAAAUGGACCUGUUGACCUGAAAAAAAUAACAAACUUUUUCAGAGGGGAUCGUUGUAGAAGUCUAACUGGAAAACCCAAACUUUUCAUUAUUCAGGCCUGCCGUGGUACAGAACUGGACUGUGGCAUUGAGACAGACAGUGGUGUUGAUGAUGACAUGGCGUGUCAUAAAAUACCAGUGGAGGCCGACUUCUUGUAUGCAUACUCCACAGCACCUGGUUAUUAUUCUUGGCGAAAUUCAAAGGAUGGCUCCUGGUUCAPCCAGUCGCUUUGUGCCAUGCUGAAACAGUAUGCCGACAAGCUUGAAUUUAUGCACAUUCUUACCCGGGUUAЖCCGAAAGGUGGCAACAGAAUUUGAGUCCUUUUCCUUUGACGCUACUUUUCAUGCAAAGAAACAGAUUCCAUGUAUUGUUUCCAUGCUCACAAAAGAЖCUCUAUUUUUAUCACUAAAGAAAUGGUUGGUUGGUGGUUUUUUUUAGUUUGUAUGCCAAGUGAGAAGAUGGUAUAUUUGGUACUGUAUUUCCCUCUCAUUUUGACCUACUCUCAUGCUGCAGAGGGUACUPUAAGЖCAUACUCCUUCCAUCAAAUAGAACCACUAUGAAGCUACCUCAAACUUCCAGUCAGGUAGUUGCAAUUGAAUUAAAUUAGGAAUAAAUAAAAAUGGAUACUGGUGCAGUCAUUAUGAGAGGCAAUGAUUGUUAAUUUACAGCUUUCAUGAUUAGCAAGUUACAGUGAUGCUGUGCUAUGAAUUUUCAAGUAAUUGUGAAAAAGUUAAЖCAUUGAAGUAAUGAAUUUUUAUGAUAUUCCCCCCACUUAAGЖCUGUGUAUUCUAGUUUUGUCAAACUGUAGAAAUGAUGAUGUGGAAGAACUUAGGCAUCUGUGGGCAUGGUCAAAGGCUCAAACCUPUAUUUUAGAAUUGAUAUACACGGAUGACUUAЖCUGCAUUUUUAGACCAUUUAUCUGGGAUUAUGGUUUUGUGAUGUUUGUCCUGAACACUUUUGUUGUAAAAAAAUAAUAAUAAUGUUUAAUAUUGAGAAAGAAACUAAUAUUUUAUGUGAGAGAAAGUGUGAGCAAACUAЖCUUGACUUUUAAGGCUAAAACUUAЖCAUUCAUAGAGGGGUGGAGUUUUAACUGUAAGGUGCUACAAUGCCCCUGGAUCUACCAGCAUAAAUAUCUUCUGAUUUGUCCCUAUGCAUAUCAGUUGAGCUUCAUAUACCAGCAAUAUAUCUGAAGAGCUAUUAUAUAAAAACCCCAAACUGUUGAUUAUUAGCCAGGUAAUGUGAAUAAAUUCUAUAGGAACAUAUGAAAAUACAACUUAAAUAAUAAЖCAGUGGAAUAUAAGGAAAGCAAUAAAUGAAUGGGCUGAGCUGCCUGUAACUUGAGAGUAGAUGGUUUGAGCCUGAGCAGAGACAUGACUCAGCCUGUUCCAUGAAGGCAGAGCCAUGGACCACGCAGGAAGGGCCUACAGCCCAUUUCUCCAUACGCACUGGUAUGUGUGGAUGAUGCUGCCAGGGCGCCAUCGCCAAGUAAGAAAGUGAAGCAAAUCAGAAACUUGUGAAGUGGAAAUGUUCUAAAGGUGGUGAGGCAAUAAAAAUCAUAGUACUCUUUGUAGCAAAAUUCUUAAGUAUGUUAUUUUCUGUUGAAGUUUACAAUCAAAGGAAAAUAGUAAUGUUUUAUACUGUUUACUGAAAGAAAAAGACCUAUGAGCACAUAGGACUCUAGACGGCAPCCAGCCGGAGGCCAGAGCUGAGCCCUCAGCCCGGGAGGCAGGCUCCAGGCCUCAGCAGGUGCGGAGCCGUCACUGCACCAAGUCUCACUGGCUGUCAGUAUGACAUUUCACGGGAGAUUUCUUGUUGCUCAAAAAAUGAGCUCGCAUUUGUCAAUGACAGUUUCUUUUUUCUUACUAGЖCCUGUAЖCUUUUGUAAAUACACAUAGCAUGUAAUGGUAUCUUAAAGUGUGUUUCUAUGUGACAAUUUUGUACAAAUUUGUUAUUUUCCAUUUUUAUUUCAAAAUAUACAUUCAAACUUAAAAUUA
