General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000265174
Gene ID:	ENSG00000138801
Gene Name:	PAPSS1
Sequence (UNICHARACTER ENCODING)	CUCUUGCUACCCUCCCGGCGCAGAGAACCCCGGCUGCUCAGCGCGCUCCGCGGUCAUGGAGAUCCCCGGGAGCCUGUGCAAGAAAGUCAAЖCUGAGCAAUAACGCGCAGAACUGGGGAAUGCAGAGAGCAACCAAUGUCACCUACCAAGCCCAUCAUGUCAGCAGGAACAAGAGAGGUCAGGUGGUGGGGACCAGAGGUGGCUUUCGUGGUUGCACAGUUUGGCUAACAGGCUUGUCUGGAGCGGGAAAGACUACUGUGAGCAUGGCCUUGGAGGAGUACCUGGUUUGUCAUGGUAUUCCAUGCUACACUCUGGAUGGUGACAAUAUUCGUCAAGGUCUCAAUAAAAAUCUUGGCUPUAGUCCUGAAGACAGAGAAGAGAAUGUUCGACGCAUCGCAGAAGUUGCUAAACUGUUUGCAGAUGCUGGCUUAGUGUGCAUCACAAGUUUCAUAUCACCUUACACUCAGGAUCGCAACAAUGCAAGGCAAAUUCAUGAAGGUGCAAGUUUACCGUUUUUUGAAGUAUUUGUUGAUGCUCCUCUGCAUGUUUGUGAACAGAGGGAUGUCAAAGGЖCUCUACAAAAAAGCCCGGGCAGGAGAAAUUAAAGGUUUCACUGGGAUCGAUUCUGAAUAUGAAAAGCCAGAGGCCCCUGAGUUGGUGCUGAAAACAGACUCCUGUGAUGUAAAUGACUGUGUCCAGCAAGUUGUGGAACUUCUACAGGAACGGGAUAUUGUACCUGUGGAUGCAUCUUAUGAAGUAAAAGAACUAUAUGUGCCAGAAAAUAAACUUCAUUUGGCAAAAACAGAUGCGGAAACAUUACCAGCACUGAAAAUUAAUAAAGUGGAUAUGCAGUGGGUGCAGGUUUUGGCAGAAGGUUGGGCAACCCCAUUGAAUGGCUPUAUGAGAGAGAGGGAGUACUUGCAGUGCCUUCAUUUUGAUUGUCUUCUGGAUGGAGGUGUCAUUAЖCUUGUCAGUACCUAUAGUUCUGACUGCGACUCAUGAAGAUAAAGAGAGGCUGGACGGCUGUACAGCAUUUGCUCUGAUGUAUGAGGGCCGCCGUGUGGCCAUUCUUCGCAAUCCAGAGUUUUUUGAGCACAGGAAAGAGGAGCGCUGUGCCAGACAGUGGGGAACGACAUGCAAGAЖCCACCCCUAUAUUAAGAUGGUGAUGGAACAAGGAGAUUGGCUGAUUGGAGGAGAUCUUCAAGUCUUGGAUCGAGUUUAUUGGAAUGAUGGUCUUGAUCAGUAUCGUCUUACUCCUACUGAGCUAAAGCAGAAAUUUAAAGAUAUGAAUGCUGAUGCUGUCUUUGCAUUUCAACUACGCAACCBAGUGCACAAUGGACAUGCCCUGUUAAUGCAGGAUACCCAUAAGCAACUUCUAGAGAGGGGCUACCGGCGCCCUGUCCPCCUCCPCCACCCUCUGGGUGGCUGGACAAAGGAUGACGAUGUUCCUUUGAUGUGGCGUAUGAAGCAGCAUGCUGCAGUGUUGGAGGAAGGAGUUCUGAAUCCUGAGACGACAGUGGUGGCCAUCUUCCCAUCUCCCAUGAUGUAUGCUGGACCAACUGAGGUCCAGUGGCAUUGCAGAGCACGGAUGGUUGCAGGAGCCAACUUUUACЖUUGUUGGACGAGЖCCCUGCUGGCAUGCCUCAUCCAGAAACAGGGAAGGAUCUPUAUGAGCCAAGUCAUGGUGCCAAAGUGCUGACGAUGGCCCCUGGUUUAAUCACUUUGGAAAUAGUUCCCUUUCGAGUUGCAGCUUACAACAAGAAAAAGAAGCGUAUGGACUACUAUGACUCUGAACACCAUGAAGACUUUGAAUUUAUUUCAGGAACACGAAUGCGCAAACUUGCUCGAGAAGGCCAGAAACCACCUGAAGGUUUCAUGGCUCCCAAGGCUUGGACCGUGCUGACAGAAUACUACЖAAUCCUUGGAGAAAGCUUAGGCUGUUAACCCAGUCACUCCACCUUUGACACAUUACUAGUAЖCAAGAGGGGACCACAUAGUCUCUGUUGGCAUUUCUUUGUGGUGUCUGUCUGGACAUGCUUCCUAAAAACAGACCAUUUUCCUUAЖCUUGCAUCAGUUUUGGUCUGCCUUAUGAGUUCUGUUUUGAACAAGUGUAACACACUGAUGGUUUUAAUGUAUCUUUUCCACUUAUUAUAGUUAUAUUCCUACЖAUACAAUUUUAAAAUUGUCUUUUUAUAUUAUAUUUAUGCUUCUGUGUCAUGAUUUUUUCAAGCUGUUAUAUUAGUUGUAACCAGUAGUAUUCACAUUAAAUCUUGCUUUUUUUCCCCUUAAAAAAAGAAAAAAAUUACCAAACAAUAAЖCUUGGCUAGACCUUGUUUUGAGGAUUUUACAAGACCUUUGUAGCGAUUAGAUUUUUUUUCUACAUUGAAAAUAGAAACUGCUUCCUUUCUUCUUUCCAGUCAGCUAUUGGUCUUUCCAGCUGUUAUAAUCUAAAGUAUUCUUAUGAUCUGUGUAAGCUCUGAAUGAACUUCUPUACUCAAUAAAAUUAAUUUUUUGGCUUCUUA
Sequence (SHORT NAMES ENCODING)	CUCUUGCUACCCUCCCGGCGCAGAGAACCCCGGCUGCUCAGCGCGCUCCGCGGUCAUGGAGAUCCCCGGGAGCCUGUGCAAGAAAGUCAAm6ACUGAGCAAUAACGCGCAGAACUGGGGAAUGCAGAGAGCAACCAAUGUCACCUACCAAGCCCAUCAUGUCAGCAGGAACAAGAGAGGUCAGGUGGUGGGGACCAGAGGUGGCUUUCGUGGUUGCACAGUUUGGCUAACAGGCUUGUCUGGAGCGGGAAAGACUACUGUGAGCAUGGCCUUGGAGGAGUACCUGGUUUGUCAUGGUAUUCCAUGCUACACUCUGGAUGGUGACAAUAUUCGUCAAGGUCUCAAUAAAAAUCUUGGCUYUAGUCCUGAAGACAGAGAAGAGAAUGUUCGACGCAUCGCAGAAGUUGCUAAACUGUUUGCAGAUGCUGGCUUAGUGUGCAUCACAAGUUUCAUAUCACCUUACACUCAGGAUCGCAACAAUGCAAGGCAAAUUCAUGAAGGUGCAAGUUUACCGUUUUUUGAAGUAUUUGUUGAUGCUCCUCUGCAUGUUUGUGAACAGAGGGAUGUCAAAGGm6ACUCUACAAAAAAGCCCGGGCAGGAGAAAUUAAAGGUUUCACUGGGAUCGAUUCUGAAUAUGAAAAGCCAGAGGCCCCUGAGUUGGUGCUGAAAACAGACUCCUGUGAUGUAAAUGACUGUGUCCAGCAAGUUGUGGAACUUCUACAGGAACGGGAUAUUGUACCUGUGGAUGCAUCUUAUGAAGUAAAAGAACUAUAUGUGCCAGAAAAUAAACUUCAUUUGGCAAAAACAGAUGCGGAAACAUUACCAGCACUGAAAAUUAAUAAAGUGGAUAUGCAGUGGGUGCAGGUUUUGGCAGAAGGUUGGGCAACCCCAUUGAAUGGCUYUAUGAGAGAGAGGGAGUACUUGCAGUGCCUUCAUUUUGAUUGUCUUCUGGAUGGAGGUGUCAUUAm6ACUUGUCAGUACCUAUAGUUCUGACUGCGACUCAUGAAGAUAAAGAGAGGCUGGACGGCUGUACAGCAUUUGCUCUGAUGUAUGAGGGCCGCCGUGUGGCCAUUCUUCGCAAUCCAGAGUUUUUUGAGCACAGGAAAGAGGAGCGCUGUGCCAGACAGUGGGGAACGACAUGCAAGAm6ACCACCCCUAUAUUAAGAUGGUGAUGGAACAAGGAGAUUGGCUGAUUGGAGGAGAUCUUCAAGUCUUGGAUCGAGUUUAUUGGAAUGAUGGUCUUGAUCAGUAUCGUCUUACUCCUACUGAGCUAAAGCAGAAAUUUAAAGAUAUGAAUGCUGAUGCUGUCUUUGCAUUUCAACUACGCAACCCmAGUGCACAAUGGACAUGCCCUGUUAAUGCAGGAUACCCAUAAGCAACUUCUAGAGAGGGGCUACCGGCGCCCUGUCCYCCUCCYCCACCCUCUGGGUGGCUGGACAAAGGAUGACGAUGUUCCUUUGAUGUGGCGUAUGAAGCAGCAUGCUGCAGUGUUGGAGGAAGGAGUUCUGAAUCCUGAGACGACAGUGGUGGCCAUCUUCCCAUCUCCCAUGAUGUAUGCUGGACCAACUGAGGUCCAGUGGCAUUGCAGAGCACGGAUGGUUGCAGGAGCCAACUUUUACm6AUUGUUGGACGAGm6ACCCUGCUGGCAUGCCUCAUCCAGAAACAGGGAAGGAUCUYUAUGAGCCAAGUCAUGGUGCCAAAGUGCUGACGAUGGCCCCUGGUUUAAUCACUUUGGAAAUAGUUCCCUUUCGAGUUGCAGCUUACAACAAGAAAAAGAAGCGUAUGGACUACUAUGACUCUGAACACCAUGAAGACUUUGAAUUUAUUUCAGGAACACGAAUGCGCAAACUUGCUCGAGAAGGCCAGAAACCACCUGAAGGUUUCAUGGCUCCCAAGGCUUGGACCGUGCUGACAGAAUACUACm6AAAUCCUUGGAGAAAGCUUAGGCUGUUAACCCAGUCACUCCACCUUUGACACAUUACUAGUAm6ACAAGAGGGGACCACAUAGUCUCUGUUGGCAUUUCUUUGUGGUGUCUGUCUGGACAUGCUUCCUAAAAACAGACCAUUUUCCUUAm6ACUUGCAUCAGUUUUGGUCUGCCUUAUGAGUUCUGUUUUGAACAAGUGUAACACACUGAUGGUUUUAAUGUAUCUUUUCCACUUAUUAUAGUUAUAUUCCUACm6AAUACAAUUUUAAAAUUGUCUUUUUAUAUUAUAUUUAUGCUUCUGUGUCAUGAUUUUUUCAAGCUGUUAUAUUAGUUGUAACCAGUAGUAUUCACAUUAAAUCUUGCUUUUUUUCCCCUUAAAAAAAGAAAAAAAUUACCAAACAAUAAm6ACUUGGCUAGACCUUGUUUUGAGGAUUUUACAAGACCUUUGUAGCGAUUAGAUUUUUUUUCUACAUUGAAAAUAGAAACUGCUUCCUUUCUUCUUUCCAGUCAGCUAUUGGUCUUUCCAGCUGUUAUAAUCUAAAGUAUUCUUAUGAUCUGUGUAAGCUCUGAAUGAACUUCUYUACUCAAUAAAAUUAAUUUUUUGGCUUCUUA
