General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000204517
Gene ID:	ENSG00000090447
Gene Name:	TFAP4
Sequence (UNICHARACTER ENCODING)	AGACAUCUGAUCAGCUGCAAACACACACACACACACACACACACACACACACACACACACACACACACAUACACACGCCCGGGGAGGCAGGCCGGAGAGACCUCCCUCCCGCCCCUCCCGCCCGCCUCCCUCCCCUCGCCGCCGCCGCCGCCGCCAGCAUCUGGGACCGGCCGAUUCUGCACCUCCGUCCGGCGCUGCCCUUUGAUUCGGAUUUCCAUCUUGCAUUCUCCGGCUGAUCGCGGGACCUGGCUCGUGCAGAGGAGGGGGGCCGAUCGCUAUGGAGUAUUUCAUGGUGCCCACUCAGAAGGUGCCCUCUUUGCAACAUUUCAGGAAAACAGAGAAAGAAGUGAUAGGAGGGCUCUGUAGCCUUGCCAACAUUCCACUAACCCCCGAGACUCAGCGGGACCAGGAGCGGCGGAUUCGGCGGGAGAUCGCCAACAGCAACGAGCGGAGACGCAUGCAGAGCAUCAACGCGGGAUUCCAGUCCCUCAAGACCCUCAUCCCCCACACAGACGGAGAGAAGCUCAGCAAGGCAGCCAUUCUCCAGCAGACAGCCGAGUACAUCUUCUCCCUGGAGCAGGAGAAGACCAGGCUCUUGCAGCAGAACACACAGCUCAAGCGCUUCAUCCAGGAGCUGAGCGGCUCGUCCCCCAAGCGACGGCGGGCAGAGGACAAGGACGAAGGCAUAGGCUCCCCGGACAUCUGGGAGGACGAGAAGGCGGAGGACCUGCGGCGGGAGAUGAUUGAGCUGCGGCAGCAGCUGGACAAGGAGCGCUCGGUGCGCAUGAUGCUGGAGGAGCAGGUGCGCUCGCUGGAGGCCCACAUGUACCCGGAAAAGCUCAAGGUGAUUGCGCAGCAGGUGCAGCUGCAGCAGCAGCAGGAACAGGUGAGGCUGCUGCACCAGGAGAAGCUGGAGCGGGAЖCAGCAGCAGCUGCGGACCCAGCUUCUGCCCCCUCCGGCCCCCACCCACCACCCCACGGUGAUCGUGCCAGCACCGCCUCCUCCUCCCUCCCACCACAUCAAUGUCGUCACCAUGGGCCCCUCCUCGGUCAUCAACUCUGUUUCCACAPCCCGGCAAAAUCUGGACACCAUCGUGCAGGCAAUCCAGCACAUCGAGGGCACCCAGGAAAAGCAGGAGCUGGAGGAGGAGCAGCGGCGAGCUGUCAUCGUGAAGCCUGUCCGCAGCUGCCCGGAGGCCCCCACCUCUGACACCGCCUCCGACUCCGAGGCCUCAGACAGUGACGCCAUGGACCAGAGCCGGGAGGAGCCGUCGGGGGACGGGGAGCUUCCCUGACUACCCCCCCAGCCCPCCUCUCCCUUCUGGGGGCUGGAGGGAGCCGGGGCAGCCACAGGGAGAGACAUGGGCGAAUGAGUGAGAAAUUUUUACAAAAUUACGAUGUCAUUUGGGUCUCUUUUAUGACCUCUUUUUCAAUACUGUAAAUCGACCUUUGAACGAAGCCACUCAACCCGAGGUCCCGGGGCUGGGGUGUCGCAGAGCGUGUGGGAGCAUCGGCACCCCAGGGCGGGGCCUCGGCCCCGGGGGCUGGAGGAAGCUGACACGGAGAUGCCUGGCCUCUCUCUGCCAAAAAGCAUUUUUUCCUPUAAAUAUGUUUUUUAAGAACAGGGAAAAUUAAЖCAAAACCCCAGGUUAUUUCUUCCCUGCCCAGAGCCAGCCUGGGAUUGUCAGCCUUCAAUCCCCUUUCCUUCCUCUUUUUGGGUUUUCUUCUUUCUCCUPUAAGCACUUACAUGGUUGGGGGUAAGЖCUAGGCUGGGGCAUUCUGGGGGCCCGGAGGUCUCCGUUGCUUCUUGGUUGGGGUUUGCUGCUGCUGUGCCCCCCUCCCCCUUCCCCAUCUCGGCACUAGAAUUCGCCACUCUCCCACCCCCCAGCCCCCACCUCUGCCUCCAGGUCUCAUCUUCCACCCCAAAAAUGUCUGUCUCUCUCUUUUUGUUUUGUUUGUUGUUGGUUUUUUAUUUCUUUUUGGUUUGCUUUCUGUUUUUGUUUUGUUUUUCUUUUUUUUCUUUCUUUUUUUUUUUUUUUUACAAUUUUGAGGUCUUCGUGUUCAAGGAGAAGCUAUUAUAUUUUGUUAAGAAAGUGGGGAGAAAAAAACCAAGAGGCCACCGUGCCUUUGUAAAGAAACAAAAUAAAGUUUGUACUUUGUUUUUUA
Sequence (SHORT NAMES ENCODING)	AGACAUCUGAUCAGCUGCAAACACACACACACACACACACACACACACACACACACACACACACACACAUACACACGCCCGGGGAGGCAGGCCGGAGAGACCUCCCUCCCGCCCCUCCCGCCCGCCUCCCUCCCCUCGCCGCCGCCGCCGCCGCCAGCAUCUGGGACCGGCCGAUUCUGCACCUCCGUCCGGCGCUGCCCUUUGAUUCGGAUUUCCAUCUUGCAUUCUCCGGCUGAUCGCGGGACCUGGCUCGUGCAGAGGAGGGGGGCCGAUCGCUAUGGAGUAUUUCAUGGUGCCCACUCAGAAGGUGCCCUCUUUGCAACAUUUCAGGAAAACAGAGAAAGAAGUGAUAGGAGGGCUCUGUAGCCUUGCCAACAUUCCACUAACCCCCGAGACUCAGCGGGACCAGGAGCGGCGGAUUCGGCGGGAGAUCGCCAACAGCAACGAGCGGAGACGCAUGCAGAGCAUCAACGCGGGAUUCCAGUCCCUCAAGACCCUCAUCCCCCACACAGACGGAGAGAAGCUCAGCAAGGCAGCCAUUCUCCAGCAGACAGCCGAGUACAUCUUCUCCCUGGAGCAGGAGAAGACCAGGCUCUUGCAGCAGAACACACAGCUCAAGCGCUUCAUCCAGGAGCUGAGCGGCUCGUCCCCCAAGCGACGGCGGGCAGAGGACAAGGACGAAGGCAUAGGCUCCCCGGACAUCUGGGAGGACGAGAAGGCGGAGGACCUGCGGCGGGAGAUGAUUGAGCUGCGGCAGCAGCUGGACAAGGAGCGCUCGGUGCGCAUGAUGCUGGAGGAGCAGGUGCGCUCGCUGGAGGCCCACAUGUACCCGGAAAAGCUCAAGGUGAUUGCGCAGCAGGUGCAGCUGCAGCAGCAGCAGGAACAGGUGAGGCUGCUGCACCAGGAGAAGCUGGAGCGGGAm6ACAGCAGCAGCUGCGGACCCAGCUUCUGCCCCCUCCGGCCCCCACCCACCACCCCACGGUGAUCGUGCCAGCACCGCCUCCUCCUCCCUCCCACCACAUCAAUGUCGUCACCAUGGGCCCCUCCUCGGUCAUCAACUCUGUUUCCACAYCCCGGCAAAAUCUGGACACCAUCGUGCAGGCAAUCCAGCACAUCGAGGGCACCCAGGAAAAGCAGGAGCUGGAGGAGGAGCAGCGGCGAGCUGUCAUCGUGAAGCCUGUCCGCAGCUGCCCGGAGGCCCCCACCUCUGACACCGCCUCCGACUCCGAGGCCUCAGACAGUGACGCCAUGGACCAGAGCCGGGAGGAGCCGUCGGGGGACGGGGAGCUUCCCUGACUACCCCCCCAGCCCYCCUCUCCCUUCUGGGGGCUGGAGGGAGCCGGGGCAGCCACAGGGAGAGACAUGGGCGAAUGAGUGAGAAAUUUUUACAAAAUUACGAUGUCAUUUGGGUCUCUUUUAUGACCUCUUUUUCAAUACUGUAAAUCGACCUUUGAACGAAGCCACUCAACCCGAGGUCCCGGGGCUGGGGUGUCGCAGAGCGUGUGGGAGCAUCGGCACCCCAGGGCGGGGCCUCGGCCCCGGGGGCUGGAGGAAGCUGACACGGAGAUGCCUGGCCUCUCUCUGCCAAAAAGCAUUUUUUCCUYUAAAUAUGUUUUUUAAGAACAGGGAAAAUUAAm6ACAAAACCCCAGGUUAUUUCUUCCCUGCCCAGAGCCAGCCUGGGAUUGUCAGCCUUCAAUCCCCUUUCCUUCCUCUUUUUGGGUUUUCUUCUUUCUCCUYUAAGCACUUACAUGGUUGGGGGUAAGm6ACUAGGCUGGGGCAUUCUGGGGGCCCGGAGGUCUCCGUUGCUUCUUGGUUGGGGUUUGCUGCUGCUGUGCCCCCCUCCCCCUUCCCCAUCUCGGCACUAGAAUUCGCCACUCUCCCACCCCCCAGCCCCCACCUCUGCCUCCAGGUCUCAUCUUCCACCCCAAAAAUGUCUGUCUCUCUCUUUUUGUUUUGUUUGUUGUUGGUUUUUUAUUUCUUUUUGGUUUGCUUUCUGUUUUUGUUUUGUUUUUCUUUUUUUUCUUUCUUUUUUUUUUUUUUUUACAAUUUUGAGGUCUUCGUGUUCAAGGAGAAGCUAUUAUAUUUUGUUAAGAAAGUGGGGAGAAAAAAACCAAGAGGCCACCGUGCCUUUGUAAAGAAACAAAAUAAAGUUUGUACUUUGUUUUUUA
Sequence (MODOMICS CODE ENCODING)	AGACAUCUGAUCAGCUGCAAACACACACACACACACACACACACACACACACACACACACACACACACAUACACACGCCCGGGGAGGCAGGCCGGAGAGACCUCCCUCCCGCCCCUCCCGCCCGCCUCCCUCCCCUCGCCGCCGCCGCCGCCGCCAGCAUCUGGGACCGGCCGAUUCUGCACCUCCGUCCGGCGCUGCCCUUUGAUUCGGAUUUCCAUCUUGCAUUCUCCGGCUGAUCGCGGGACCUGGCUCGUGCAGAGGAGGGGGGCCGAUCGCUAUGGAGUAUUUCAUGGUGCCCACUCAGAAGGUGCCCUCUUUGCAACAUUUCAGGAAAACAGAGAAAGAAGUGAUAGGAGGGCUCUGUAGCCUUGCCAACAUUCCACUAACCCCCGAGACUCAGCGGGACCAGGAGCGGCGGAUUCGGCGGGAGAUCGCCAACAGCAACGAGCGGAGACGCAUGCAGAGCAUCAACGCGGGAUUCCAGUCCCUCAAGACCCUCAUCCCCCACACAGACGGAGAGAAGCUCAGCAAGGCAGCCAUUCUCCAGCAGACAGCCGAGUACAUCUUCUCCCUGGAGCAGGAGAAGACCAGGCUCUUGCAGCAGAACACACAGCUCAAGCGCUUCAUCCAGGAGCUGAGCGGCUCGUCCCCCAAGCGACGGCGGGCAGAGGACAAGGACGAAGGCAUAGGCUCCCCGGACAUCUGGGAGGACGAGAAGGCGGAGGACCUGCGGCGGGAGAUGAUUGAGCUGCGGCAGCAGCUGGACAAGGAGCGCUCGGUGCGCAUGAUGCUGGAGGAGCAGGUGCGCUCGCUGGAGGCCCACAUGUACCCGGAAAAGCUCAAGGUGAUUGCGCAGCAGGUGCAGCUGCAGCAGCAGCAGGAACAGGUGAGGCUGCUGCACCAGGAGAAGCUGGAGCGGGA2000000006ACAGCAGCAGCUGCGGACCCAGCUUCUGCCCCCUCCGGCCCCCACCCACCACCCCACGGUGAUCGUGCCAGCACCGCCUCCUCCUCCCUCCCACCACAUCAAUGUCGUCACCAUGGGCCCCUCCUCGGUCAUCAACUCUGUUUCCACA2000000009UCCCGGCAAAAUCUGGACACCAUCGUGCAGGCAAUCCAGCACAUCGAGGGCACCCAGGAAAAGCAGGAGCUGGAGGAGGAGCAGCGGCGAGCUGUCAUCGUGAAGCCUGUCCGCAGCUGCCCGGAGGCCCCCACCUCUGACACCGCCUCCGACUCCGAGGCCUCAGACAGUGACGCCAUGGACCAGAGCCGGGAGGAGCCGUCGGGGGACGGGGAGCUUCCCUGACUACCCCCCCAGCCC2000000009UCCUCUCCCUUCUGGGGGCUGGAGGGAGCCGGGGCAGCCACAGGGAGAGACAUGGGCGAAUGAGUGAGAAAUUUUUACAAAAUUACGAUGUCAUUUGGGUCUCUUUUAUGACCUCUUUUUCAAUACUGUAAAUCGACCUUUGAACGAAGCCACUCAACCCGAGGUCCCGGGGCUGGGGUGUCGCAGAGCGUGUGGGAGCAUCGGCACCCCAGGGCGGGGCCUCGGCCCCGGGGGCUGGAGGAAGCUGACACGGAGAUGCCUGGCCUCUCUCUGCCAAAAAGCAUUUUUUCCU2000000009UUAAAUAUGUUUUUUAAGAACAGGGAAAAUUAA2000000006ACAAAACCCCAGGUUAUUUCUUCCCUGCCCAGAGCCAGCCUGGGAUUGUCAGCCUUCAAUCCCCUUUCCUUCCUCUUUUUGGGUUUUCUUCUUUCUCCU2000000009UUAAGCACUUACAUGGUUGGGGGUAAG2000000006ACUAGGCUGGGGCAUUCUGGGGGCCCGGAGGUCUCCGUUGCUUCUUGGUUGGGGUUUGCUGCUGCUGUGCCCCCCUCCCCCUUCCCCAUCUCGGCACUAGAAUUCGCCACUCUCCCACCCCCCAGCCCCCACCUCUGCCUCCAGGUCUCAUCUUCCACCCCAAAAAUGUCUGUCUCUCUCUUUUUGUUUUGUUUGUUGUUGGUUUUUUAUUUCUUUUUGGUUUGCUUUCUGUUUUUGUUUUGUUUUUCUUUUUUUUCUUUCUUUUUUUUUUUUUUUUACAAUUUUGAGGUCUUCGUGUUCAAGGAGAAGCUAUUAUAUUUUGUUAAGAAAGUGGGGAGAAAAAAACCAAGAGGCCACCGUGCCUUUGUAAAGAAACAAAAUAAAGUUUGUACUUUGUUUUUUA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	922	1070	1310	1602	1635	1734	1761
Modification Positions	m6A	Y	Y	Y	m6A	Y	m6A
Genomic Coordinates	16:4260476:-	16:4260119:-	16:4258039:-	16:4257747:-	16:4257714:-	16:4257615:-	16:4257588:-
Level of Experimental Evidence	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	ArijeGVTwYBw BtsJQJ3DteUq dknfVe6BK8aP JkWoGWVwjNda Yfn77uLS5tv8