General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000330852
Gene ID:	ENSG00000157869
Gene Name:	RAB28
Sequence (UNICHARACTER ENCODING)	GCAGAGGGCGGGGAGGUGGGCAAGAUGGCGCUUGCCGAGUGAUUCUCCUCGAAUACCUCCUGCCGGCGCGGAGACACCGGGGCGGGGGUCCUGCCGCAACUACCUCCCUUCCUCCUCUCCCCCGCCCCCGGAGCCUUCAPCCUUCCCUUCCCCCCCCACCUCGAGGGGCGGGCCUGGUUCCCGGGACACCAUGUCGGЖCUCUGAGGAGGAGAGCCAGGACCGGCAACUGAAAAUCGUCGUGCUGGGGGACGGCGCCUCCGGGAAGACCUCCUUAACUACGUGUUUUGCUCAAGAAACUUUUGGGAAACAGUACAAACAAACUAUAGGACUGGAUUUCUUUUUGAGAAGGAUAACAUUGCCAGGAAACUUGAAUGUUACCCUUCAAAUUUGGGAUAUAGGAGGGCAGACAAUAGGAGGCAAAAUGUUGGAUAAAUAUAUCUAUGGAGCACAGGGAGUCCUCUUGGUAUAUGAUAUUACAAAUUAUCAAAGCUUUGAGAAUUUAGAAGAUUGGUAUACUGUGGUGAAGAAAGUGAGCGAGGAGUCAGAAACUCAGCCACUGGUUGCCUUGGUAGGCAAUAAAAUUGAUUUGGAGCAUAUGCGAACAAUAAAACCUGAAAAACACUUACGGUUUUGCCAGGAAAAUGGUUUUAGUAGCCACUUUGUCUCAGCCAAGACAGGAGACUCUGUCUUCCUGUGCUUUCAGAAAGUUGCUGCUGAAAUCCUUGGGAUCAAAUUAAACAAAGCAGAAAUAGAЖCAGUCACAGAGGGUGGUGAAGGCAGAUAUUGUAAACUACAACCAGGAACCUAUGUCAAGGЖCUGUUAACCCUCCUAGAAGCUCUAUGUGUGCAGUUCAGUGAGCGCAUUUUUCUUUUGUGUUGAUAGUUCUGGCUGCCCUUCACCUCUGGGUGGGCCCGAGGЖCUUCUAGGAЖCUUGUUUUAUCAGUGACCAUCUCUGUAGUUCAGUUAACACUPUACUCCCAACUUGCUUCAUCAUUGCUAUUGCCUCACAGUGGCAGGCAGCUCCUUGGAUPUGAAAGAAUUCAACUUUGGGACCACACACUUUGAAUUCAAAAUGGAAAACCCAUUCCCUGGAAUUAGЖCUGCUUCAUUGCAAAAGAAUGAUGUUGUUUCUUUGUAUGUCCUUGCUUCUUUUUUCAUUGAUGUAAAUUUUUUUAЖCUUAAUAUGAAAACUCUCCAAGUCUUGAUCAUCAGCCAGGAUUUUGCCACAGCAAUUUCAUUCUCUUAUCGGAACUUGUAUGUGUCAAAGUAUACUUCAGAGUGCAAЖCAUUAAGCAAGUAAUAUAUUUUACCUACAGAUACUUAUGAAGACAUUCUUUCGCUAUCGUGAGUAAAAGUAUAUAAAGCUGUUUCUAACUGAAAAUGCUUGAAAUAAGCCUGUAAUAGAAAUAUUUUUUCAUUUUUUAAAAAAGGGCCUAAAUUGUUUAUAUUGUAGUUUGUAЖCUCACAAAGUAAUAUUUGAUAUUGUAUUUUUAUUACUGUAUCGUUGUCGUUAUGUAUUGUGUAAUACUCAGGUUUGAAGGCUUUCUGAAUUCUGAUAAAUGUUCAGCUGAUGCUCCACGUGGAAUUUCUCUUGCAAACUGCAUAAGAGUACUCCCGAGAAUGAGUUAUGACAUUGUGGAUCAGACUGUACCUGAUGUUCAGAUGUUUUUCUUUCACAAAUAAACUUAUUUAAAUUA
Sequence (SHORT NAMES ENCODING)	GCAGAGGGCGGGGAGGUGGGCAAGAUGGCGCUUGCCGAGUGAUUCUCCUCGAAUACCUCCUGCCGGCGCGGAGACACCGGGGCGGGGGUCCUGCCGCAACUACCUCCCUUCCUCCUCUCCCCCGCCCCCGGAGCCUUCAYCCUUCCCUUCCCCCCCCACCUCGAGGGGCGGGCCUGGUUCCCGGGACACCAUGUCGGm6ACUCUGAGGAGGAGAGCCAGGACCGGCAACUGAAAAUCGUCGUGCUGGGGGACGGCGCCUCCGGGAAGACCUCCUUAACUACGUGUUUUGCUCAAGAAACUUUUGGGAAACAGUACAAACAAACUAUAGGACUGGAUUUCUUUUUGAGAAGGAUAACAUUGCCAGGAAACUUGAAUGUUACCCUUCAAAUUUGGGAUAUAGGAGGGCAGACAAUAGGAGGCAAAAUGUUGGAUAAAUAUAUCUAUGGAGCACAGGGAGUCCUCUUGGUAUAUGAUAUUACAAAUUAUCAAAGCUUUGAGAAUUUAGAAGAUUGGUAUACUGUGGUGAAGAAAGUGAGCGAGGAGUCAGAAACUCAGCCACUGGUUGCCUUGGUAGGCAAUAAAAUUGAUUUGGAGCAUAUGCGAACAAUAAAACCUGAAAAACACUUACGGUUUUGCCAGGAAAAUGGUUUUAGUAGCCACUUUGUCUCAGCCAAGACAGGAGACUCUGUCUUCCUGUGCUUUCAGAAAGUUGCUGCUGAAAUCCUUGGGAUCAAAUUAAACAAAGCAGAAAUAGAm6ACAGUCACAGAGGGUGGUGAAGGCAGAUAUUGUAAACUACAACCAGGAACCUAUGUCAAGGm6ACUGUUAACCCUCCUAGAAGCUCUAUGUGUGCAGUUCAGUGAGCGCAUUUUUCUUUUGUGUUGAUAGUUCUGGCUGCCCUUCACCUCUGGGUGGGCCCGAGGm6ACUUCUAGGAm6ACUUGUUUUAUCAGUGACCAUCUCUGUAGUUCAGUUAACACUYUACUCCCAACUUGCUUCAUCAUUGCUAUUGCCUCACAGUGGCAGGCAGCUCCUUGGAUYUGAAAGAAUUCAACUUUGGGACCACACACUUUGAAUUCAAAAUGGAAAACCCAUUCCCUGGAAUUAGm6ACUGCUUCAUUGCAAAAGAAUGAUGUUGUUUCUUUGUAUGUCCUUGCUUCUUUUUUCAUUGAUGUAAAUUUUUUUAm6ACUUAAUAUGAAAACUCUCCAAGUCUUGAUCAUCAGCCAGGAUUUUGCCACAGCAAUUUCAUUCUCUUAUCGGAACUUGUAUGUGUCAAAGUAUACUUCAGAGUGCAAm6ACAUUAAGCAAGUAAUAUAUUUUACCUACAGAUACUUAUGAAGACAUUCUUUCGCUAUCGUGAGUAAAAGUAUAUAAAGCUGUUUCUAACUGAAAAUGCUUGAAAUAAGCCUGUAAUAGAAAUAUUUUUUCAUUUUUUAAAAAAGGGCCUAAAUUGUUUAUAUUGUAGUUUGUAm6ACUCACAAAGUAAUAUUUGAUAUUGUAUUUUUAUUACUGUAUCGUUGUCGUUAUGUAUUGUGUAAUACUCAGGUUUGAAGGCUUUCUGAAUUCUGAUAAAUGUUCAGCUGAUGCUCCACGUGGAAUUUCUCUUGCAAACUGCAUAAGAGUACUCCCGAGAAUGAGUUAUGACAUUGUGGAUCAGACUGUACCUGAUGUUCAGAUGUUUUUCUUUCACAAAUAAACUUAUUUAAAUUA
Sequence (MODOMICS CODE ENCODING)	GCAGAGGGCGGGGAGGUGGGCAAGAUGGCGCUUGCCGAGUGAUUCUCCUCGAAUACCUCCUGCCGGCGCGGAGACACCGGGGCGGGGGUCCUGCCGCAACUACCUCCCUUCCUCCUCUCCCCCGCCCCCGGAGCCUUCA2000000009UCCUUCCCUUCCCCCCCCACCUCGAGGGGCGGGCCUGGUUCCCGGGACACCAUGUCGG2000000006ACUCUGAGGAGGAGAGCCAGGACCGGCAACUGAAAAUCGUCGUGCUGGGGGACGGCGCCUCCGGGAAGACCUCCUUAACUACGUGUUUUGCUCAAGAAACUUUUGGGAAACAGUACAAACAAACUAUAGGACUGGAUUUCUUUUUGAGAAGGAUAACAUUGCCAGGAAACUUGAAUGUUACCCUUCAAAUUUGGGAUAUAGGAGGGCAGACAAUAGGAGGCAAAAUGUUGGAUAAAUAUAUCUAUGGAGCACAGGGAGUCCUCUUGGUAUAUGAUAUUACAAAUUAUCAAAGCUUUGAGAAUUUAGAAGAUUGGUAUACUGUGGUGAAGAAAGUGAGCGAGGAGUCAGAAACUCAGCCACUGGUUGCCUUGGUAGGCAAUAAAAUUGAUUUGGAGCAUAUGCGAACAAUAAAACCUGAAAAACACUUACGGUUUUGCCAGGAAAAUGGUUUUAGUAGCCACUUUGUCUCAGCCAAGACAGGAGACUCUGUCUUCCUGUGCUUUCAGAAAGUUGCUGCUGAAAUCCUUGGGAUCAAAUUAAACAAAGCAGAAAUAGA2000000006ACAGUCACAGAGGGUGGUGAAGGCAGAUAUUGUAAACUACAACCAGGAACCUAUGUCAAGG2000000006ACUGUUAACCCUCCUAGAAGCUCUAUGUGUGCAGUUCAGUGAGCGCAUUUUUCUUUUGUGUUGAUAGUUCUGGCUGCCCUUCACCUCUGGGUGGGCCCGAGG2000000006ACUUCUAGGA2000000006ACUUGUUUUAUCAGUGACCAUCUCUGUAGUUCAGUUAACACU2000000009UUACUCCCAACUUGCUUCAUCAUUGCUAUUGCCUCACAGUGGCAGGCAGCUCCUUGGAU2000000009UUGAAAGAAUUCAACUUUGGGACCACACACUUUGAAUUCAAAAUGGAAAACCCAUUCCCUGGAAUUAG2000000006ACUGCUUCAUUGCAAAAGAAUGAUGUUGUUUCUUUGUAUGUCCUUGCUUCUUUUUUCAUUGAUGUAAAUUUUUUUA2000000006ACUUAAUAUGAAAACUCUCCAAGUCUUGAUCAUCAGCCAGGAUUUUGCCACAGCAAUUUCAUUCUCUUAUCGGAACUUGUAUGUGUCAAAGUAUACUUCAGAGUGCAA2000000006ACAUUAAGCAAGUAAUAUAUUUUACCUACAGAUACUUAUGAAGACAUUCUUUCGCUAUCGUGAGUAAAAGUAUAUAAAGCUGUUUCUAACUGAAAAUGCUUGAAAUAAGCCUGUAAUAGAAAUAUUUUUUCAUUUUUUAAAAAAGGGCCUAAAUUGUUUAUAUUGUAGUUUGUA2000000006ACUCACAAAGUAAUAUUUGAUAUUGUAUUUUUAUUACUGUAUCGUUGUCGUUAUGUAUUGUGUAAUACUCAGGUUUGAAGGCUUUCUGAAUUCUGAUAAAUGUUCAGCUGAUGCUCCACGUGGAAUUUCUCUUGCAAACUGCAUAAGAGUACUCCCGAGAAUGAGUUAUGACAUUGUGGAUCAGACUGUACCUGAUGUUCAGAUGUUUUUCUUUCACAAAUAAACUUAUUUAAAUUA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	140	198	754	815	917	927	969	1028	1096	1172	1280	1454
Modification Positions	Y	m6A	m6A	m6A	m6A	m6A	Y	Y	m6A	m6A	m6A	m6A
Genomic Coordinates	4:13484201:-	4:13484143:-	4:13376554:-	4:13368599:-	4:13368497:-	4:13368487:-	4:13368445:-	4:13368386:-	4:13368318:-	4:13368242:-	4:13368134:-	4:13367960:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq Yfn77uLS5tv8	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	4HMi5ykupT9V 5aTkEfEpX8Xm 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H QmcpiJ88DBDn QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 93arJtwJmuS9 BkoLW2CBToyL BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq XWZVGdLC6gGJ S9vNeQQYrhac Yfn77uLS5tv8	6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H QmcpiJ88DBDn QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 93arJtwJmuS9 BkoLW2CBToyL WiQcrNTGZHPT BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq dknfVe6BK8aP XWZVGdLC6gGJ S9vNeQQYrhac Yfn77uLS5tv8	Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq dknfVe6BK8aP XWZVGdLC6gGJ S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq XWZVGdLC6gGJ S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP XWZVGdLC6gGJ S9vNeQQYrhac Yfn77uLS5tv8	6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 93arJtwJmuS9 BkoLW2CBToyL BsCW7emuRX7M KENzb7mwdBd9 Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq dknfVe6BK8aP XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP XWZVGdLC6gGJ S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP kx7BHU7ZycYE XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP kx7BHU7ZycYE oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8