General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000274054
Gene ID:	ENSG00000145414
Gene Name:	NAF1
Sequence (UNICHARACTER ENCODING)	GUGUCUUUUGGCUCCUCCGCGUGUAGUUACCUGAGAAACGCGGGAAGUUGGGCCCAGGCAGUGUUGCUGCGGUUGCCUAAGUUGUUUUUCUAUUUCUGGAGAGAGCCGUGAGCUUGUCCAGGGGCCCCAAUCCUGAGGCCGACCCGGUUUCUGGCGCGGUGCGAUGGAGGUAGUGGAGGCCGCCGCCGCUCAGCUGGAAACUCUGAAAUUCAAUGGCACCGACUUUGGAGUUGGGGAAGGUCCGGCGGCUCCGUCUCCGGGCUCUGCCCCUGUGCCAGGGACACAGCCGCCGCUACAGUCGUUUGAGGGGUCCCCGGACGCUGGGCAGACCGUGGAGGUUAAGCCUGCCGGGGAGCAGCCUCUGCAGCCCGUUCUGAACGCCGUCGCGGCCGGGACCCCGGCGCCGCAGCCACAGCCACCGGCUGAAUCGCCGGCCUGCGGAGACUGCGUCACCUCCCCAGGAGCCGCAGAGCCUGCGCGGGCGCCGGACUCCUUGGAGACCUCGGACUCGGAUUCGGACUCGGACAGUGAAACAGAUUCAGAUAGUUCAAGUUCAUCGUCUUCCUCUUCAUCUUCCUCAUCGUCGUCUUCUUCCUCUUGUAUAUCACUUCCUCCAGUGCUGUCAGAUGGAGAUGAUGAUUUACAAAUUGAGAAGGAAAAUAAGAAUUUUCCUCUUAAAACAAAAGAUGAAUUACUUCUUAAUGAACUGCCUUCUGUUGAAGAACUCACUAUUAUUCUGCCUGAAGAUAUUGAGUUAAAGCCUCUUGGGAUGGUUUCAAGUAUUAUUGAACAACUAGUAAUAAUUGAAUCUAUGACUAACCUACCUCCAGUUAAUGAGGAGACUGUAAUUUUUAAAAGUGAUCGACAAGCAGCAGGAAAGAUAUUCGAGAUAUUUGGACCUGUUGCACAPCCAUUUUAUGUGUUACGGUUUAAUUCUUCAGAUCACAUUGAGAGUAAAGGUAUUAAAAUAAAGGAGACUAUGUAUUUUGCUCCAUCAAUGAAAGAUUUCACUCAAUAUAUAUUCACAGAAAAACUAAAACAGGAUAAGGGAUCAGAUGCAUCAUGGAAGAAUGAUCAGGAЖCCACCACCAGAGGCCUUAGAUUUUAGUGAUGAUGAAAAAGAGAAGGAAGCCAAACAGAGGAAAAAAUCUCAGAUUCAAGGCCGGAAAAAACUCAAAUCUGAAUUUAAUGAGCCUGGUGAAGAUUUUACUGAAGUACAUCAGAAUUGGAAUGCUCAUAGCUCUGCUUCAGAGCAUGCAAAAGGAUAUCGUAACAGAGAAUUCACACGAGGAUUUUCCAGGGCCAGAUACCCUCGAUCUUGCCAUGGCAGGCCUCCACCUCAGCAUUUCUAUAЖCUCAGAACAUAUGGUAUCUCAGGAGACUUCAGGAUUUCCUUCUCAGAGЖCAAAAUAAUCCCAUUAUGCCACAAUACCCCUUUCCUCUUCCAGUGUUUGACAUGCAUAAUUUUCCCCUCCGCCCUCCACCCCCACCACCACCCCCACCUGUAAЖCAUGGGUUGGGCUACACCAAACAUGGCUGCUCAPCCAUUACUUAЖCUUACCAUACUCCCUACCCCCACCCCCUCCCCCPCCACCACUGCCUCCUCCACCCUCUUCUGGAGAUAGUAAUUCUCAUUUUGGЖCCUUACUAUUAGGUGACUAUGCAUUUCCAGAGAAAUGUGGЖCUUUUCAUAUUAUGUGGUAAGGAUUUUUUUUUUUCAAGAGUGAUUAUGGAGCUAGAUUUUUAAAAACACUGUAAAAUACUAAAUGAUUCCUUCUGUUGUAAGUUGAUAUAUAUUUGUAACCUUUGUGAAAUUGUAUUCAUAUGAAAAUGUCAGCUCAAAUUCUUGGGAGAACAUUAAAUUAUGUAAUAUUUAAUUAAAA
