General Data

RNA Type	unknown
Original Source	Sci-ModoM
Transcript ID:	ENST00000570116
Gene ID:	ENSG00000141002
Gene Name:	TCF25
Sequence (UNICHARACTER ENCODING)	AGAGAGCGCUGUACAGCAUGGAAUGUGCGUUCCACCCCCUGUUCAGUCUCACCAGUGGGGCCUGCCGGCUGGAUUACCGCAGЖCCCGAGAACAGGAGCUUCUACCUGGCCCUCUACAAGCAGAUGAGCUUCCUGGAGAAGCGAGGCUGCCCGCGCACGGCGCUGGAGUACUGCAAGCUCAPCCUGAGUCUCGAGCCGGAUGAGGACCCCCUCUGCAUGCUGCUGCUCAUCGACCACCUGGCCUUGCGGGCCCGGAACUACGAGUACCUGAUCCGCCUCUUCCAGGAGUGGGAGGCUCAUCGGAACCUGUCCCAGCUCCCUAAUUUUGCCUUCUCUGUUCCACUGGCGUAUUUCCUGCUGAGCCAGCAGACAGACCUCCCUGAGUGUGAGCAGAGCUCUGCCAGGCAGAAGGCCUCUCUCCUGAUACAGCAGGCGCUCACCAUGUUCCCUGGAGUCCUCCUGCCCCUGCUCGAGUCUUGCAGUGUGCGGCCCGACGCCAGCGUUUCCAGUCACCGCUUCUUUGGACCCAAUGCUGAAAUAAGGUAAAGAGUGGCUGGUGGUGCCCAUCUGUGGGUGCCUGUGGGUUCGGAGCCUGGGAGCCAUUUUCACUCAUCCUGAGAGGCCCUGAGGGACCUGCUUCCAGCAGCAGGAGGGGCUGUGGUGGCGGCCUCGGGGЖCUGUCAUUUGACAUGGGACGGCUCUGGAGCCCUCAUCUGUGUGGAAAAGUCCAGGUGGGACAGCUGAGCAGCCUCCAGCUUAAAAACGAGGCUCAUAUAAAGAGGGUGCCAGGCGUGGCGGCACAUGCCUGUAAUCUCAGCUUUUUGGGAGGCCGGCUUGUGCCUGGGAGGUCAAAGGUACAGUGAGCUGUGUUUGUGCUGCUGCACUCCAGCCUGGGUGAUGGUGAGACCCCGUCUCAAAAAACAAAAUAAACAAAGAGGGAGCAAACACAGGAGAAAGUGCACGCCUUGGGGUCAUCCCCUGGCCCUCCAGGGCUCGCCCUGUGUGCACGCAGAUGGЖCCCGCCCUGGGUGCAUUUUCACAUUUCUGUGACGUCAGUCCUGCUUCCUAAAGAACAUAACCUGCCCAACAGGCUCACGGCACAUACCUGUGUGCCCCAGCCCCACGCCCUCAGGCCAGCAGCCCAGGGGCCUCCUUUCACUCCAGGCCACAGGGCACUCCCUGGACCCCCCGUCUGCCCAUCCAUGGGGCUCUGCCAGCCUCGAGGCAGGCUGUGGUCUGAAGAGGGGUUCUGCU?AGAGCCCUUGCUCUCCCCCAGCCAGCCCCCUGCCCUGAGCCAGCUGGUGAЖCCUGUACCUUGGGAGGUCACACUUUCUCUGGAAAGAGCCCGCCACCAUGAGCUGGCUGGAGGAGAACGUCCACGAGGUUCUGCAAGCAGUGGACGCCGGGGACCCAGCCGUGGAAGCCUGUGAGAЖCCGGCGGAAGGUGCUCUACCAGCGUGCACCCAGGAAUAUCCACCGCCAUGUGAUCCUCUCUGAGAUCAAGGAAGCCGUCGCUGCCCUGCCCCCGGACGUGACCACGCAGUCUGUGAUGGGGUUUGAUCCUCUGCCUCCUUCGGACACAAUCUACUCCUACGUCAGGCCAGAGAGGCUAAGUCCUAUCAGCCAUGGAAЖCACCAUUGCUCUCUUCUUCCGGUCACUGUUGCCAAACUAUACCAUGGAGGGGGAGAGGCCCGAGGAAGGAGUGGCUGGGGGUCUGAЖCCGCAACCAGGGCCUGAACЖGGCUGAUGCUGGCUGUGCGCGACAUGAUGGCCAACUUCCACCUCAACGACCUGGAGGCGCCGCACGAGGACGACGCUGAGGGGGAGGGGGAGUGGGЖCUGAGCGUCCGCAGAGGUGACCGAAAAGCCGUAUGAUGAUGUUCCCGAUUUCUCUGUUGGUCGGAGUCGGCCAGUUGCCUGAAGUAGGGAAGCUGAGUGUGUCGCUCCCUGGUCCA
Sequence (SHORT NAMES ENCODING)	AGAGAGCGCUGUACAGCAUGGAAUGUGCGUUCCACCCCCUGUUCAGUCUCACCAGUGGGGCCUGCCGGCUGGAUUACCGCAGm6ACCCGAGAACAGGAGCUUCUACCUGGCCCUCUACAAGCAGAUGAGCUUCCUGGAGAAGCGAGGCUGCCCGCGCACGGCGCUGGAGUACUGCAAGCUCAYCCUGAGUCUCGAGCCGGAUGAGGACCCCCUCUGCAUGCUGCUGCUCAUCGACCACCUGGCCUUGCGGGCCCGGAACUACGAGUACCUGAUCCGCCUCUUCCAGGAGUGGGAGGCUCAUCGGAACCUGUCCCAGCUCCCUAAUUUUGCCUUCUCUGUUCCACUGGCGUAUUUCCUGCUGAGCCAGCAGACAGACCUCCCUGAGUGUGAGCAGAGCUCUGCCAGGCAGAAGGCCUCUCUCCUGAUACAGCAGGCGCUCACCAUGUUCCCUGGAGUCCUCCUGCCCCUGCUCGAGUCUUGCAGUGUGCGGCCCGACGCCAGCGUUUCCAGUCACCGCUUCUUUGGACCCAAUGCUGAAAUAAGGUAAAGAGUGGCUGGUGGUGCCCAUCUGUGGGUGCCUGUGGGUUCGGAGCCUGGGAGCCAUUUUCACUCAUCCUGAGAGGCCCUGAGGGACCUGCUUCCAGCAGCAGGAGGGGCUGUGGUGGCGGCCUCGGGGm6ACUGUCAUUUGACAUGGGACGGCUCUGGAGCCCUCAUCUGUGUGGAAAAGUCCAGGUGGGACAGCUGAGCAGCCUCCAGCUUAAAAACGAGGCUCAUAUAAAGAGGGUGCCAGGCGUGGCGGCACAUGCCUGUAAUCUCAGCUUUUUGGGAGGCCGGCUUGUGCCUGGGAGGUCAAAGGUACAGUGAGCUGUGUUUGUGCUGCUGCACUCCAGCCUGGGUGAUGGUGAGACCCCGUCUCAAAAAACAAAAUAAACAAAGAGGGAGCAAACACAGGAGAAAGUGCACGCCUUGGGGUCAUCCCCUGGCCCUCCAGGGCUCGCCCUGUGUGCACGCAGAUGGm6ACCCGCCCUGGGUGCAUUUUCACAUUUCUGUGACGUCAGUCCUGCUUCCUAAAGAACAUAACCUGCCCAACAGGCUCACGGCACAUACCUGUGUGCCCCAGCCCCACGCCCUCAGGCCAGCAGCCCAGGGGCCUCCUUUCACUCCAGGCCACAGGGCACUCCCUGGACCCCCCGUCUGCCCAUCCAUGGGGCUCUGCCAGCCUCGAGGCAGGCUGUGGUCUGAAGAGGGGUUCUGCUm5CAGAGCCCUUGCUCUCCCCCAGCCAGCCCCCUGCCCUGAGCCAGCUGGUGAm6ACCUGUACCUUGGGAGGUCACACUUUCUCUGGAAAGAGCCCGCCACCAUGAGCUGGCUGGAGGAGAACGUCCACGAGGUUCUGCAAGCAGUGGACGCCGGGGACCCAGCCGUGGAAGCCUGUGAGAm6ACCGGCGGAAGGUGCUCUACCAGCGUGCACCCAGGAAUAUCCACCGCCAUGUGAUCCUCUCUGAGAUCAAGGAAGCCGUCGCUGCCCUGCCCCCGGACGUGACCACGCAGUCUGUGAUGGGGUUUGAUCCUCUGCCUCCUUCGGACACAAUCUACUCCUACGUCAGGCCAGAGAGGCUAAGUCCUAUCAGCCAUGGAAm6ACACCAUUGCUCUCUUCUUCCGGUCACUGUUGCCAAACUAUACCAUGGAGGGGGAGAGGCCCGAGGAAGGAGUGGCUGGGGGUCUGAm6ACCGCAACCAGGGCCUGAACm6AGGCUGAUGCUGGCUGUGCGCGACAUGAUGGCCAACUUCCACCUCAACGACCUGGAGGCGCCGCACGAGGACGACGCUGAGGGGGAGGGGGAGUGGGm6ACUGAGCGUCCGCAGAGGUGACCGAAAAGCCGUAUGAUGAUGUUCCCGAUUUCUCUGUUGGUCGGAGUCGGCCAGUUGCCUGAAGUAGGGAAGCUGAGUGUGUCGCUCCCUGGUCCA
Sequence (MODOMICS CODE ENCODING)	AGAGAGCGCUGUACAGCAUGGAAUGUGCGUUCCACCCCCUGUUCAGUCUCACCAGUGGGGCCUGCCGGCUGGAUUACCGCAG2000000006ACCCGAGAACAGGAGCUUCUACCUGGCCCUCUACAAGCAGAUGAGCUUCCUGGAGAAGCGAGGCUGCCCGCGCACGGCGCUGGAGUACUGCAAGCUCA2000000009UCCUGAGUCUCGAGCCGGAUGAGGACCCCCUCUGCAUGCUGCUGCUCAUCGACCACCUGGCCUUGCGGGCCCGGAACUACGAGUACCUGAUCCGCCUCUUCCAGGAGUGGGAGGCUCAUCGGAACCUGUCCCAGCUCCCUAAUUUUGCCUUCUCUGUUCCACUGGCGUAUUUCCUGCUGAGCCAGCAGACAGACCUCCCUGAGUGUGAGCAGAGCUCUGCCAGGCAGAAGGCCUCUCUCCUGAUACAGCAGGCGCUCACCAUGUUCCCUGGAGUCCUCCUGCCCCUGCUCGAGUCUUGCAGUGUGCGGCCCGACGCCAGCGUUUCCAGUCACCGCUUCUUUGGACCCAAUGCUGAAAUAAGGUAAAGAGUGGCUGGUGGUGCCCAUCUGUGGGUGCCUGUGGGUUCGGAGCCUGGGAGCCAUUUUCACUCAUCCUGAGAGGCCCUGAGGGACCUGCUUCCAGCAGCAGGAGGGGCUGUGGUGGCGGCCUCGGGG2000000006ACUGUCAUUUGACAUGGGACGGCUCUGGAGCCCUCAUCUGUGUGGAAAAGUCCAGGUGGGACAGCUGAGCAGCCUCCAGCUUAAAAACGAGGCUCAUAUAAAGAGGGUGCCAGGCGUGGCGGCACAUGCCUGUAAUCUCAGCUUUUUGGGAGGCCGGCUUGUGCCUGGGAGGUCAAAGGUACAGUGAGCUGUGUUUGUGCUGCUGCACUCCAGCCUGGGUGAUGGUGAGACCCCGUCUCAAAAAACAAAAUAAACAAAGAGGGAGCAAACACAGGAGAAAGUGCACGCCUUGGGGUCAUCCCCUGGCCCUCCAGGGCUCGCCCUGUGUGCACGCAGAUGG2000000006ACCCGCCCUGGGUGCAUUUUCACAUUUCUGUGACGUCAGUCCUGCUUCCUAAAGAACAUAACCUGCCCAACAGGCUCACGGCACAUACCUGUGUGCCCCAGCCCCACGCCCUCAGGCCAGCAGCCCAGGGGCCUCCUUUCACUCCAGGCCACAGGGCACUCCCUGGACCCCCCGUCUGCCCAUCCAUGGGGCUCUGCCAGCCUCGAGGCAGGCUGUGGUCUGAAGAGGGGUUCUGCU2000000005CAGAGCCCUUGCUCUCCCCCAGCCAGCCCCCUGCCCUGAGCCAGCUGGUGA2000000006ACCUGUACCUUGGGAGGUCACACUUUCUCUGGAAAGAGCCCGCCACCAUGAGCUGGCUGGAGGAGAACGUCCACGAGGUUCUGCAAGCAGUGGACGCCGGGGACCCAGCCGUGGAAGCCUGUGAGA2000000006ACCGGCGGAAGGUGCUCUACCAGCGUGCACCCAGGAAUAUCCACCGCCAUGUGAUCCUCUCUGAGAUCAAGGAAGCCGUCGCUGCCCUGCCCCCGGACGUGACCACGCAGUCUGUGAUGGGGUUUGAUCCUCUGCCUCCUUCGGACACAAUCUACUCCUACGUCAGGCCAGAGAGGCUAAGUCCUAUCAGCCAUGGAA2000000006ACACCAUUGCUCUCUUCUUCCGGUCACUGUUGCCAAACUAUACCAUGGAGGGGGAGAGGCCCGAGGAAGGAGUGGCUGGGGGUCUGA2000000006ACCGCAACCAGGGCCUGAAC2000000006AGGCUGAUGCUGGCUGUGCGCGACAUGAUGGCCAACUUCCACCUCAACGACCUGGAGGCGCCGCACGAGGACGACGCUGAGGGGGAGGGGGAGUGGG2000000006ACUGAGCGUCCGCAGAGGUGACCGAAAAGCCGUAUGAUGAUGUUCCCGAUUUCUCUGUUGGUCGGAGUCGGCCAGUUGCCUGAAGUAGGGAAGCUGAGUGUGUCGCUCCCUGGUCCA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	83	181	675	1015	1252	1303	1429	1627	1714	1734	1831
Modification Positions	m6A	Y	m6A	m6A	m5C	m6A	m6A	m6A	m6A	m6A	m6A
Genomic Coordinates	16:89896072:+	16:89898643:+	16:89904339:+	16:89904679:+	16:89904916:+	16:89904967:+	16:89905093:+	16:89910614:+	16:89911117:+	16:89911137:+	16:89911234:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn	6UuHp6YApVKv Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn	Er3yHVFp6tX8 KyXZuxKVckYS 4Hod8ruppnD2 5tjPWDS39J3i 9De2LACts9mj BnpqjwVeTStU bvmqLAbo2zqf mNhhJTdKpjtR	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP f6YSioLdAWpr kx7BHU7ZycYE Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP f6YSioLdAWpr kx7BHU7ZycYE Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	834aFpha8RvT dA7YoLwHrzgR JASnTTw2HeNE ksEP666umrV9 NKGM8wdLLrnu ZuM5xpZmNuDL	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BtsJQJ3DteUq bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP f6YSioLdAWpr kx7BHU7ZycYE Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8