General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000348160
Gene ID:	ENSG00000168214
Gene Name:	RBPJ
Sequence (UNICHARACTER ENCODING)	AUCGCCUGGGUAGGUUUCCAGGGAAGGCAGCGAGCAGGAUCCCCUACUCUGCGGGCGGCGCGAGGCGUCUGGCUCUUCGCGGCGGCGGCGAGGGGAAAGGGAGCGCGGGGGCUGGGUGGAAUCGAGGAGUGAGGAAAAAGGGAAGGGGCGGGGGAGAGGGACCAGGGAAGGCGUCGGGGGGAAUCUCGCGAGGGUUGGAGUUUUGGCGAGAGUUUGUGGAAGAUGGCGCCUGUUGUGACAGGUCAUUGAAAUUAUGAGACUAUCAUUCAAAUGGAAGCAUUAUAGUUCUUCGGAACCAUUAUGAUCUCAAAACGAAAGGAGAAUGAUACAGAUACACUGGCUGAGGUGUUUUGAGGUGCAUCGAAGUGUUCCAAGCUGUGACUUACCUUAACAUGUUCUUGAAGUACCAUGGCGUGGAUUAAAAGGAAAUUUGGUGAGCGGCCUCCACCUAAACGACUUACUAGGGAAGCUAUGCGAAAUUAUUUAAAAGAGCGAGGGGAUCAAACAGUACUUAUUCUUCAUGCAAAAGUUGCACAGAAGUCAUAUGGAAAUGAAAAAAGGUUUUUUUGCCCACCUCCUUGUGUAUAUCUUAUGGGCAGUGGAUGGAAGAAAAAAAAAGAACAAAUGGAACGCGAUGGUUGUUCUGAACAAGAGUCUCAACCGUGUGCAUUUAUUGGGAUAGGAAAUAGUGACCAAGAAAUGCAGCAGCUAAACUUGGAAGGAAAGAACUAUUGCACAGCCAAAACAUUGUAUAUAUCUGACUCAGACAAGCGAAAGCACUUCAUGUUGUCUGUAAAGAUGUUCUAUGGCAACAGUGAUGACAUUGGUGUGUUCCUCAGCAAGCGGAUAAAAGUCAUCUCCAAACCUUCCAAAAAGAAGCAGUCAUUGAAAAAUGCUGACUUAUGCAUUGCCUCAGGAACAAAGGUGGCUCUGUUUAAUCGACUACGAUCCCAGACAGUUAGUACCAGAUACUUGCAUGUAGAAGGAGGUAAUUUUCAUGCCAGUUCACAGCAGUGGGGAGCCUUUUUUAUUCAUCUCUUGGAUGAUGAUGAAUCAGAAGGAGAAGAAUUCACAGUCCGAGAUGGCUACAUCCAUUAUGGACAAACAGUCAAACUUGUGUGCUCAGUUACUGGCAUGGCACUCCCAAGAUUGAUAAUUAGGAAAGUUGAUAAGCAGACCGCAUUAUUGGAUGCAGAUGAUCCUGUGUCACAACUCCAUAAAUGUGCAUUUUACCUUAAGGAUACAGAAAGAAUGUAUUUGUGCCUUUCUCAAGAAAGAAUAAUUCAAUUUCAGGCCACUCCAUGUCCAAAAGAACCAAAUAAAGAGAUGAUAAAUGAUGGCGCUUCCUGGACAAUCAUUAGCACAGAUAAGGCAGAGUAUACAUUUUAUGAGGGAAUGGGCCCUGUCCUUGCCCCAGUCACUCCUGUGCCUGUGGUAGAGAGCCUUCAGUUGAAUGGCGGUGGGGACGUAGCAAUGCUUGAACUUACAGGACAGAAUUUCACUCCAAAUUUACGAGUGUGGUUUGGGGAUGUAGAAGCUGAAACUAUGUACAGGUGUGGAGAGAGUAUGCUCUGUGUCGUCCCAGACAUUUCUGCAUUCCGAGAAGGUUGGAGAUGGGUCCGGCAACCAGUCCAGGUUCCAGUAЖCUUUGGUCCGAAAUGAUGGAAUCAUUUAUUCCACCAGCCUUACCUUUACCUACACACCAGAACCAGGGCCGCGGCCACAUUGCAGUGCAGCAGGAGCAAUCCUUCGAGCCAAUUCAAGCCAGGUGCCCCCUAACGAAUCAAACACAAACAGCGAGGGAAGUUACACAAACGCCAGCACAAAUUCAACCAGUGUCACAUCAUCUACAGCCACAGUGGUAUCCUAЖCUACCGUCUUUUUGCUAGGЖCUUAAЖCUGЖCUUGAGUGUGGCAAAAAGUUAACAAAAAAGGAGAAAAAAUGAЖCAAUCGUUUGUGGUUUCUUGGGAAAЖCUUUUCAUACCAGGUGAUACUAUUCAAAAA
