General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000405727
Gene ID:	ENSG00000164144
Gene Name:	ARFIP1
Sequence (UNICHARACTER ENCODING)	CGCUGCUCUUGGUUCUGGUUCUGGAGGCUGGGUUGAGAGGUCGCCGGUCCGACUGUCCUCGGCGGUUGGUCAGUGUGAAUUUGUGACAGCUGCAGUUGCUCCCCGCCCCCGAGCAGCCGAGGAGUCUACCAUGGCUCAAGAAUCUCCCAAAAAUUCAGCAGCAGAAAUUCCAGUGACUAGUAAUGGAGAAGUUGAUGACUCUCGUGAACAUAGCUUUAAUAGGGAUUUGAAGCAUUCAUUACCAUCUGGACUUGGUCUCUCAGAAACCCAAAUUACAUCUCAUGGCUUUGACAAUACCAAAGAGGGUGUUAUUGAAGCAGGAGCAUUUCAAGGUGGCCAGAGAACACAGACAAAAAGUGGACCAGUUAUUCUAGCAGAUGAAAUUAAAAAUCCUGCAAUGGAAAAGUUAGAACUUGUUAGAAAAUGGAGUCUAAЖCACCUAUAAGUGUACUCGACAGAUUAUCUCUGAGAAGCUAGGCCGUGGCUCAAGAACUGUGGACCUUGAACUUGAAGCUCAGAUUGAUAUAUUAAGGGAUAЖCAAGAAAAAAUAUGAAAAUAUUUUAAAACUGGCUCAAACAUUGUCGACCCAGCUUUUCCAGAUGGUACAUACCCAAAGGCAACUUGGAGAUGCAUUUGCUGACCUGAGUUUGAAGUCACUAGAACUUCAUGAAGAAUUUGGCUAUAAUGCCGAUACCCAGAAACUGCUGGCUAAAAAUGGAGAGACUCUUCUUGGGGCCAUUAAUUUUUUCAUUGCUAGUGUGAACACUUUGGUGAAUAAAACCAUUGAAGAUACAUUAAUGACUGUGAAACAGUAUGAAAGUGCCAGGAUUGAAUAUGAUGCAUAUCGCACUGAUUUGGAAGAACUGAAUCUUGGACCACGUGACGCAAACACUCUGCCAAAGAUUGAGCAGUCACAGCAUCUCUUCCAAGCACAUAAGGAAAAAUAUGAUAAAAUGCGCAAUGAUGUUUCUGUCAAAUUGAAAUUUCUAGAAGAAAAUAAGGUUAAAGUAUUGCACAAUCAGCUGGUCCUUUUCCACAAUGCCAUUGCCGCUUACUUUGCUGGGAAUCAGAAGCAGCUUGAЖCAGACACUUAAЖCAGUUCCAUAUCAAAUUGAAAACCCCUGGAGUGGAUGCCCCAUCUUGGCUUGAAGAACAGUAAAAUCACAGCGGAAAAUAAAAAGAAAGUCGCGUUGUUAUAUUUCUAAACCAACCUAЖCAAGAAUUAAGCAGAGUUGGGGGAAGUGGGAGGGGUGACAAGCAUUAUAGUGAUUCUUGCACAAACAGCUPUAAUUUUUCCCUUUUUCAUACUPUAACAAUUGAЖCUGUUAAGGGUGGUUUUAAUGUAAЖCAUAGUUUCUAUAAUCUGAACACAAUAAUUUUCCUUUUUGAGAAAUCCUUUUGUAUUGUGAGGGUUGAUGGCUAUUUCUGUAGUUUGAAAACAUCUAAUAGAGAUUUGCACUGACAAGAUAAAAAUUCAAGGUUUUUGGUCCUGGAAAUGAGGGCCGAUUGUAACUUUUCCAAAGGGAGGUUUACAUGAUUUGUAUCAACAUCAGAUAUUUUAUAUGUGAAUAUAUUAAЖCAUCUPUAAGAGAUUCAUUUUCAUGUAUU