Sequence (SHORT NAMES ENCODING)	GUGUCUUUUGGCUCCUCCGCGUGUAGUUACCUGAGAAACGCGGGAAGUUGGGCCCAGGCAGUGUUGCUGCGGUUGCCUAAGUUGUUUUUCUAUUUCUGGAGAGAGCCGUGAGCUUGUCCAGGGGCCCCAAUCCUGAGGCCGACCCGGUUUCUGGCGCGGUGCGAUGGAGGUAGUGGAGGCCGCCGCCGCUCAGCUGGAAACUCUGAAAUUCAAUGGCACCGACUUUGGAGUUGGGGAAGGUCCGGCGGCUCCGUCUCCGGGCUCUGCCCCUGUGCCAGGGACACAGCCGCCGCUACAGUCGUUUGAGGGGUCCCCGGACGCUGGGCAGACCGUGGAGGUUAAGCCUGCCGGGGAGCAGCCUCUGCAGCCCGUUCUGAACGCCGUCGCGGCCGGGACCCCGGCGCCGCAGCCACAGCCACCGGCUGAAUCGCCGGCCUGCGGAGACUGCGUCACCUCCCCAGGAGCCGCAGAGCCUGCGCGGGCGCCGGACUCCUUGGAGACCUCGGACUCGGAUUCGGACUCGGACAGUGAAACAGAUUCAGAUAGUUCAAGUUCAUCGUCUUCCUCUUCAUCUUCCUCAUCGUCGUCUUCUUCCUCUUGUAUAUCACUUCCUCCAGUGCUGUCAGAUGGAGAUGAUGAUUUACAAAUUGAGAAGGAAAAUAAGAAUUUUCCUCUUAAAACAAAAGAUGAAUUACUUCUUAAUGAACUGCCUUCUGUUGAAGAACUCACUAUUAUUCUGCCUGAAGAUAUUGAGUUAAAGCCUCUUGGGAUGGUUUCAAGUAUUAUUGAACAACUAGUAAUAAUUGAAUCUAUGACUAACCUACCUCCAGUUAAUGAGGAGACUGUAAUUUUUAAAAGUGAUCGACAAGCAGCAGGAAAGAUAUUCGAGAUAUUUGGACCUGUUGCACAYCCAUUUUAUGUGUUACGGUUUAAUUCUUCAGAUCACAUUGAGAGUAAAGGUAUUAAAAUAAAGGAGACUAUGUAUUUUGCUCCAUCAAUGAAAGAUUUCACUCAAUAUAUAUUCACAGAAAAACUAAAACAGGAUAAGGGAUCAGAUGCAUCAUGGAAGAAUGAUCAGGAm6ACCACCACCAGAGGCCUUAGAUUUUAGUGAUGAUGAAAAAGAGAAGGAAGCCAAACAGAGGAAAAAAUCUCAGAUUCAAGGCCGGAAAAAACUCAAAUCUGAAUUUAAUGAGCCUGGUGAAGAUUUUACUGAAGUACAUCAGAAUUGGAAUGCUCAUAGCUCUGCUUCAGAGCAUGCAAAAGGAUAUCGUAACAGAGAAUUCACACGAGGAUUUUCCAGGGCCAGAUACCCUCGAUCUUGCCAUGGCAGGCCUCCACCUCAGCAUUUCUAUAm6ACUCAGAACAUAUGGUAUCUCAGGAGACUUCAGGAUUUCCUUCUCAGAGm6ACAAAAUAAUCCCAUUAUGCCACAAUACCCCUUUCCUCUUCCAGUGUUUGACAUGCAUAAUUUUCCCCUCCGCCCUCCACCCCCACCACCACCCCCACCUGUAAm6ACAUGGGUUGGGCUACACCAAACAUGGCUGCUCAYCCAUUACUUAm6ACUUACCAUACUCCCUACCCCCACCCCCUCCCCCYCCACCACUGCCUCCUCCACCCUCUUCUGGAGAUAGUAAUUCUCAUUUUGGm6ACCUUACUAUUAGGUGACUAUGCAUUUCCAGAGAAAUGUGGm6ACUUUUCAUAUUAUGUGGUAAGGAUUUUUUUUUUUCAAGAGUGAUUAUGGAGCUAGAUUUUUAAAAACACUGUAAAAUACUAAAUGAUUCCUUCUGUUGUAAGUUGAUAUAUAUUUGUAACCUUUGUGAAAUUGUAUUCAUAUGAAAAUGUCAGCUCAAAUUCUUGGGAGAACAUUAAAUUAUGUAAUAUUUAAUUAAAA
Sequence (MODOMICS CODE ENCODING)	GUGUCUUUUGGCUCCUCCGCGUGUAGUUACCUGAGAAACGCGGGAAGUUGGGCCCAGGCAGUGUUGCUGCGGUUGCCUAAGUUGUUUUUCUAUUUCUGGAGAGAGCCGUGAGCUUGUCCAGGGGCCCCAAUCCUGAGGCCGACCCGGUUUCUGGCGCGGUGCGAUGGAGGUAGUGGAGGCCGCCGCCGCUCAGCUGGAAACUCUGAAAUUCAAUGGCACCGACUUUGGAGUUGGGGAAGGUCCGGCGGCUCCGUCUCCGGGCUCUGCCCCUGUGCCAGGGACACAGCCGCCGCUACAGUCGUUUGAGGGGUCCCCGGACGCUGGGCAGACCGUGGAGGUUAAGCCUGCCGGGGAGCAGCCUCUGCAGCCCGUUCUGAACGCCGUCGCGGCCGGGACCCCGGCGCCGCAGCCACAGCCACCGGCUGAAUCGCCGGCCUGCGGAGACUGCGUCACCUCCCCAGGAGCCGCAGAGCCUGCGCGGGCGCCGGACUCCUUGGAGACCUCGGACUCGGAUUCGGACUCGGACAGUGAAACAGAUUCAGAUAGUUCAAGUUCAUCGUCUUCCUCUUCAUCUUCCUCAUCGUCGUCUUCUUCCUCUUGUAUAUCACUUCCUCCAGUGCUGUCAGAUGGAGAUGAUGAUUUACAAAUUGAGAAGGAAAAUAAGAAUUUUCCUCUUAAAACAAAAGAUGAAUUACUUCUUAAUGAACUGCCUUCUGUUGAAGAACUCACUAUUAUUCUGCCUGAAGAUAUUGAGUUAAAGCCUCUUGGGAUGGUUUCAAGUAUUAUUGAACAACUAGUAAUAAUUGAAUCUAUGACUAACCUACCUCCAGUUAAUGAGGAGACUGUAAUUUUUAAAAGUGAUCGACAAGCAGCAGGAAAGAUAUUCGAGAUAUUUGGACCUGUUGCACA2000000009UCCAUUUUAUGUGUUACGGUUUAAUUCUUCAGAUCACAUUGAGAGUAAAGGUAUUAAAAUAAAGGAGACUAUGUAUUUUGCUCCAUCAAUGAAAGAUUUCACUCAAUAUAUAUUCACAGAAAAACUAAAACAGGAUAAGGGAUCAGAUGCAUCAUGGAAGAAUGAUCAGGA2000000006ACCACCACCAGAGGCCUUAGAUUUUAGUGAUGAUGAAAAAGAGAAGGAAGCCAAACAGAGGAAAAAAUCUCAGAUUCAAGGCCGGAAAAAACUCAAAUCUGAAUUUAAUGAGCCUGGUGAAGAUUUUACUGAAGUACAUCAGAAUUGGAAUGCUCAUAGCUCUGCUUCAGAGCAUGCAAAAGGAUAUCGUAACAGAGAAUUCACACGAGGAUUUUCCAGGGCCAGAUACCCUCGAUCUUGCCAUGGCAGGCCUCCACCUCAGCAUUUCUAUA2000000006ACUCAGAACAUAUGGUAUCUCAGGAGACUUCAGGAUUUCCUUCUCAGAG2000000006ACAAAAUAAUCCCAUUAUGCCACAAUACCCCUUUCCUCUUCCAGUGUUUGACAUGCAUAAUUUUCCCCUCCGCCCUCCACCCCCACCACCACCCCCACCUGUAA2000000006ACAUGGGUUGGGCUACACCAAACAUGGCUGCUCA2000000009UCCAUUACUUA2000000006ACUUACCAUACUCCCUACCCCCACCCCCUCCCCC2000000009UCCACCACUGCCUCCUCCACCCUCUUCUGGAGAUAGUAAUUCUCAUUUUGG2000000006ACCUUACUAUUAGGUGACUAUGCAUUUCCAGAGAAAUGUGG2000000006ACUUUUCAUAUUAUGUGGUAAGGAUUUUUUUUUUUCAAGAGUGAUUAUGGAGCUAGAUUUUUAAAAACACUGUAAAAUACUAAAUGAUUCCUUCUGUUGUAAGUUGAUAUAUAUUUGUAACCUUUGUGAAAUUGUAUUCAUAUGAAAAUGUCAGCUCAAAUUCUUGGGAGAACAUUAAAUUAUGUAAUAUUUAAUUAAAA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	910	1081	1353	1402	1506	1540	1551	1585	1636	1677
Modification Positions	Y	m6A	m6A	m6A	m6A	Y	m6A	Y	m6A	m6A
Genomic Coordinates	4:163140354:-	4:163137211:-	4:163129192:-	4:163129143:-	4:163129039:-	4:163129005:-	4:163128994:-	4:163128960:-	4:163128909:-	4:163128868:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq bXBqJigD9oV3 Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 Yfn77uLS5tv8	msuJfBpJvM5H Q36pf44ZRvxu QpiKdbVikVz2 VyCX26p5UBRL BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Yfn77uLS5tv8	6UuHp6YApVKv aivdrAsbdKEU gZuvgwMuBfgh msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 8cMbzB4aD5Se BsCW7emuRX7M Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn WiQcrNTGZHPT Lny8GcCeVGc9 BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	4HMi5ykupT9V 5aTkEfEpX8Xm msuJfBpJvM5H VyCX26p5UBRL 8cMbzB4aD5Se KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 PF5iqBNSbHaa UKen6WEino9G BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8