General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000568230
Gene ID:	ENSG00000103550
Gene Name:	KNOP1
Sequence (UNICHARACTER ENCODING)	CACAGCAGCCCACCCAGUCCAGCAAAUGCACAUGUGUUGCAGGCCUGGAUGAGUGAUGGGAAUGGAGAGGGCUUCCAGGGUCAUCACACACGUGACGCUAGGUGCCAGGCACAGCACACUUCUCAAGUGAGGACGCAUGAAAUGUCAGCAUUUGUCGUUACUGAAGAACCCCAAGAAAGUGGCCGGCCUGAGGUCUCGCUGUUGGAGGGUGUCUUCAGGGCCAAGGCGGGUGGGAGAGCAUGGUGCAUGUUAGUGUGGUCCUUGGCCUCUGUCCUGUAGUUUGGUGUCACCGUAGGAGGAAACAGACACGGACUUAGAGGUGGUGUUGGAAAAAAAAGGCAACAUGGAUGAGGCGCACAUAGЖCCAGGUGAGGCGAAAGGCCUUGCAAGAAGAGAUCGAUCGCGAGUCAGGCAAAACGGAAGCUUCUGAAACCAGGAAGUGGACGGGAACCCAGUUUGGCCAGUGGGAUACUGCUGGUUUUGAGAACGAGGACCAAAAЖCUGAAAUUUCUCAGЖCUUAUGGGUGGCUUCAAAAACCUGUCCCCUUCGUUCAGCCGCCCCGCCAGCACGAUUGCAAGGCCCAACAUGGCCCUCGGCAAGAAGGCGGCUGACAGCCUGCAGCAGAAUCUGCAGCGGGЖCUACGACCGGGCCAUGAGCUGGAAGUACAGCCGGGGAGCCGGCCUCGGCUUCUCCACCGCCCCCAACAAGAUCUUUUACAUUGACAGGAACGCUUCCAAGUCAGUCAAGCUGGAAGAUUAAЖCUCUAGAGUUUUGUCCCCCCAAAЖCUGCCACAAUUGCUUUGAUUAUUCCAUUUAUGCUGGAGAUUACAAAUUUUUUUUGUGAAAAAAUCAGAUCUUGGUGAGGЖCCUCGAGCAGUAAGAUAUAAAUAЖCUCCCAPAAGCUUAGCGUUCCAGUAAUGGAACACUAGGCAUAAAUGGUUUAUUCAGUUGUGCAAAUGAAAGCCAUCUGACAGUUGGCUCACAUUGAACACCUGUGGAGAUUAAGGЖCGAGGЖCAACUAUAUUGAUGGGCUUGGAUGAЖCUGGGGCAGGGCAGCUCAUAUUUCGGGAGCCAGGAGAACGAGUGAGUGCUAAAACCUCCUGUUUUCUGUGUUAAЖCAUUCCGUCCCUGUUUGAGACAUCAGUAUGUACAGUUAЖCUUUUGUUGAGUGUUUAGCAGGUACUAGGGACAUACUAGUGUUUUCCUUAAUGUAUUUAAUCUUCAUAAUUAUGAAAUGGGUGCUAUUAUUAGCCCCAUCUUAUAGAUGAGGCAACUGAGGUUCAGGGAUAAAGUAAUAAAAUUGCCUGGGGUCACCCAGCCA
Sequence (SHORT NAMES ENCODING)	CACAGCAGCCCACCCAGUCCAGCAAAUGCACAUGUGUUGCAGGCCUGGAUGAGUGAUGGGAAUGGAGAGGGCUUCCAGGGUCAUCACACACGUGACGCUAGGUGCCAGGCACAGCACACUUCUCAAGUGAGGACGCAUGAAAUGUCAGCAUUUGUCGUUACUGAAGAACCCCAAGAAAGUGGCCGGCCUGAGGUCUCGCUGUUGGAGGGUGUCUUCAGGGCCAAGGCGGGUGGGAGAGCAUGGUGCAUGUUAGUGUGGUCCUUGGCCUCUGUCCUGUAGUUUGGUGUCACCGUAGGAGGAAACAGACACGGACUUAGAGGUGGUGUUGGAAAAAAAAGGCAACAUGGAUGAGGCGCACAUAGm6ACCAGGUGAGGCGAAAGGCCUUGCAAGAAGAGAUCGAUCGCGAGUCAGGCAAAACGGAAGCUUCUGAAACCAGGAAGUGGACGGGAACCCAGUUUGGCCAGUGGGAUACUGCUGGUUUUGAGAACGAGGACCAAAAm6ACUGAAAUUUCUCAGm6ACUUAUGGGUGGCUUCAAAAACCUGUCCCCUUCGUUCAGCCGCCCCGCCAGCACGAUUGCAAGGCCCAACAUGGCCCUCGGCAAGAAGGCGGCUGACAGCCUGCAGCAGAAUCUGCAGCGGGm6ACUACGACCGGGCCAUGAGCUGGAAGUACAGCCGGGGAGCCGGCCUCGGCUUCUCCACCGCCCCCAACAAGAUCUUUUACAUUGACAGGAACGCUUCCAAGUCAGUCAAGCUGGAAGAUUAAm6ACUCUAGAGUUUUGUCCCCCCAAAm6ACUGCCACAAUUGCUUUGAUUAUUCCAUUUAUGCUGGAGAUUACAAAUUUUUUUUGUGAAAAAAUCAGAUCUUGGUGAGGm6ACCUCGAGCAGUAAGAUAUAAAUAm6ACUCCCAYAAGCUUAGCGUUCCAGUAAUGGAACACUAGGCAUAAAUGGUUUAUUCAGUUGUGCAAAUGAAAGCCAUCUGACAGUUGGCUCACAUUGAACACCUGUGGAGAUUAAGGm6ACGAGGm6ACAACUAUAUUGAUGGGCUUGGAUGAm6ACUGGGGCAGGGCAGCUCAUAUUUCGGGAGCCAGGAGAACGAGUGAGUGCUAAAACCUCCUGUUUUCUGUGUUAAm6ACAUUCCGUCCCUGUUUGAGACAUCAGUAUGUACAGUUAm6ACUUUUGUUGAGUGUUUAGCAGGUACUAGGGACAUACUAGUGUUUUCCUUAAUGUAUUUAAUCUUCAUAAUUAUGAAAUGGGUGCUAUUAUUAGCCCCAUCUUAUAGAUGAGGCAACUGAGGUUCAGGGAUAAAGUAAUAAAAUUGCCUGGGGUCACCCAGCCA
Sequence (MODOMICS CODE ENCODING)	CACAGCAGCCCACCCAGUCCAGCAAAUGCACAUGUGUUGCAGGCCUGGAUGAGUGAUGGGAAUGGAGAGGGCUUCCAGGGUCAUCACACACGUGACGCUAGGUGCCAGGCACAGCACACUUCUCAAGUGAGGACGCAUGAAAUGUCAGCAUUUGUCGUUACUGAAGAACCCCAAGAAAGUGGCCGGCCUGAGGUCUCGCUGUUGGAGGGUGUCUUCAGGGCCAAGGCGGGUGGGAGAGCAUGGUGCAUGUUAGUGUGGUCCUUGGCCUCUGUCCUGUAGUUUGGUGUCACCGUAGGAGGAAACAGACACGGACUUAGAGGUGGUGUUGGAAAAAAAAGGCAACAUGGAUGAGGCGCACAUAG2000000006ACCAGGUGAGGCGAAAGGCCUUGCAAGAAGAGAUCGAUCGCGAGUCAGGCAAAACGGAAGCUUCUGAAACCAGGAAGUGGACGGGAACCCAGUUUGGCCAGUGGGAUACUGCUGGUUUUGAGAACGAGGACCAAAA2000000006ACUGAAAUUUCUCAG2000000006ACUUAUGGGUGGCUUCAAAAACCUGUCCCCUUCGUUCAGCCGCCCCGCCAGCACGAUUGCAAGGCCCAACAUGGCCCUCGGCAAGAAGGCGGCUGACAGCCUGCAGCAGAAUCUGCAGCGGG2000000006ACUACGACCGGGCCAUGAGCUGGAAGUACAGCCGGGGAGCCGGCCUCGGCUUCUCCACCGCCCCCAACAAGAUCUUUUACAUUGACAGGAACGCUUCCAAGUCAGUCAAGCUGGAAGAUUAA2000000006ACUCUAGAGUUUUGUCCCCCCAAA2000000006ACUGCCACAAUUGCUUUGAUUAUUCCAUUUAUGCUGGAGAUUACAAAUUUUUUUUGUGAAAAAAUCAGAUCUUGGUGAGG2000000006ACCUCGAGCAGUAAGAUAUAAAUA2000000006ACUCCCA2000000009UAAGCUUAGCGUUCCAGUAAUGGAACACUAGGCAUAAAUGGUUUAUUCAGUUGUGCAAAUGAAAGCCAUCUGACAGUUGGCUCACAUUGAACACCUGUGGAGAUUAAGG2000000006ACGAGG2000000006ACAACUAUAUUGAUGGGCUUGGAUGA2000000006ACUGGGGCAGGGCAGCUCAUAUUUCGGGAGCCAGGAGAACGAGUGAGUGCUAAAACCUCCUGUUUUCUGUGUUAA2000000006ACAUUCCGUCCCUGUUUGAGACAUCAGUAUGUACAGUUA2000000006ACUUUUGUUGAGUGUUUAGCAGGUACUAGGGACAUACUAGUGUUUUCCUUAAUGUAUUUAAUCUUCAUAAUUAUGAAAUGGGUGCUAUUAUUAGCCCCAUCUUAUAGAUGAGGCAACUGAGGUUCAGGGAUAAAGUAAUAAAAUUGCCUGGGGUCACCCAGCCA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	363	499	514	636	758	782	862	886	893	1002	1008	1034	1109	1148