Sequence (SHORT NAMES ENCODING)	CGCUGCUCUUGGUUCUGGUUCUGGAGGCUGGGUUGAGAGGUCGCCGGUCCGACUGUCCUCGGCGGUUGGUCAGUGUGAAUUUGUGACAGCUGCAGUUGCUCCCCGCCCCCGAGCAGCCGAGGAGUCUACCAUGGCUCAAGAAUCUCCCAAAAAUUCAGCAGCAGAAAUUCCAGUGACUAGUAAUGGAGAAGUUGAUGACUCUCGUGAACAUAGCUUUAAUAGGGAUUUGAAGCAUUCAUUACCAUCUGGACUUGGUCUCUCAGAAACCCAAAUUACAUCUCAUGGCUUUGACAAUACCAAAGAGGGUGUUAUUGAAGCAGGAGCAUUUCAAGGUGGCCAGAGAACACAGACAAAAAGUGGACCAGUUAUUCUAGCAGAUGAAAUUAAAAAUCCUGCAAUGGAAAAGUUAGAACUUGUUAGAAAAUGGAGUCUAAm6ACACCUAUAAGUGUACUCGACAGAUUAUCUCUGAGAAGCUAGGCCGUGGCUCAAGAACUGUGGACCUUGAACUUGAAGCUCAGAUUGAUAUAUUAAGGGAUAm6ACAAGAAAAAAUAUGAAAAUAUUUUAAAACUGGCUCAAACAUUGUCGACCCAGCUUUUCCAGAUGGUACAUACCCAAAGGCAACUUGGAGAUGCAUUUGCUGACCUGAGUUUGAAGUCACUAGAACUUCAUGAAGAAUUUGGCUAUAAUGCCGAUACCCAGAAACUGCUGGCUAAAAAUGGAGAGACUCUUCUUGGGGCCAUUAAUUUUUUCAUUGCUAGUGUGAACACUUUGGUGAAUAAAACCAUUGAAGAUACAUUAAUGACUGUGAAACAGUAUGAAAGUGCCAGGAUUGAAUAUGAUGCAUAUCGCACUGAUUUGGAAGAACUGAAUCUUGGACCACGUGACGCAAACACUCUGCCAAAGAUUGAGCAGUCACAGCAUCUCUUCCAAGCACAUAAGGAAAAAUAUGAUAAAAUGCGCAAUGAUGUUUCUGUCAAAUUGAAAUUUCUAGAAGAAAAUAAGGUUAAAGUAUUGCACAAUCAGCUGGUCCUUUUCCACAAUGCCAUUGCCGCUUACUUUGCUGGGAAUCAGAAGCAGCUUGAm6ACAGACACUUAAm6ACAGUUCCAUAUCAAAUUGAAAACCCCUGGAGUGGAUGCCCCAUCUUGGCUUGAAGAACAGUAAAAUCACAGCGGAAAAUAAAAAGAAAGUCGCGUUGUUAUAUUUCUAAACCAACCUAm6ACAAGAAUUAAGCAGAGUUGGGGGAAGUGGGAGGGGUGACAAGCAUUAUAGUGAUUCUUGCACAAACAGCUYUAAUUUUUCCCUUUUUCAUACUYUAACAAUUGAm6ACUGUUAAGGGUGGUUUUAAUGUAAm6ACAUAGUUUCUAUAAUCUGAACACAAUAAUUUUCCUUUUUGAGAAAUCCUUUUGUAUUGUGAGGGUUGAUGGCUAUUUCUGUAGUUUGAAAACAUCUAAUAGAGAUUUGCACUGACAAGAUAAAAAUUCAAGGUUUUUGGUCCUGGAAAUGAGGGCCGAUUGUAACUUUUCCAAAGGGAGGUUUACAUGAUUUGUAUCAACAUCAGAUAUUUUAUAUGUGAAUAUAUUAAm6ACAUCUYUAAGAGAUUCAUUUUCAUGUAUU
Sequence (MODOMICS CODE ENCODING)	CGCUGCUCUUGGUUCUGGUUCUGGAGGCUGGGUUGAGAGGUCGCCGGUCCGACUGUCCUCGGCGGUUGGUCAGUGUGAAUUUGUGACAGCUGCAGUUGCUCCCCGCCCCCGAGCAGCCGAGGAGUCUACCAUGGCUCAAGAAUCUCCCAAAAAUUCAGCAGCAGAAAUUCCAGUGACUAGUAAUGGAGAAGUUGAUGACUCUCGUGAACAUAGCUUUAAUAGGGAUUUGAAGCAUUCAUUACCAUCUGGACUUGGUCUCUCAGAAACCCAAAUUACAUCUCAUGGCUUUGACAAUACCAAAGAGGGUGUUAUUGAAGCAGGAGCAUUUCAAGGUGGCCAGAGAACACAGACAAAAAGUGGACCAGUUAUUCUAGCAGAUGAAAUUAAAAAUCCUGCAAUGGAAAAGUUAGAACUUGUUAGAAAAUGGAGUCUAA2000000006ACACCUAUAAGUGUACUCGACAGAUUAUCUCUGAGAAGCUAGGCCGUGGCUCAAGAACUGUGGACCUUGAACUUGAAGCUCAGAUUGAUAUAUUAAGGGAUA2000000006ACAAGAAAAAAUAUGAAAAUAUUUUAAAACUGGCUCAAACAUUGUCGACCCAGCUUUUCCAGAUGGUACAUACCCAAAGGCAACUUGGAGAUGCAUUUGCUGACCUGAGUUUGAAGUCACUAGAACUUCAUGAAGAAUUUGGCUAUAAUGCCGAUACCCAGAAACUGCUGGCUAAAAAUGGAGAGACUCUUCUUGGGGCCAUUAAUUUUUUCAUUGCUAGUGUGAACACUUUGGUGAAUAAAACCAUUGAAGAUACAUUAAUGACUGUGAAACAGUAUGAAAGUGCCAGGAUUGAAUAUGAUGCAUAUCGCACUGAUUUGGAAGAACUGAAUCUUGGACCACGUGACGCAAACACUCUGCCAAAGAUUGAGCAGUCACAGCAUCUCUUCCAAGCACAUAAGGAAAAAUAUGAUAAAAUGCGCAAUGAUGUUUCUGUCAAAUUGAAAUUUCUAGAAGAAAAUAAGGUUAAAGUAUUGCACAAUCAGCUGGUCCUUUUCCACAAUGCCAUUGCCGCUUACUUUGCUGGGAAUCAGAAGCAGCUUGA2000000006ACAGACACUUAA2000000006ACAGUUCCAUAUCAAAUUGAAAACCCCUGGAGUGGAUGCCCCAUCUUGGCUUGAAGAACAGUAAAAUCACAGCGGAAAAUAAAAAGAAAGUCGCGUUGUUAUAUUUCUAAACCAACCUA2000000006ACAAGAAUUAAGCAGAGUUGGGGGAAGUGGGAGGGGUGACAAGCAUUAUAGUGAUUCUUGCACAAACAGCU2000000009UUAAUUUUUCCCUUUUUCAUACU2000000009UUAACAAUUGA2000000006ACUGUUAAGGGUGGUUUUAAUGUAA2000000006ACAUAGUUUCUAUAAUCUGAACACAAUAAUUUUCCUUUUUGAGAAAUCCUUUUGUAUUGUGAGGGUUGAUGGCUAUUUCUGUAGUUUGAAAACAUCUAAUAGAGAUUUGCACUGACAAGAUAAAAAUUCAAGGUUUUUGGUCCUGGAAAUGAGGGCCGAUUGUAACUUUUCCAAAGGGAGGUUUACAUGAUUUGUAUCAACAUCAGAUAUUUUAUAUGUGAAUAUAUUAA2000000006ACAUCU2000000009UUAAGAGAUUCAUUUUCAUGUAUU

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	435	537	1081	1093	1212	1283	1306	1317	1342	1572	1578
Modification Positions	m6A	m6A	m6A	m6A	m6A	Y	Y	m6A	m6A	m6A	Y
Genomic Coordinates	4:152872554:+	4:152881054:+	4:152910144:+	4:152910156:+	4:152910275:+	4:152910346:+	4:152910369:+	4:152910380:+	4:152910405:+	4:152910635:+	4:152910641:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	bXBqJigD9oV3 Yfn77uLS5tv8	bXBqJigD9oV3 Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 Yfn77uLS5tv8	4HMi5ykupT9V 5aTkEfEpX8Xm BsCW7emuRX7M KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq bXBqJigD9oV3 Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 Yfn77uLS5tv8