Sequence (SHORT NAMES ENCODING)	AUCGCCUGGGUAGGUUUCCAGGGAAGGCAGCGAGCAGGAUCCCCUACUCUGCGGGCGGCGCGAGGCGUCUGGCUCUUCGCGGCGGCGGCGAGGGGAAAGGGAGCGCGGGGGCUGGGUGGAAUCGAGGAGUGAGGAAAAAGGGAAGGGGCGGGGGAGAGGGACCAGGGAAGGCGUCGGGGGGAAUCUCGCGAGGGUUGGAGUUUUGGCGAGAGUUUGUGGAAGAUGGCGCCUGUUGUGACAGGUCAUUGAAAUUAUGAGACUAUCAUUCAAAUGGAAGCAUUAUAGUUCUUCGGAACCAUUAUGAUCUCAAAACGAAAGGAGAAUGAUACAGAUACACUGGCUGAGGUGUUUUGAGGUGCAUCGAAGUGUUCCAAGCUGUGACUUACCUUAACAUGUUCUUGAAGUACCAUGGCGUGGAUUAAAAGGAAAUUUGGUGAGCGGCCUCCACCUAAACGACUUACUAGGGAAGCUAUGCGAAAUUAUUUAAAAGAGCGAGGGGAUCAAACAGUACUUAUUCUUCAUGCAAAAGUUGCACAGAAGUCAUAUGGAAAUGAAAAAAGGUUUUUUUGCCCACCUCCUUGUGUAUAUCUUAUGGGCAGUGGAUGGAAGAAAAAAAAAGAACAAAUGGAACGCGAUGGUUGUUCUGAACAAGAGUCUCAACCGUGUGCAUUUAUUGGGAUAGGAAAUAGUGACCAAGAAAUGCAGCAGCUAAACUUGGAAGGAAAGAACUAUUGCACAGCCAAAACAUUGUAUAUAUCUGACUCAGACAAGCGAAAGCACUUCAUGUUGUCUGUAAAGAUGUUCUAUGGCAACAGUGAUGACAUUGGUGUGUUCCUCAGCAAGCGGAUAAAAGUCAUCUCCAAACCUUCCAAAAAGAAGCAGUCAUUGAAAAAUGCUGACUUAUGCAUUGCCUCAGGAACAAAGGUGGCUCUGUUUAAUCGACUACGAUCCCAGACAGUUAGUACCAGAUACUUGCAUGUAGAAGGAGGUAAUUUUCAUGCCAGUUCACAGCAGUGGGGAGCCUUUUUUAUUCAUCUCUUGGAUGAUGAUGAAUCAGAAGGAGAAGAAUUCACAGUCCGAGAUGGCUACAUCCAUUAUGGACAAACAGUCAAACUUGUGUGCUCAGUUACUGGCAUGGCACUCCCAAGAUUGAUAAUUAGGAAAGUUGAUAAGCAGACCGCAUUAUUGGAUGCAGAUGAUCCUGUGUCACAACUCCAUAAAUGUGCAUUUUACCUUAAGGAUACAGAAAGAAUGUAUUUGUGCCUUUCUCAAGAAAGAAUAAUUCAAUUUCAGGCCACUCCAUGUCCAAAAGAACCAAAUAAAGAGAUGAUAAAUGAUGGCGCUUCCUGGACAAUCAUUAGCACAGAUAAGGCAGAGUAUACAUUUUAUGAGGGAAUGGGCCCUGUCCUUGCCCCAGUCACUCCUGUGCCUGUGGUAGAGAGCCUUCAGUUGAAUGGCGGUGGGGACGUAGCAAUGCUUGAACUUACAGGACAGAAUUUCACUCCAAAUUUACGAGUGUGGUUUGGGGAUGUAGAAGCUGAAACUAUGUACAGGUGUGGAGAGAGUAUGCUCUGUGUCGUCCCAGACAUUUCUGCAUUCCGAGAAGGUUGGAGAUGGGUCCGGCAACCAGUCCAGGUUCCAGUAm6ACUUUGGUCCGAAAUGAUGGAAUCAUUUAUUCCACCAGCCUUACCUUUACCUACACACCAGAACCAGGGCCGCGGCCACAUUGCAGUGCAGCAGGAGCAAUCCUUCGAGCCAAUUCAAGCCAGGUGCCCCCUAACGAAUCAAACACAAACAGCGAGGGAAGUUACACAAACGCCAGCACAAAUUCAACCAGUGUCACAUCAUCUACAGCCACAGUGGUAUCCUAm6ACUACCGUCUUUUUGCUAGGm6ACUUAAm6ACUGm6ACUUGAGUGUGGCAAAAAGUUAACAAAAAAGGAGAAAAAAUGAm6ACAAUCGUUUGUGGUUUCUUGGGAAAm6ACUUUUCAUACCAGGUGAUACUAUUCAAAAA
Sequence (MODOMICS CODE ENCODING)	AUCGCCUGGGUAGGUUUCCAGGGAAGGCAGCGAGCAGGAUCCCCUACUCUGCGGGCGGCGCGAGGCGUCUGGCUCUUCGCGGCGGCGGCGAGGGGAAAGGGAGCGCGGGGGCUGGGUGGAAUCGAGGAGUGAGGAAAAAGGGAAGGGGCGGGGGAGAGGGACCAGGGAAGGCGUCGGGGGGAAUCUCGCGAGGGUUGGAGUUUUGGCGAGAGUUUGUGGAAGAUGGCGCCUGUUGUGACAGGUCAUUGAAAUUAUGAGACUAUCAUUCAAAUGGAAGCAUUAUAGUUCUUCGGAACCAUUAUGAUCUCAAAACGAAAGGAGAAUGAUACAGAUACACUGGCUGAGGUGUUUUGAGGUGCAUCGAAGUGUUCCAAGCUGUGACUUACCUUAACAUGUUCUUGAAGUACCAUGGCGUGGAUUAAAAGGAAAUUUGGUGAGCGGCCUCCACCUAAACGACUUACUAGGGAAGCUAUGCGAAAUUAUUUAAAAGAGCGAGGGGAUCAAACAGUACUUAUUCUUCAUGCAAAAGUUGCACAGAAGUCAUAUGGAAAUGAAAAAAGGUUUUUUUGCCCACCUCCUUGUGUAUAUCUUAUGGGCAGUGGAUGGAAGAAAAAAAAAGAACAAAUGGAACGCGAUGGUUGUUCUGAACAAGAGUCUCAACCGUGUGCAUUUAUUGGGAUAGGAAAUAGUGACCAAGAAAUGCAGCAGCUAAACUUGGAAGGAAAGAACUAUUGCACAGCCAAAACAUUGUAUAUAUCUGACUCAGACAAGCGAAAGCACUUCAUGUUGUCUGUAAAGAUGUUCUAUGGCAACAGUGAUGACAUUGGUGUGUUCCUCAGCAAGCGGAUAAAAGUCAUCUCCAAACCUUCCAAAAAGAAGCAGUCAUUGAAAAAUGCUGACUUAUGCAUUGCCUCAGGAACAAAGGUGGCUCUGUUUAAUCGACUACGAUCCCAGACAGUUAGUACCAGAUACUUGCAUGUAGAAGGAGGUAAUUUUCAUGCCAGUUCACAGCAGUGGGGAGCCUUUUUUAUUCAUCUCUUGGAUGAUGAUGAAUCAGAAGGAGAAGAAUUCACAGUCCGAGAUGGCUACAUCCAUUAUGGACAAACAGUCAAACUUGUGUGCUCAGUUACUGGCAUGGCACUCCCAAGAUUGAUAAUUAGGAAAGUUGAUAAGCAGACCGCAUUAUUGGAUGCAGAUGAUCCUGUGUCACAACUCCAUAAAUGUGCAUUUUACCUUAAGGAUACAGAAAGAAUGUAUUUGUGCCUUUCUCAAGAAAGAAUAAUUCAAUUUCAGGCCACUCCAUGUCCAAAAGAACCAAAUAAAGAGAUGAUAAAUGAUGGCGCUUCCUGGACAAUCAUUAGCACAGAUAAGGCAGAGUAUACAUUUUAUGAGGGAAUGGGCCCUGUCCUUGCCCCAGUCACUCCUGUGCCUGUGGUAGAGAGCCUUCAGUUGAAUGGCGGUGGGGACGUAGCAAUGCUUGAACUUACAGGACAGAAUUUCACUCCAAAUUUACGAGUGUGGUUUGGGGAUGUAGAAGCUGAAACUAUGUACAGGUGUGGAGAGAGUAUGCUCUGUGUCGUCCCAGACAUUUCUGCAUUCCGAGAAGGUUGGAGAUGGGUCCGGCAACCAGUCCAGGUUCCAGUA2000000006ACUUUGGUCCGAAAUGAUGGAAUCAUUUAUUCCACCAGCCUUACCUUUACCUACACACCAGAACCAGGGCCGCGGCCACAUUGCAGUGCAGCAGGAGCAAUCCUUCGAGCCAAUUCAAGCCAGGUGCCCCCUAACGAAUCAAACACAAACAGCGAGGGAAGUUACACAAACGCCAGCACAAAUUCAACCAGUGUCACAUCAUCUACAGCCACAGUGGUAUCCUA2000000006ACUACCGUCUUUUUGCUAGG2000000006ACUUAA2000000006ACUG2000000006ACUUGAGUGUGGCAAAAAGUUAACAAAAAAGGAGAAAAAAUGA2000000006ACAAUCGUUUGUGGUUUCUUGGGAAA2000000006ACUUUUCAUACCAGGUGAUACUAUUCAAAAA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	1645	1869	1889	1895	1899	1942	1968
Modification Positions	m6A	m6A	m6A	m6A	m6A	m6A	m6A
Genomic Coordinates	4:26430783:+	4:26431007:+	4:26431027:+	4:26431033:+	4:26431037:+	4:26431080:+	4:26431106:+
Level of Experimental Evidence	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 6UuHp6YApVKv Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 8cMbzB4aD5Se BsCW7emuRX7M KENzb7mwdBd9 Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G iezFbUdmY3A6	XWZVGdLC6gGJ iezFbUdmY3A6	4HMi5ykupT9V 5aTkEfEpX8Xm 5FhTyQVy2tKW 6UuHp6YApVKv aivdrAsbdKEU gBgcfFQ5WN9C jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U BkoLW2CBToyL Lny8GcCeVGc9 UKen6WEino9G XWZVGdLC6gGJ iezFbUdmY3A6	4HMi5ykupT9V 5aTkEfEpX8Xm 6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 XWZVGdLC6gGJ iezFbUdmY3A6	4HMi5ykupT9V 5aTkEfEpX8Xm 6UuHp6YApVKv aivdrAsbdKEU jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 UKen6WEino9G XWZVGdLC6gGJ iezFbUdmY3A6	4HMi5ykupT9V jNkxUQNx8GRd msuJfBpJvM5H VyCX26p5UBRL aJksAshEgQ8U Lny8GcCeVGc9 UKen6WEino9G XWZVGdLC6gGJ iezFbUdmY3A6	4HMi5ykupT9V 5aTkEfEpX8Xm 6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 UKen6WEino9G XWZVGdLC6gGJ iezFbUdmY3A6