Modification Positions	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	Y	m6A	m6A	m6A	m6A	m6A
Genomic Coordinates	16:19711376:-	16:19707168:-	16:19707153:-	16:19707031:-	16:19706909:-	16:19706885:-	16:19706805:-	16:19706781:-	16:19706774:-	16:19706665:-	16:19706659:-	16:19706633:-	16:19706558:-	16:19706519:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq bXBqJigD9oV3 f6YSioLdAWpr iezFbUdmY3A6 Yfn77uLS5tv8	6AyXsheySjfx Ap2q43bQLNek msuJfBpJvM5H QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BsCW7emuRX7M KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq Yfn77uLS5tv8	6AyXsheySjfx aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh msuJfBpJvM5H NjZ8bGGJsNSR QmcpiJ88DBDn QpiKdbVikVz2 V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U D6ncpa2PPWj3 93arJtwJmuS9 BkoLW2CBToyL nfCHyrYzE6fB BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	3TeAZFYFxgvp 6AyXsheySjfx aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh msuJfBpJvM5H nGifePrmgHfe Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U 8cMbzB4aD5Se BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	6AyXsheySjfx msuJfBpJvM5H VyCX26p5UBRL KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 UKen6WEino9G BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	Ap2q43bQLNek gBgcfFQ5WN9C msuJfBpJvM5H NjZ8bGGJsNSR QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 PF5iqBNSbHaa UKen6WEino9G BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H nGifePrmgHfe V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U 93arJtwJmuS9 nfCHyrYzE6fB BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H nGifePrmgHfe QmcpiJ88DBDn V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 UKen6WEino9G	6AyXsheySjfx 6UuHp6YApVKv Ap2q43bQLNek jNkxUQNx8GRd msuJfBpJvM5H nGifePrmgHfe QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U Lny8GcCeVGc9 BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe Q36pf44ZRvxu QpiKdbVikVz2 V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 PF5iqBNSbHaa UKen6WEino9G BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8