General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000563781
Gene ID:	ENSG00000051108
Gene Name:	HERPUD1
Sequence (UNICHARACTER ENCODING)	AAGUACCUUCGUAUUACUUUUAGCAGGAAAAACGGCAUGUUUUGCAUCUGGUGUGCAAUGUGAAGAGUCCUUCAAAAAUGCCAGAAAUCAACGCCAAGGUGGCUGAAUCCACAGAGGAGCCUGCUGGUUCUAAUCGGGGACAGUAUCCUGAGGAUUCCUCAAGUGAUGGUUUAAGGCAAAGGGAAGUUCUUCGGAACCUUUCUUCCCCUGGAUGGGAAAACAUCUCAAGGCCUGAAGCUGCCCAGCAGGCAUUCCAAGGCCUGGGUCCUGGUUUCUCCGGUUACACACCCUAUGGGUGGCUUCAGCUUUCCUGGUUCCAGCAGAUAUAUGCACGACAGUACUACAUGCAAUAUUUAGCAGCCACUGCUGCAUCAGGGGCUUUUGUUCCACCACCAAGUGCACAAGAGAUACCUGUGGUCUCUGCACCUGCUCCAGCCCCUAUUCACAACCAGUUUCCAGCUGAAAACCAGCCUGCCAAUCAGAAUGCUGCUCCUCAAGUGGUUGUUAAUCCUGGAGCCAAUCAAAAUUUGCGGAUGAAUGCACAAGGUGGCCCUAUUGUGGAAGAAGAUGAUGAAAUAAAUCGAGAUUGGUUGGAUUGGЖCCUAUUCAGCAGCUACЖUUUUCUGUUUUUCUCAGUAUCCUCUACUUCUACUCCUCCCUGAGCAGAUUCCUCAUGGUCAUGGGGGCCACCGUUGUUAUGUACCUGCAUCACGUUGGGUGGUUUCCAUUUAGЖCCGAGGCCGGUPCAGAACUUCCCAAAUGAUGGUCCUCCUCCUG
Sequence (SHORT NAMES ENCODING)	AAGUACCUUCGUAUUACUUUUAGCAGGAAAAACGGCAUGUUUUGCAUCUGGUGUGCAAUGUGAAGAGUCCUUCAAAAAUGCCAGAAAUCAACGCCAAGGUGGCUGAAUCCACAGAGGAGCCUGCUGGUUCUAAUCGGGGACAGUAUCCUGAGGAUUCCUCAAGUGAUGGUUUAAGGCAAAGGGAAGUUCUUCGGAACCUUUCUUCCCCUGGAUGGGAAAACAUCUCAAGGCCUGAAGCUGCCCAGCAGGCAUUCCAAGGCCUGGGUCCUGGUUUCUCCGGUUACACACCCUAUGGGUGGCUUCAGCUUUCCUGGUUCCAGCAGAUAUAUGCACGACAGUACUACAUGCAAUAUUUAGCAGCCACUGCUGCAUCAGGGGCUUUUGUUCCACCACCAAGUGCACAAGAGAUACCUGUGGUCUCUGCACCUGCUCCAGCCCCUAUUCACAACCAGUUUCCAGCUGAAAACCAGCCUGCCAAUCAGAAUGCUGCUCCUCAAGUGGUUGUUAAUCCUGGAGCCAAUCAAAAUUUGCGGAUGAAUGCACAAGGUGGCCCUAUUGUGGAAGAAGAUGAUGAAAUAAAUCGAGAUUGGUUGGAUUGGm6ACCUAUUCAGCAGCUACm6AUUUUCUGUUUUUCUCAGUAUCCUCUACUUCUACUCCUCCCUGAGCAGAUUCCUCAUGGUCAUGGGGGCCACCGUUGUUAUGUACCUGCAUCACGUUGGGUGGUUUCCAUUUAGm6ACCGAGGCCGGUYCAGAACUUCCCAAAUGAUGGUCCUCCUCCUG
Sequence (MODOMICS CODE ENCODING)	AAGUACCUUCGUAUUACUUUUAGCAGGAAAAACGGCAUGUUUUGCAUCUGGUGUGCAAUGUGAAGAGUCCUUCAAAAAUGCCAGAAAUCAACGCCAAGGUGGCUGAAUCCACAGAGGAGCCUGCUGGUUCUAAUCGGGGACAGUAUCCUGAGGAUUCCUCAAGUGAUGGUUUAAGGCAAAGGGAAGUUCUUCGGAACCUUUCUUCCCCUGGAUGGGAAAACAUCUCAAGGCCUGAAGCUGCCCAGCAGGCAUUCCAAGGCCUGGGUCCUGGUUUCUCCGGUUACACACCCUAUGGGUGGCUUCAGCUUUCCUGGUUCCAGCAGAUAUAUGCACGACAGUACUACAUGCAAUAUUUAGCAGCCACUGCUGCAUCAGGGGCUUUUGUUCCACCACCAAGUGCACAAGAGAUACCUGUGGUCUCUGCACCUGCUCCAGCCCCUAUUCACAACCAGUUUCCAGCUGAAAACCAGCCUGCCAAUCAGAAUGCUGCUCCUCAAGUGGUUGUUAAUCCUGGAGCCAAUCAAAAUUUGCGGAUGAAUGCACAAGGUGGCCCUAUUGUGGAAGAAGAUGAUGAAAUAAAUCGAGAUUGGUUGGAUUGG2000000006ACCUAUUCAGCAGCUAC2000000006AUUUUCUGUUUUUCUCAGUAUCCUCUACUUCUACUCCUCCCUGAGCAGAUUCCUCAUGGUCAUGGGGGCCACCGUUGUUAUGUACCUGCAUCACGUUGGGUGGUUUCCAUUUAG2000000006ACCGAGGCCGGU2000000009UCAGAACUUCCCAAAUGAUGGUCCUCCUCCUG

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	600	617	731	743
Modification Positions	m6A	m6A	m6A	Um
Genomic Coordinates	16:56940142:+	16:56940159:+	16:56942159:+	16:56942171:+
Level of Experimental Evidence	3	3	3	3
Level of Experimental Reliability	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek jNkxUQNx8GRd msuJfBpJvM5H Q36pf44ZRvxu QmcpiJ88DBDn UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U D6ncpa2PPWj3 8cMbzB4aD5Se ArijeGVTwYBw KTLz8piFYdwC BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G XUkp6ghERQML 834aFpha8RvT dA7YoLwHrzgR JASnTTw2HeNE ksEP666umrV9 NKGM8wdLLrnu ZuM5xpZmNuDL BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	3kRDPWwiRCgi L6w2k2VEv4EY	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	jaSvBXBkn3xs YkSG92k4EHDM