General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000564828
Gene ID:	ENSG00000089486
Gene Name:	CDIP1
Sequence (UNICHARACTER ENCODING)	ACCGUGACGUCCCGGGCCUCGGCCCUGGUCCAAAGUCUACCCGCCUCCUUGUGACAGAAGUGCGACUGCCAGCUGCCGAGGCGUUCGGUCCUGCUGUUGCGGCCGCUGCCCCAGGGCUGCGGGGACGCUCCCGGAGCCCUGCCUGUUCCCUGUCCAUCCAGGCCAGCAGCUGAAGGAGCCUCACCUGCCUCCCUUCUCUGAGUAGCACGGAUUUGAGGCCGUUCCUCCCCAGCUGUGAUGCAGCCCCCUCCAGGCAUGCCACUGCCCCCUGCGGACAUUGGCCCCCCACCCUAUGAGCCGCCGGGUCACCCAAUGCCCCAGCCUGGCUUCAUCCCACCACACAUGAGUGCAGAUGGCACCUACAUGCCUCCGGAUGUGAUCUGGGCUGCUGCCUGAUCCCCUGCCUCAUCAAUGACUUCAAGGAUGUGACGCACACAUGCCCCAGCUGCAAAGCCUACAUCUACACGUACAAGCGCCUGUGCUAACGGAGCUGGGЖCUCGGGЖCUCCCCCGCCUGUCAGUCUGGCCCCCUGUGCUUUGCUCCCUGUGCUCAGUGGUCACUUUCCCGCUCCCACUUGGGGCUGGGAGCCGUGCCACCAUCCCCUAGAAGUCCUGUCCUCUUCACCCUGCCCUACCUGAGCCGCUGACUCUUCUGGCAAAAAUUCUGUUGGGAUUUAAGGCCAAGGGUCAGUGGGUGGCAGGGGGCUGЖCAAUGAGCUUGUGUGUUGUUGGUCUGCUUGGUGUGUGUGAUCGGGAAGAUAAGCUGGGAGGGGUCUCCUGCUGGGGUCCUGAUGCCUCUGUUUCCAAACAAGGUACAGGUUCAGUCCAGACUCUUUCCCCCUGGGACCAACAGCAGCCAGAGCAGUUAGCCAGUUAGUCCCCAGGCCUGUGGCCACAGGCGUUUCUGACCUGCUGGGCCGAGAAUGGGUAAGUUGUCUGGAGUCAGGUGGGCCCACGUAGGACAGGGUCACAAAGCCUGGGUUUGUUUCUGGGUACUUUGCGCCUCUGGGGUGCUAGAGGUGGGGCAUGGUGGCUGGAAGUAAAЖCUGCCAACUCUGGCCCUCAGAACUCUCAGGUAUAGAAGCCCAGGAUGUCUAAUACCCUGUCCCAGUGCCCGAGAGCUGCCUGGUGUCAGGUAGAGAGGACACUGUACCUGGGUGAAUGAUCAGACCCUGGUAGCUAAGAAGGAACUUGUCCCUUUGAGUCAGUGUGCAGACCCCCUUUCAGGCCAUGCCUCUGUGAACCCUGUAUUGCUGGGGCCGGAAGGAGCCCCUGAGCCUAGCCCCUUCCCGUCUGCCCUGUGUCCUCACUGCGUGUGGGUAUGACCUCUGCCUGGUGGCUGGUGUAUCCCAACUGGGCAAGAGAUGGCAGAGGGUCCCCCUUGUGGGUGCGCUUGGAUGUGCAGAGCCUUCUCCAUGGAUUUUCUUCCCUGUAAGUGCCGGGCCCCUCACCCCAGCUGACAGGCUGUUGCUGUGCCUGCUCACACCUGCUCCUGCAGGCACACUGGGCUAGGGACGAGGAAGGAGCAGCCACAAGUGGUAGAЖCUGCCUUGGUGGACACCAGCCUCGCCCUGUCUPUAUUUCCUGAAUGGUUUGUGAЖCUUGCUCACCUGGACCACUGUAUCCUGCCACUGUCCUUCCU
Sequence (SHORT NAMES ENCODING)	