Sequence (SHORT NAMES ENCODING)	AGGGGCGGGCGGGAGGCGGGGCUGGCGCUGGAGCACAUCUCCCGGCGGCGGGCCGCGGAAGCAGUGCAGACGCGGCUCCUAGCGGAUGGGUGCUAUUGUGAGGCGGUUGUAGAAGUUAAUAAAGGUAUCCAUGGAGAACACUGAAAACUCAGUGGAUUCAAAAUCCAUUAAAAAUUUGGAACCAAAGAUCAUACAUGGAAGCGAAUCAAUGGACUCUGGAAUAUCCCUGGACAACAGUUAUAAAAUGGAUUAUCCUGAGAUGGGUUUAUGUAUAAUAAUUAAUAAUAAGAAUUUUCAUAAAAGCACUGGAAUGACAUCUCGGUCUGGUACAGAUGUCGAUGCAGCAAACCUCAGGGAAACAUUCAGAAACUUGAAAUAUGAAGUCAGGAAUAAAAAUGAUCUUACACGUGAAGAAAUUGUGGAAUUGAUGCGUGAUGUUUCUAAAGAAGAUCACAGCAAAAGGAGCAGUUUUGUUUGUGUGCUUCUGAGCCAUGGUGAAGAAGGAAUAAUUUUUGGAACAAAUGGACCUGUUGACCUGAAAAAAAUAACAAACUUUUUCAGAGGGGAUCGUUGUAGAAGUCUAACUGGAAAACCCAAACUUUUCAUUAUUCAGGCCUGCCGUGGUACAGAACUGGACUGUGGCAUUGAGACAGACAGUGGUGUUGAUGAUGACAUGGCGUGUCAUAAAAUACCAGUGGAGGCCGACUUCUUGUAUGCAUACUCCACAGCACCUGGUUAUUAUUCUUGGCGAAAUUCAAAGGAUGGCUCCUGGUUCAYCCAGUCGCUUUGUGCCAUGCUGAAACAGUAUGCCGACAAGCUUGAAUUUAUGCACAUUCUUACCCGGGUUAm6ACCGAAAGGUGGCAACAGAAUUUGAGUCCUUUUCCUUUGACGCUACUUUUCAUGCAAAGAAACAGAUUCCAUGUAUUGUUUCCAUGCUCACAAAAGAm6ACUCUAUUUUUAUCACUAAAGAAAUGGUUGGUUGGUGGUUUUUUUUAGUUUGUAUGCCAAGUGAGAAGAUGGUAUAUUUGGUACUGUAUUUCCCUCUCAUUUUGACCUACUCUCAUGCUGCAGAGGGUACUYUAAGm6ACAUACUCCUUCCAUCAAAUAGAACCACUAUGAAGCUACCUCAAACUUCCAGUCAGGUAGUUGCAAUUGAAUUAAAUUAGGAAUAAAUAAAAAUGGAUACUGGUGCAGUCAUUAUGAGAGGCAAUGAUUGUUAAUUUACAGCUUUCAUGAUUAGCAAGUUACAGUGAUGCUGUGCUAUGAAUUUUCAAGUAAUUGUGAAAAAGUUAAm6ACAUUGAAGUAAUGAAUUUUUAUGAUAUUCCCCCCACUUAAGm6ACUGUGUAUUCUAGUUUUGUCAAACUGUAGAAAUGAUGAUGUGGAAGAACUUAGGCAUCUGUGGGCAUGGUCAAAGGCUCAAACCUYUAUUUUAGAAUUGAUAUACACGGAUGACUUAm6ACUGCAUUUUUAGACCAUUUAUCUGGGAUUAUGGUUUUGUGAUGUUUGUCCUGAACACUUUUGUUGUAAAAAAAUAAUAAUAAUGUUUAAUAUUGAGAAAGAAACUAAUAUUUUAUGUGAGAGAAAGUGUGAGCAAACUAm6ACUUGACUUUUAAGGCUAAAACUUAm6ACAUUCAUAGAGGGGUGGAGUUUUAACUGUAAGGUGCUACAAUGCCCCUGGAUCUACCAGCAUAAAUAUCUUCUGAUUUGUCCCUAUGCAUAUCAGUUGAGCUUCAUAUACCAGCAAUAUAUCUGAAGAGCUAUUAUAUAAAAACCCCAAACUGUUGAUUAUUAGCCAGGUAAUGUGAAUAAAUUCUAUAGGAACAUAUGAAAAUACAACUUAAAUAAUAAm6ACAGUGGAAUAUAAGGAAAGCAAUAAAUGAAUGGGCUGAGCUGCCUGUAACUUGAGAGUAGAUGGUUUGAGCCUGAGCAGAGACAUGACUCAGCCUGUUCCAUGAAGGCAGAGCCAUGGACCACGCAGGAAGGGCCUACAGCCCAUUUCUCCAUACGCACUGGUAUGUGUGGAUGAUGCUGCCAGGGCGCCAUCGCCAAGUAAGAAAGUGAAGCAAAUCAGAAACUUGUGAAGUGGAAAUGUUCUAAAGGUGGUGAGGCAAUAAAAAUCAUAGUACUCUUUGUAGCAAAAUUCUUAAGUAUGUUAUUUUCUGUUGAAGUUUACAAUCAAAGGAAAAUAGUAAUGUUUUAUACUGUUUACUGAAAGAAAAAGACCUAUGAGCACAUAGGACUCUAGACGGCAYCCAGCCGGAGGCCAGAGCUGAGCCCUCAGCCCGGGAGGCAGGCUCCAGGCCUCAGCAGGUGCGGAGCCGUCACUGCACCAAGUCUCACUGGCUGUCAGUAUGACAUUUCACGGGAGAUUUCUUGUUGCUCAAAAAAUGAGCUCGCAUUUGUCAAUGACAGUUUCUUUUUUCUUACUAGm6ACCUGUAm6ACUUUUGUAAAUACACAUAGCAUGUAAUGGUAUCUUAAAGUGUGUUUCUAUGUGACAAUUUUGUACAAAUUUGUUAUUUUCCAUUUUUAUUUCAAAAUAUACAUUCAAACUUAAAAUUA
Sequence (MODOMICS CODE ENCODING)	AGGGGCGGGCGGGAGGCGGGGCUGGCGCUGGAGCACAUCUCCCGGCGGCGGGCCGCGGAAGCAGUGCAGACGCGGCUCCUAGCGGAUGGGUGCUAUUGUGAGGCGGUUGUAGAAGUUAAUAAAGGUAUCCAUGGAGAACACUGAAAACUCAGUGGAUUCAAAAUCCAUUAAAAAUUUGGAACCAAAGAUCAUACAUGGAAGCGAAUCAAUGGACUCUGGAAUAUCCCUGGACAACAGUUAUAAAAUGGAUUAUCCUGAGAUGGGUUUAUGUAUAAUAAUUAAUAAUAAGAAUUUUCAUAAAAGCACUGGAAUGACAUCUCGGUCUGGUACAGAUGUCGAUGCAGCAAACCUCAGGGAAACAUUCAGAAACUUGAAAUAUGAAGUCAGGAAUAAAAAUGAUCUUACACGUGAAGAAAUUGUGGAAUUGAUGCGUGAUGUUUCUAAAGAAGAUCACAGCAAAAGGAGCAGUUUUGUUUGUGUGCUUCUGAGCCAUGGUGAAGAAGGAAUAAUUUUUGGAACAAAUGGACCUGUUGACCUGAAAAAAAUAACAAACUUUUUCAGAGGGGAUCGUUGUAGAAGUCUAACUGGAAAACCCAAACUUUUCAUUAUUCAGGCCUGCCGUGGUACAGAACUGGACUGUGGCAUUGAGACAGACAGUGGUGUUGAUGAUGACAUGGCGUGUCAUAAAAUACCAGUGGAGGCCGACUUCUUGUAUGCAUACUCCACAGCACCUGGUUAUUAUUCUUGGCGAAAUUCAAAGGAUGGCUCCUGGUUCA2000000009UCCAGUCGCUUUGUGCCAUGCUGAAACAGUAUGCCGACAAGCUUGAAUUUAUGCACAUUCUUACCCGGGUUA2000000006ACCGAAAGGUGGCAACAGAAUUUGAGUCCUUUUCCUUUGACGCUACUUUUCAUGCAAAGAAACAGAUUCCAUGUAUUGUUUCCAUGCUCACAAAAGA2000000006ACUCUAUUUUUAUCACUAAAGAAAUGGUUGGUUGGUGGUUUUUUUUAGUUUGUAUGCCAAGUGAGAAGAUGGUAUAUUUGGUACUGUAUUUCCCUCUCAUUUUGACCUACUCUCAUGCUGCAGAGGGUACU2000000009UUAAG2000000006ACAUACUCCUUCCAUCAAAUAGAACCACUAUGAAGCUACCUCAAACUUCCAGUCAGGUAGUUGCAAUUGAAUUAAAUUAGGAAUAAAUAAAAAUGGAUACUGGUGCAGUCAUUAUGAGAGGCAAUGAUUGUUAAUUUACAGCUUUCAUGAUUAGCAAGUUACAGUGAUGCUGUGCUAUGAAUUUUCAAGUAAUUGUGAAAAAGUUAA2000000006ACAUUGAAGUAAUGAAUUUUUAUGAUAUUCCCCCCACUUAAG2000000006ACUGUGUAUUCUAGUUUUGUCAAACUGUAGAAAUGAUGAUGUGGAAGAACUUAGGCAUCUGUGGGCAUGGUCAAAGGCUCAAACCU2000000009UUAUUUUAGAAUUGAUAUACACGGAUGACUUA2000000006ACUGCAUUUUUAGACCAUUUAUCUGGGAUUAUGGUUUUGUGAUGUUUGUCCUGAACACUUUUGUUGUAAAAAAAUAAUAAUAAUGUUUAAUAUUGAGAAAGAAACUAAUAUUUUAUGUGAGAGAAAGUGUGAGCAAACUA2000000006ACUUGACUUUUAAGGCUAAAACUUA2000000006ACAUUCAUAGAGGGGUGGAGUUUUAACUGUAAGGUGCUACAAUGCCCCUGGAUCUACCAGCAUAAAUAUCUUCUGAUUUGUCCCUAUGCAUAUCAGUUGAGCUUCAUAUACCAGCAAUAUAUCUGAAGAGCUAUUAUAUAAAAACCCCAAACUGUUGAUUAUUAGCCAGGUAAUGUGAAUAAAUUCUAUAGGAACAUAUGAAAAUACAACUUAAAUAAUAA2000000006ACAGUGGAAUAUAAGGAAAGCAAUAAAUGAAUGGGCUGAGCUGCCUGUAACUUGAGAGUAGAUGGUUUGAGCCUGAGCAGAGACAUGACUCAGCCUGUUCCAUGAAGGCAGAGCCAUGGACCACGCAGGAAGGGCCUACAGCCCAUUUCUCCAUACGCACUGGUAUGUGUGGAUGAUGCUGCCAGGGCGCCAUCGCCAAGUAAGAAAGUGAAGCAAAUCAGAAACUUGUGAAGUGGAAAUGUUCUAAAGGUGGUGAGGCAAUAAAAAUCAUAGUACUCUUUGUAGCAAAAUUCUUAAGUAUGUUAUUUUCUGUUGAAGUUUACAAUCAAAGGAAAAUAGUAAUGUUUUAUACUGUUUACUGAAAGAAAAAGACCUAUGAGCACAUAGGACUCUAGACGGCA2000000009UCCAGCCGGAGGCCAGAGCUGAGCCCUCAGCCCGGGAGGCAGGCUCCAGGCCUCAGCAGGUGCGGAGCCGUCACUGCACCAAGUCUCACUGGCUGUCAGUAUGACAUUUCACGGGAGAUUUCUUGUUGCUCAAAAAAUGAGCUCGCAUUUGUCAAUGACAGUUUCUUUUUUCUUACUAG2000000006ACCUGUA2000000006ACUUUUGUAAAUACACAUAGCAUGUAAUGGUAUCUUAAAGUGUGUUUCUAUGUGACAAUUUUGUACAAAUUUGUUAUUUUCCAUUUUUAUUUCAAAAUAUACAUUCAAACUUAAAAUUA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	777	849	946	1077	1082	1289	1331	1417	1449	1589	1614	1835	2236	2415	2422
Modification Positions	Y	m6A	m6A	Y	m6A	m6A	m6A	Y	m6A	m6A	m6A	m6A	Y	m6A	m6A
Genomic Coordinates	4:184629459:-	4:184629387:-	4:184629290:-	4:184629159:-	4:184629154:-	4:184628947:-	4:184628905:-	4:184628819:-	4:184628787:-	4:184628647:-	4:184628622:-	4:184628401:-	4:184628000:-	4:184627821:-	4:184627814:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	4HMi5ykupT9V 8cMbzB4aD5Se ArijeGVTwYBw Lny8GcCeVGc9 UKen6WEino9G BtsJQJ3DteUq iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	8cMbzB4aD5Se ArijeGVTwYBw BkoLW2CBToyL BtsJQJ3DteUq dknfVe6BK8aP XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	8cMbzB4aD5Se ArijeGVTwYBw nfCHyrYzE6fB WiQcrNTGZHPT Lny8GcCeVGc9 LZJKems7W2wi BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP kx7BHU7ZycYE oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	8cMbzB4aD5Se ArijeGVTwYBw KTLz8piFYdwC WiQcrNTGZHPT BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP kx7BHU7ZycYE oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8