General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000264596
Gene ID:	ENSG00000109674
Gene Name:	NEIL3
Sequence (UNICHARACTER ENCODING)	AGUGCCCGCGCAGCGUUGAGUUGCACAGCGGUAUUCUCACCAGGCCCUGCAAUCGGUGGGCCACAGUGCCGGCCACAGAGAUGGUGGAAGGACCAGGCUGUACUCUGAAUGGAGAGAAGAUUCGCGCGCGGGUGCUCCCGGGCCAGGCGGUGACCGGCGUGCGGGGAAGCGCUCUGCGGAGUCUGCAGGGCCGCGCCUUGCGGCUCGCAGCCUCCACGGUUGUGGUCUCCCCGCAGGCUGCUGCACUGAAUAAUGAUUCCAGCCAGAAUGUCUUGAGCCUGUUUAAUGGAUAUGUUUACAGUGGCGUGGAAACUUUGGGGAAGGAGCUCUPUAUGUACUUUGGACCAAAAGCUPUACGGAUUCAUUUCGGAAUGAAAGGCUUCAUCAUGAUUAAUCCACUUGAGUAUAAAUAUAAAAAUGGAGCUUCUCCUGUUUUGGAAGUGCAGCUCACCAAAGAUUUGAUUUGUUUCUUUGACUCAUCAGUAGAACUCAGAAACUCAAUGGAAAGCCAACAGAGAAUAAGAAUGAUGAAAGAAUUAGAUGUAUGUUCACCUGAAUUUAGUUUCUUGAGAGCAGAAAGUGAAGUUAAAAAACAGAAAGGCCGGAUGCUAGGUGAUGUGCUAAUGGAUCAGAACGUAUUGCCUGGAGUAGGGAACAUCAUCAAAAAUGAAGCUCUCUUUGACAGUGGUCUCCACCCAGCUGUUAAAGUUUGUCAAUUAACAGAUGAЖCAGAUCCAUCACCUCAUGAAAAUGAUACGUGAUUUCAGCAUUCUCUUUUACAGGUGCCGUAAAGCAGGACUUGCUCUCUCUAAACACUAUAAGGUUUACAAGCGUCCUAAUUGUGGUCAGUGCCACUGCAGAAUAACUGUGUGCCGCUUUGGGGACAAUAACAGAAUGACAUAUUUCUGUCCUCACUGUCAAAAAGAAAAUCCUCAACAUGUUGACAUAUGCAAGCUACCGACUAGAAAUACUAUAAUCAGUUGGACAUCUAGCAGGGUGGAUCAUGUUAUGGACUCCGUGGCUCGGAAGUCGGAAGAGCACUGGACCUGUGUGGUGUGUACUPUAAUCAAUAAGCCCUCUUCUAAGGCAUGUGAUGCUUGCUUGACCUCAAGGCCUAUUGAUUCAGUGCUCAAGAGUGAAGAAAAUUCUACUGUCUPUAGCCACUUAAUGAAGUACCCGUGUAAUACUUUUGGAAAACCUCAUACAGAAGUCAAGAUCAACAGAAAAACUGCAUUUGGAACUACAACUCUUGUCUUGЖCUGAUUUUAGCAAUAAAUCCAGUACUUUGGAAAGAAAAACAAAGCAAAACCAGAUACUAGAUGAGGAGUUUCAAAACUCUCCUCCUGCUAGUGUUUGUUUGAAUGAUAUACAGCACCCCUCCAAGAAGACAACAAACGAUAUAACUCAACCAUCCAGCAAAGUAAЖCAUAUCACCUACAAUCAGUUCAGAAUCUAAAUUAUUUAGUCCAGCACAUAAAAAACCGAAAACAGCCCAAUACUCAUCACCAGAGCUUAAAAGCUGCAACCCUGGAUAUUCUAACAGUGAACUUCAAAUUAAUAUGACAGAUGGCCCUCGUACCUUAAAUCCUGACAGCCCUCGCUGCAGUAAACACAACCGCCUCUGCAUUCUCCGAGUUGUGGGGAAGGAUGGGGAAAЖCAAGGGCAGGCAGUUUUAUGCCUGUCCUCUACCUAGAGAAGCACAAUGUGGAUUUUUUGAAUGGGCAGAUUUGUCCUUCCCAUUCUGCAACCAUGGCAAGCGUUCCACCAUGAAAACAGUAUUGAAGAUUGGACCUAACAAUGGAAAGAAUUUUUUUGUGUGUCCUCUUGGGAAGGAAAAACAAUGCAAUUUUUUCCAGUGGGCAGAAAAUGGGCCAGGAAUAAAAAUUAUUCCUGGAUGCUAAUAUCUGUAGAUUCUCUGGCAUUUAGUCUCUUCAAЖCUGUGUAUAAUGUUUGGUCCUCCUCUGUUUCAUAGAAAAGUCAUAGAAUAUCUAUGAUACAUUGAAAAGUUACUGCAAUAUUUGAGAЖCUGUUCUUUUUUUUUCUUGUGUGUGCCAUCUUUCCAUUGUUGGCUACGUCUUUUCUUUUGCCUUGAUGAACGUUCUAUGUAUUUCAUCGGAUAUACAGCAUAUUCCAUUUAGGAUGUGUAUUUAAUGCAUUUAGUAAUGACGAUAAAGUGUUUUUAGUAUGCUUUUAGUCUCUUGUAACUGGGGAGAAGCAGUGUUUUUUUUUUAGGAAAGGAUUAUGCGACACAAUAAAAUAAGAUAUUCUGUCUGUAGUGAAUACAUUUCUCAUGUACUAACACUAUUUAUAAUAUAUGAUUAAAGAUAUUUCUUGUUUUAUUAAAUAAUAAGAAAUAAGAUCUCCUUUA
Sequence (SHORT NAMES ENCODING)	AGUGCCCGCGCAGCGUUGAGUUGCACAGCGGUAUUCUCACCAGGCCCUGCAAUCGGUGGGCCACAGUGCCGGCCACAGAGAUGGUGGAAGGACCAGGCUGUACUCUGAAUGGAGAGAAGAUUCGCGCGCGGGUGCUCCCGGGCCAGGCGGUGACCGGCGUGCGGGGAAGCGCUCUGCGGAGUCUGCAGGGCCGCGCCUUGCGGCUCGCAGCCUCCACGGUUGUGGUCUCCCCGCAGGCUGCUGCACUGAAUAAUGAUUCCAGCCAGAAUGUCUUGAGCCUGUUUAAUGGAUAUGUUUACAGUGGCGUGGAAACUUUGGGGAAGGAGCUCUYUAUGUACUUUGGACCAAAAGCUYUACGGAUUCAUUUCGGAAUGAAAGGCUUCAUCAUGAUUAAUCCACUUGAGUAUAAAUAUAAAAAUGGAGCUUCUCCUGUUUUGGAAGUGCAGCUCACCAAAGAUUUGAUUUGUUUCUUUGACUCAUCAGUAGAACUCAGAAACUCAAUGGAAAGCCAACAGAGAAUAAGAAUGAUGAAAGAAUUAGAUGUAUGUUCACCUGAAUUUAGUUUCUUGAGAGCAGAAAGUGAAGUUAAAAAACAGAAAGGCCGGAUGCUAGGUGAUGUGCUAAUGGAUCAGAACGUAUUGCCUGGAGUAGGGAACAUCAUCAAAAAUGAAGCUCUCUUUGACAGUGGUCUCCACCCAGCUGUUAAAGUUUGUCAAUUAACAGAUGAm6ACAGAUCCAUCACCUCAUGAAAAUGAUACGUGAUUUCAGCAUUCUCUUUUACAGGUGCCGUAAAGCAGGACUUGCUCUCUCUAAACACUAUAAGGUUUACAAGCGUCCUAAUUGUGGUCAGUGCCACUGCAGAAUAACUGUGUGCCGCUUUGGGGACAAUAACAGAAUGACAUAUUUCUGUCCUCACUGUCAAAAAGAAAAUCCUCAACAUGUUGACAUAUGCAAGCUACCGACUAGAAAUACUAUAAUCAGUUGGACAUCUAGCAGGGUGGAUCAUGUUAUGGACUCCGUGGCUCGGAAGUCGGAAGAGCACUGGACCUGUGUGGUGUGUACUYUAAUCAAUAAGCCCUCUUCUAAGGCAUGUGAUGCUUGCUUGACCUCAAGGCCUAUUGAUUCAGUGCUCAAGAGUGAAGAAAAUUCUACUGUCUYUAGCCACUUAAUGAAGUACCCGUGUAAUACUUUUGGAAAACCUCAUACAGAAGUCAAGAUCAACAGAAAAACUGCAUUUGGAACUACAACUCUUGUCUUGm6ACUGAUUUUAGCAAUAAAUCCAGUACUUUGGAAAGAAAAACAAAGCAAAACCAGAUACUAGAUGAGGAGUUUCAAAACUCUCCUCCUGCUAGUGUUUGUUUGAAUGAUAUACAGCACCCCUCCAAGAAGACAACAAACGAUAUAACUCAACCAUCCAGCAAAGUAAm6ACAUAUCACCUACAAUCAGUUCAGAAUCUAAAUUAUUUAGUCCAGCACAUAAAAAACCGAAAACAGCCCAAUACUCAUCACCAGAGCUUAAAAGCUGCAACCCUGGAUAUUCUAACAGUGAACUUCAAAUUAAUAUGACAGAUGGCCCUCGUACCUUAAAUCCUGACAGCCCUCGCUGCAGUAAACACAACCGCCUCUGCAUUCUCCGAGUUGUGGGGAAGGAUGGGGAAAm6ACAAGGGCAGGCAGUUUUAUGCCUGUCCUCUACCUAGAGAAGCACAAUGUGGAUUUUUUGAAUGGGCAGAUUUGUCCUUCCCAUUCUGCAACCAUGGCAAGCGUUCCACCAUGAAAACAGUAUUGAAGAUUGGACCUAACAAUGGAAAGAAUUUUUUUGUGUGUCCUCUUGGGAAGGAAAAACAAUGCAAUUUUUUCCAGUGGGCAGAAAAUGGGCCAGGAAUAAAAAUUAUUCCUGGAUGCUAAUAUCUGUAGAUUCUCUGGCAUUUAGUCUCUUCAAm6ACUGUGUAUAAUGUUUGGUCCUCCUCUGUUUCAUAGAAAAGUCAUAGAAUAUCUAUGAUACAUUGAAAAGUUACUGCAAUAUUUGAGAm6ACUGUUCUUUUUUUUUCUUGUGUGUGCCAUCUUUCCAUUGUUGGCUACGUCUUUUCUUUUGCCUUGAUGAACGUUCUAUGUAUUUCAUCGGAUAUACAGCAUAUUCCAUUUAGGAUGUGUAUUUAAUGCAUUUAGUAAUGACGAUAAAGUGUUUUUAGUAUGCUUUUAGUCUCUUGUAACUGGGGAGAAGCAGUGUUUUUUUUUUAGGAAAGGAUUAUGCGACACAAUAAAAUAAGAUAUUCUGUCUGUAGUGAAUACAUUUCUCAUGUACUAACACUAUUUAUAAUAUAUGAUUAAAGAUAUUUCUUGUUUUAUUAAAUAAUAAGAAAUAAGAUCUCCUUUA
Sequence (MODOMICS CODE ENCODING)	AGUGCCCGCGCAGCGUUGAGUUGCACAGCGGUAUUCUCACCAGGCCCUGCAAUCGGUGGGCCACAGUGCCGGCCACAGAGAUGGUGGAAGGACCAGGCUGUACUCUGAAUGGAGAGAAGAUUCGCGCGCGGGUGCUCCCGGGCCAGGCGGUGACCGGCGUGCGGGGAAGCGCUCUGCGGAGUCUGCAGGGCCGCGCCUUGCGGCUCGCAGCCUCCACGGUUGUGGUCUCCCCGCAGGCUGCUGCACUGAAUAAUGAUUCCAGCCAGAAUGUCUUGAGCCUGUUUAAUGGAUAUGUUUACAGUGGCGUGGAAACUUUGGGGAAGGAGCUCU2000000009UUAUGUACUUUGGACCAAAAGCU2000000009UUACGGAUUCAUUUCGGAAUGAAAGGCUUCAUCAUGAUUAAUCCACUUGAGUAUAAAUAUAAAAAUGGAGCUUCUCCUGUUUUGGAAGUGCAGCUCACCAAAGAUUUGAUUUGUUUCUUUGACUCAUCAGUAGAACUCAGAAACUCAAUGGAAAGCCAACAGAGAAUAAGAAUGAUGAAAGAAUUAGAUGUAUGUUCACCUGAAUUUAGUUUCUUGAGAGCAGAAAGUGAAGUUAAAAAACAGAAAGGCCGGAUGCUAGGUGAUGUGCUAAUGGAUCAGAACGUAUUGCCUGGAGUAGGGAACAUCAUCAAAAAUGAAGCUCUCUUUGACAGUGGUCUCCACCCAGCUGUUAAAGUUUGUCAAUUAACAGAUGA2000000006ACAGAUCCAUCACCUCAUGAAAAUGAUACGUGAUUUCAGCAUUCUCUUUUACAGGUGCCGUAAAGCAGGACUUGCUCUCUCUAAACACUAUAAGGUUUACAAGCGUCCUAAUUGUGGUCAGUGCCACUGCAGAAUAACUGUGUGCCGCUUUGGGGACAAUAACAGAAUGACAUAUUUCUGUCCUCACUGUCAAAAAGAAAAUCCUCAACAUGUUGACAUAUGCAAGCUACCGACUAGAAAUACUAUAAUCAGUUGGACAUCUAGCAGGGUGGAUCAUGUUAUGGACUCCGUGGCUCGGAAGUCGGAAGAGCACUGGACCUGUGUGGUGUGUACU2000000009UUAAUCAAUAAGCCCUCUUCUAAGGCAUGUGAUGCUUGCUUGACCUCAAGGCCUAUUGAUUCAGUGCUCAAGAGUGAAGAAAAUUCUACUGUCU2000000009UUAGCCACUUAAUGAAGUACCCGUGUAAUACUUUUGGAAAACCUCAUACAGAAGUCAAGAUCAACAGAAAAACUGCAUUUGGAACUACAACUCUUGUCUUG2000000006ACUGAUUUUAGCAAUAAAUCCAGUACUUUGGAAAGAAAAACAAAGCAAAACCAGAUACUAGAUGAGGAGUUUCAAAACUCUCCUCCUGCUAGUGUUUGUUUGAAUGAUAUACAGCACCCCUCCAAGAAGACAACAAACGAUAUAACUCAACCAUCCAGCAAAGUAA2000000006ACAUAUCACCUACAAUCAGUUCAGAAUCUAAAUUAUUUAGUCCAGCACAUAAAAAACCGAAAACAGCCCAAUACUCAUCACCAGAGCUUAAAAGCUGCAACCCUGGAUAUUCUAACAGUGAACUUCAAAUUAAUAUGACAGAUGGCCCUCGUACCUUAAAUCCUGACAGCCCUCGCUGCAGUAAACACAACCGCCUCUGCAUUCUCCGAGUUGUGGGGAAGGAUGGGGAAA2000000006ACAAGGGCAGGCAGUUUUAUGCCUGUCCUCUACCUAGAGAAGCACAAUGUGGAUUUUUUGAAUGGGCAGAUUUGUCCUUCCCAUUCUGCAACCAUGGCAAGCGUUCCACCAUGAAAACAGUAUUGAAGAUUGGACCUAACAAUGGAAAGAAUUUUUUUGUGUGUCCUCUUGGGAAGGAAAAACAAUGCAAUUUUUUCCAGUGGGCAGAAAAUGGGCCAGGAAUAAAAAUUAUUCCUGGAUGCUAAUAUCUGUAGAUUCUCUGGCAUUUAGUCUCUUCAA2000000006ACUGUGUAUAAUGUUUGGUCCUCCUCUGUUUCAUAGAAAAGUCAUAGAAUAUCUAUGAUACAUUGAAAAGUUACUGCAAUAUUUGAGA2000000006ACUGUUCUUUUUUUUUCUUGUGUGUGCCAUCUUUCCAUUGUUGGCUACGUCUUUUCUUUUGCCUUGAUGAACGUUCUAUGUAUUUCAUCGGAUAUACAGCAUAUUCCAUUUAGGAUGUGUAUUUAAUGCAUUUAGUAAUGACGAUAAAGUGUUUUUAGUAUGCUUUUAGUCUCUUGUAACUGGGGAGAAGCAGUGUUUUUUUUUUAGGAAAGGAUUAUGCGACACAAUAAAAUAAGAUAUUCUGUCUGUAGUGAAUACAUUUCUCAUGUACUAACACUAUUUAUAAUAUAUGAUUAAAGAUAUUUCUUGUUUUAUUAAAUAAUAAGAAAUAAGAUCUCCUUUA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	331	354	728	1062	1156	1257	1423	1654	1933	2021
Modification Positions	Y	Y	m6A	Y	Y	m6A	m6A	m6A	m6A	m6A
Genomic Coordinates	4:177322553:+	4:177322576:+	4:177339803:+	4:177351492:+	4:177353344:+	4:177353445:+	4:177353611:+	4:177360616:+	4:177362506:+	4:177362594:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq bXBqJigD9oV3 Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 f6YSioLdAWpr Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 f6YSioLdAWpr XWZVGdLC6gGJ Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 Yfn77uLS5tv8	msuJfBpJvM5H VyCX26p5UBRL Lny8GcCeVGc9 UKen6WEino9G BtsJQJ3DteUq bXBqJigD9oV3 Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 XWZVGdLC6gGJ Yfn77uLS5tv8	msuJfBpJvM5H VyCX26p5UBRL 8cMbzB4aD5Se KTLz8piFYdwC Lny8GcCeVGc9 BtsJQJ3DteUq bXBqJigD9oV3 f6YSioLdAWpr XWZVGdLC6gGJ Yfn77uLS5tv8	4HMi5ykupT9V 5aTkEfEpX8Xm msuJfBpJvM5H VyCX26p5UBRL BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr XWZVGdLC6gGJ Yfn77uLS5tv8