Sequence (MODOMICS CODE ENCODING)	CUCUUGCUACCCUCCCGGCGCAGAGAACCCCGGCUGCUCAGCGCGCUCCGCGGUCAUGGAGAUCCCCGGGAGCCUGUGCAAGAAAGUCAA2000000006ACUGAGCAAUAACGCGCAGAACUGGGGAAUGCAGAGAGCAACCAAUGUCACCUACCAAGCCCAUCAUGUCAGCAGGAACAAGAGAGGUCAGGUGGUGGGGACCAGAGGUGGCUUUCGUGGUUGCACAGUUUGGCUAACAGGCUUGUCUGGAGCGGGAAAGACUACUGUGAGCAUGGCCUUGGAGGAGUACCUGGUUUGUCAUGGUAUUCCAUGCUACACUCUGGAUGGUGACAAUAUUCGUCAAGGUCUCAAUAAAAAUCUUGGCU2000000009UUAGUCCUGAAGACAGAGAAGAGAAUGUUCGACGCAUCGCAGAAGUUGCUAAACUGUUUGCAGAUGCUGGCUUAGUGUGCAUCACAAGUUUCAUAUCACCUUACACUCAGGAUCGCAACAAUGCAAGGCAAAUUCAUGAAGGUGCAAGUUUACCGUUUUUUGAAGUAUUUGUUGAUGCUCCUCUGCAUGUUUGUGAACAGAGGGAUGUCAAAGG2000000006ACUCUACAAAAAAGCCCGGGCAGGAGAAAUUAAAGGUUUCACUGGGAUCGAUUCUGAAUAUGAAAAGCCAGAGGCCCCUGAGUUGGUGCUGAAAACAGACUCCUGUGAUGUAAAUGACUGUGUCCAGCAAGUUGUGGAACUUCUACAGGAACGGGAUAUUGUACCUGUGGAUGCAUCUUAUGAAGUAAAAGAACUAUAUGUGCCAGAAAAUAAACUUCAUUUGGCAAAAACAGAUGCGGAAACAUUACCAGCACUGAAAAUUAAUAAAGUGGAUAUGCAGUGGGUGCAGGUUUUGGCAGAAGGUUGGGCAACCCCAUUGAAUGGCU2000000009UUAUGAGAGAGAGGGAGUACUUGCAGUGCCUUCAUUUUGAUUGUCUUCUGGAUGGAGGUGUCAUUA2000000006ACUUGUCAGUACCUAUAGUUCUGACUGCGACUCAUGAAGAUAAAGAGAGGCUGGACGGCUGUACAGCAUUUGCUCUGAUGUAUGAGGGCCGCCGUGUGGCCAUUCUUCGCAAUCCAGAGUUUUUUGAGCACAGGAAAGAGGAGCGCUGUGCCAGACAGUGGGGAACGACAUGCAAGA2000000006ACCACCCCUAUAUUAAGAUGGUGAUGGAACAAGGAGAUUGGCUGAUUGGAGGAGAUCUUCAAGUCUUGGAUCGAGUUUAUUGGAAUGAUGGUCUUGAUCAGUAUCGUCUUACUCCUACUGAGCUAAAGCAGAAAUUUAAAGAUAUGAAUGCUGAUGCUGUCUUUGCAUUUCAACUACGCAACC2000000090CAGUGCACAAUGGACAUGCCCUGUUAAUGCAGGAUACCCAUAAGCAACUUCUAGAGAGGGGCUACCGGCGCCCUGUCC2000000009UCCUCC2000000009UCCACCCUCUGGGUGGCUGGACAAAGGAUGACGAUGUUCCUUUGAUGUGGCGUAUGAAGCAGCAUGCUGCAGUGUUGGAGGAAGGAGUUCUGAAUCCUGAGACGACAGUGGUGGCCAUCUUCCCAUCUCCCAUGAUGUAUGCUGGACCAACUGAGGUCCAGUGGCAUUGCAGAGCACGGAUGGUUGCAGGAGCCAACUUUUAC2000000006AUUGUUGGACGAG2000000006ACCCUGCUGGCAUGCCUCAUCCAGAAACAGGGAAGGAUCU2000000009UUAUGAGCCAAGUCAUGGUGCCAAAGUGCUGACGAUGGCCCCUGGUUUAAUCACUUUGGAAAUAGUUCCCUUUCGAGUUGCAGCUUACAACAAGAAAAAGAAGCGUAUGGACUACUAUGACUCUGAACACCAUGAAGACUUUGAAUUUAUUUCAGGAACACGAAUGCGCAAACUUGCUCGAGAAGGCCAGAAACCACCUGAAGGUUUCAUGGCUCCCAAGGCUUGGACCGUGCUGACAGAAUACUAC2000000006AAAUCCUUGGAGAAAGCUUAGGCUGUUAACCCAGUCACUCCACCUUUGACACAUUACUAGUA2000000006ACAAGAGGGGACCACAUAGUCUCUGUUGGCAUUUCUUUGUGGUGUCUGUCUGGACAUGCUUCCUAAAAACAGACCAUUUUCCUUA2000000006ACUUGCAUCAGUUUUGGUCUGCCUUAUGAGUUCUGUUUUGAACAAGUGUAACACACUGAUGGUUUUAAUGUAUCUUUUCCACUUAUUAUAGUUAUAUUCCUAC2000000006AAUACAAUUUUAAAAUUGUCUUUUUAUAUUAUAUUUAUGCUUCUGUGUCAUGAUUUUUUCAAGCUGUUAUAUUAGUUGUAACCAGUAGUAUUCACAUUAAAUCUUGCUUUUUUUCCCCUUAAAAAAAGAAAAAAAUUACCAAACAAUAA2000000006ACUUGGCUAGACCUUGUUUUGAGGAUUUUACAAGACCUUUGUAGCGAUUAGAUUUUUUUUCUACAUUGAAAAUAGAAACUGCUUCCUUUCUUCUUUCCAGUCAGCUAUUGGUCUUUCCAGCUGUUAUAAUCUAAAGUAUUCUUAUGAUCUGUGUAAGCUCUGAAUGAACUUCU2000000009UUACUCAAUAAAAUUAAUUUUUUGGCUUCUUA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	91	357	571	897	963	1140	1323	1401	1407	1610	1623	1663	1910	1972	2057	2160	2309	2482
Modification Positions	m6A	Y	m6A	Y	m6A	m6A	Cm	Y	Y	m6A	m6A	Y	m6A	m6A	m6A	m6A	m6A	Y
Genomic Coordinates	4:107720144:-	4:107693880:-	4:107687073:-	4:107656949:-	4:107654888:-	4:107654711:-	4:107645040:-	4:107644962:-	4:107644956:-	4:107631812:-	4:107631799:-	4:107631759:-	4:107614269:-	4:107614207:-	4:107614122:-	4:107614019:-	4:107613870:-	4:107613697:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq bXBqJigD9oV3 f6YSioLdAWpr Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 f6YSioLdAWpr Yfn77uLS5tv8	KTLz8piFYdwC BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6 Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6 Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	jaSvBXBkn3xs YkSG92k4EHDM	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP	3kRDPWwiRCgi L6w2k2VEv4EY	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	3kRDPWwiRCgi L6w2k2VEv4EY	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	3kRDPWwiRCgi L6w2k2VEv4EY	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Mk6ShCGm6RBJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8