ACCGUGACGUCCCGGGCCUCGGCCCUGGUCCAAAGUCUACCCGCCUCCUUGUGACAGAAGUGCGACUGCCAGCUGCCGAGGCGUUCGGUCCUGCUGUUGCGGCCGCUGCCCCAGGGCUGCGGGGACGCUCCCGGAGCCCUGCCUGUUCCCUGUCCAUCCAGGCCAGCAGCUGAAGGAGCCUCACCUGCCUCCCUUCUCUGAGUAGCACGGAUUUGAGGCCGUUCCUCCCCAGCUGUGAUGCAGCCCCCUCCAGGCAUGCCACUGCCCCCUGCGGACAUUGGCCCCCCACCCUAUGAGCCGCCGGGUCACCCAAUGCCCCAGCCUGGCUUCAUCCCACCACACAUGAGUGCAGAUGGCACCUACAUGCCUCCGGAUGUGAUCUGGGCUGCUGCCUGAUCCCCUGCCUCAUCAAUGACUUCAAGGAUGUGACGCACACAUGCCCCAGCUGCAAAGCCUACAUCUACACGUACAAGCGCCUGUGCUAACGGAGCUGGGm6ACUCGGGm6ACUCCCCCGCCUGUCAGUCUGGCCCCCUGUGCUUUGCUCCCUGUGCUCAGUGGUCACUUUCCCGCUCCCACUUGGGGCUGGGAGCCGUGCCACCAUCCCCUAGAAGUCCUGUCCUCUUCACCCUGCCCUACCUGAGCCGCUGACUCUUCUGGCAAAAAUUCUGUUGGGAUUUAAGGCCAAGGGUCAGUGGGUGGCAGGGGGCUGm6ACAAUGAGCUUGUGUGUUGUUGGUCUGCUUGGUGUGUGUGAUCGGGAAGAUAAGCUGGGAGGGGUCUCCUGCUGGGGUCCUGAUGCCUCUGUUUCCAAACAAGGUACAGGUUCAGUCCAGACUCUUUCCCCCUGGGACCAACAGCAGCCAGAGCAGUUAGCCAGUUAGUCCCCAGGCCUGUGGCCACAGGCGUUUCUGACCUGCUGGGCCGAGAAUGGGUAAGUUGUCUGGAGUCAGGUGGGCCCACGUAGGACAGGGUCACAAAGCCUGGGUUUGUUUCUGGGUACUUUGCGCCUCUGGGGUGCUAGAGGUGGGGCAUGGUGGCUGGAAGUAAAm6ACUGCCAACUCUGGCCCUCAGAACUCUCAGGUAUAGAAGCCCAGGAUGUCUAAUACCCUGUCCCAGUGCCCGAGAGCUGCCUGGUGUCAGGUAGAGAGGACACUGUACCUGGGUGAAUGAUCAGACCCUGGUAGCUAAGAAGGAACUUGUCCCUUUGAGUCAGUGUGCAGACCCCCUUUCAGGCCAUGCCUCUGUGAACCCUGUAUUGCUGGGGCCGGAAGGAGCCCCUGAGCCUAGCCCCUUCCCGUCUGCCCUGUGUCCUCACUGCGUGUGGGUAUGACCUCUGCCUGGUGGCUGGUGUAUCCCAACUGGGCAAGAGAUGGCAGAGGGUCCCCCUUGUGGGUGCGCUUGGAUGUGCAGAGCCUUCUCCAUGGAUUUUCUUCCCUGUAAGUGCCGGGCCCCUCACCCCAGCUGACAGGCUGUUGCUGUGCCUGCUCACACCUGCUCCUGCAGGCACACUGGGCUAGGGACGAGGAAGGAGCAGCCACAAGUGGUAGAm6ACUGCCUUGGUGGACACCAGCCUCGCCCUGUCUYUAUUUCCUGAAUGGUUUGUGAm6ACUUGCUCACCUGGACCACUGUAUCCUGCCACUGUCCUUCCU
Sequence (MODOMICS CODE ENCODING)	ACCGUGACGUCCCGGGCCUCGGCCCUGGUCCAAAGUCUACCCGCCUCCUUGUGACAGAAGUGCGACUGCCAGCUGCCGAGGCGUUCGGUCCUGCUGUUGCGGCCGCUGCCCCAGGGCUGCGGGGACGCUCCCGGAGCCCUGCCUGUUCCCUGUCCAUCCAGGCCAGCAGCUGAAGGAGCCUCACCUGCCUCCCUUCUCUGAGUAGCACGGAUUUGAGGCCGUUCCUCCCCAGCUGUGAUGCAGCCCCCUCCAGGCAUGCCACUGCCCCCUGCGGACAUUGGCCCCCCACCCUAUGAGCCGCCGGGUCACCCAAUGCCCCAGCCUGGCUUCAUCCCACCACACAUGAGUGCAGAUGGCACCUACAUGCCUCCGGAUGUGAUCUGGGCUGCUGCCUGAUCCCCUGCCUCAUCAAUGACUUCAAGGAUGUGACGCACACAUGCCCCAGCUGCAAAGCCUACAUCUACACGUACAAGCGCCUGUGCUAACGGAGCUGGG2000000006ACUCGGG2000000006ACUCCCCCGCCUGUCAGUCUGGCCCCCUGUGCUUUGCUCCCUGUGCUCAGUGGUCACUUUCCCGCUCCCACUUGGGGCUGGGAGCCGUGCCACCAUCCCCUAGAAGUCCUGUCCUCUUCACCCUGCCCUACCUGAGCCGCUGACUCUUCUGGCAAAAAUUCUGUUGGGAUUUAAGGCCAAGGGUCAGUGGGUGGCAGGGGGCUG2000000006ACAAUGAGCUUGUGUGUUGUUGGUCUGCUUGGUGUGUGUGAUCGGGAAGAUAAGCUGGGAGGGGUCUCCUGCUGGGGUCCUGAUGCCUCUGUUUCCAAACAAGGUACAGGUUCAGUCCAGACUCUUUCCCCCUGGGACCAACAGCAGCCAGAGCAGUUAGCCAGUUAGUCCCCAGGCCUGUGGCCACAGGCGUUUCUGACCUGCUGGGCCGAGAAUGGGUAAGUUGUCUGGAGUCAGGUGGGCCCACGUAGGACAGGGUCACAAAGCCUGGGUUUGUUUCUGGGUACUUUGCGCCUCUGGGGUGCUAGAGGUGGGGCAUGGUGGCUGGAAGUAAA2000000006ACUGCCAACUCUGGCCCUCAGAACUCUCAGGUAUAGAAGCCCAGGAUGUCUAAUACCCUGUCCCAGUGCCCGAGAGCUGCCUGGUGUCAGGUAGAGAGGACACUGUACCUGGGUGAAUGAUCAGACCCUGGUAGCUAAGAAGGAACUUGUCCCUUUGAGUCAGUGUGCAGACCCCCUUUCAGGCCAUGCCUCUGUGAACCCUGUAUUGCUGGGGCCGGAAGGAGCCCCUGAGCCUAGCCCCUUCCCGUCUGCCCUGUGUCCUCACUGCGUGUGGGUAUGACCUCUGCCUGGUGGCUGGUGUAUCCCAACUGGGCAAGAGAUGGCAGAGGGUCCCCCUUGUGGGUGCGCUUGGAUGUGCAGAGCCUUCUCCAUGGAUUUUCUUCCCUGUAAGUGCCGGGCCCCUCACCCCAGCUGACAGGCUGUUGCUGUGCCUGCUCACACCUGCUCCUGCAGGCACACUGGGCUAGGGACGAGGAAGGAGCAGCCACAAGUGGUAGA2000000006ACUGCCUUGGUGGACACCAGCCUCGCCCUGUCU2000000009UUAUUUCCUGAAUGGUUUGUGA2000000006ACUUGCUCACCUGGACCACUGUAUCCUGCCACUGUCCUUCCU

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	496	503	707	1042	1540	1573	1595
Modification Positions	m6A	m6A	m6A	m6A	m6A	Y	m6A
Genomic Coordinates	16:4512561:-	16:4512554:-	16:4512350:-	16:4512015:-	16:4511517:-	16:4511484:-	16:4511462:-
Level of Experimental Evidence	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	3TeAZFYFxgvp 5aTkEfEpX8Xm 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn ArijeGVTwYBw Lny8GcCeVGc9 834aFpha8RvT dA7YoLwHrzgR ksEP666umrV9 BtsJQJ3DteUq dknfVe6BK8aP iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn KTLz8piFYdwC Lny8GcCeVGc9 UKen6WEino9G BtsJQJ3DteUq dknfVe6BK8aP iezFbUdmY3A6 Yfn77uLS5tv8	93arJtwJmuS9 BtsJQJ3DteUq dknfVe6BK8aP S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP iezFbUdmY3A6 JkWoGWVwjNda Yfn77uLS5tv8	3TeAZFYFxgvp 6UuHp6YApVKv aivdrAsbdKEU gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BtsJQJ3DteUq dknfVe6BK8aP XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 6UuHp6YApVKv gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 UKen6WEino9G BtsJQJ3DteUq dknfVe6BK8aP XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8