General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000644210
Gene ID:	ENSG00000197912
Gene Name:	SPG7
Sequence (UNICHARACTER ENCODING)	CAGGCCAACAUGGCCGUGCUGCUGCUGCUGCUCCGUGCCCUCCGCCGGGGUCCAGGCCCGGGUCCUCGGCCGCUGUGGGGCCCAGGCCCGGCCUGGAGUCCAGGGUUCCCCGCCAGGCCCGGGAGGGGGCGGCCGUACAUGGCCAGCAGGCCUCCGGGGGACCUCGCCGAGGCUGGAGGCCGAGCUCUGCAGAGCUUACAAUUGAGACUGCUAACCCCUACCUUUGAAGGGAUCAACGGAUUGUUGUUGAAACAACAUUUAGUUCAGAAUCCAGUCAGACUCUGGCAACUUUUAGGUGGUACUUUCUAUUUUAACACCUCAAGGUUGAAGCAGAAGAAUAAGGAGAAGGAUAAGUCGAAGGGGAAGGCGCCUGAAGAGGACGAAGAGGAGAGGAGACGCCGUGAGCGGGACGACCAGAUGUACCGAGAGCGGCUGCGCACCUUGCUGGUCAUCGCGGUUGUCAUGAGCCUCCUGAAUGCUCUCAGCACCAGCGGAGGCAGCAUUUCCUGGAACGACUUUGUCCACGAGAUGCUGGCCAAGGGCGAGGUGCAGCGCGUCCAGGUGGUGCCUGAGAGCGACGUGGUGGAAGUCUACCUGCACCCUGGAGCCGUGGUGUUUGGGCGGCCUCGGCUAGCCUUGAUGUACCGAAUGCAGGUUGCAAAUAUUGACAAGUUUGAAGAGAAGCUUCGAGCAGCUGAAGAUGAGCUGAAUAUCGAGGCCAAGGACAGGAUCCCAGUUUCCUACAAGCGAACAGGAUUCUUUGGAAAUGCCCUGUACUCUGUGGGGAUGACGGCAGUGGGCCUGGCCAUCCUGUGGUAUGUUUUCCGUCUGGCCGGGAUGACUGGAAGGGAAGGUGGAUUCAGUGCUUUUAAUCAGCUUAAAAUGGCUCGUUUCACCAUUGUGGAUGGGAAGAUGGGGAAAGGAGUCAGCUUCAAAGACGUGGCAGGAAUGCACGAAGCCAAACUGGAAGUCCGCGAGUUUGUGGAUUAUCUGAAGAGCCCAGAACGCUUCCUCCAGCUUGGCGCCAAGGUCCCAAAGGGCGCACUGCUGCUCGGCCCCCCCGGCUGUGGGAAGACGCUGCUGGCCAAGGCGGUGGCCACGGAGGCUCAGGUGCCCUUCCUGGCGAUGGCCGGCCCAGAGUUCGUGGAGGUCAUUGGAGGCCUCGGCGCUGCCCGUGUGCGGAGCCUCUUUAAGGAAGCCCGAGCCCGGGCCCCCUGCAUCGUCUACAUCGAUGAGAUCGACGCGGUGGGCAAGAAGCGCUCCACCACCAUGUCCGGCUUCUCCAACACGGAGGAGGAGCAGACGCUCAACCAGCUUCUGGUAGAAAUGGAUGGAAUGGGUACCACAGACCAUGUCAUCGUCCUGGCGUCCACGAACCGAGCUGACAUUUUGGACGGUGCUCUGAUGAGGCCAGGCCGACUGGACCGGCACGUCUUCAUUGAUCUCCCCACGCUGCAGAGAAAGGGUGUUGCGCUGUCACCCAGGCUGGAGUGCAGUGCUGCGAUCACCACUCACUGCGGCCUCAACCUUCAGGGCUCAAGCUGAGGAGCUAGGACUACUAUGGGCGAGAGGCGGGAGAUUUUUGAGCAGCACCUGAAGAGCCUGAAGCUGACCCAGUCCAGCACCUUUUACUCCCAGCGUCUGGCAGAGCUGACACCAGGAUUCAGUGGGGCUGACAUCGCCAACAUCUGCAAUGAGGCUGCGCUGCACGCGGCGCGGGAGGGACACACUUCCGUGCACACUCUCAACUUCGAGUACGCCGUGGAGCGCGUCCUCGCAGGGACUGCCAAAAAGAGCAAGAUCCUGUCCAAGGAAGAACAGAAAGUGGUUGCGUUUCAUGAGUCGGGCCACGCCUUGGUGGGCUGGAUGCUGGAGCACACGGAGGCCGUGAUGAAGGUCUCCAUAACCCCUCGGACAAACGCCGCCCUGGGCUUUGCUCAGAUGCUCCCCAGAGЖCCAGCACCUCUUCACCAAGGAGCAGCUGUUUGAGCGGAUGUGCAUGGCCCUGGGAGGACGGGCCUCGGAAGCACUGUCCUUCAACGAGGUCACUUCUGGGGCACAGGA?GACCUGAGGAAGGUCACCCGCAUCGCCUACUCCAUGGUGAAGCAGUUUGGGAUGGCACCUGGCAUCGGGCCCAUCUCCUUCCCUGAGGCGCAGGAGGGCCUCAUGGGCAUCGGGCGGCGCCCCUUCAGCCAAGGCCUGCAGCAGAUGAUGGACCAUGAAGCAAGACUGCUGGUGGCCAAGGCCUACAGACACACCGAGAAGGUGCUGCAGGACAACCUGGACAAGUUGCAGGCGCUGGCAAACGCCCUUCUGGAAAAGGAAGUGAUAAACUAUGAGGACAUUGAGGCUCUCAUUGGCCCGCCGCCCCAUGGGCCGAAGAAAAUGAUCGCACCGCAGAGGUGGAUCGACGCCCAGAGGGAGAAACAGGACUUGGGCGAGGAGGAGACCGAAGAGЖCCCAGCAGCCUCCACUUGGAGGCGAAGAGCCGACUUGGCCCAAGUAGUUGGGAGGUGUUGGCUGCACGUGCGGGUGGUCCGGGAAGUGAGGGCUCACUCAGCCACCCUGAGUUGCUUUUCAGCUGAGGUUUGCACUUCCUCUCGCGGCCCUCAGUAGUCCCUGCACAGUGACUUCUGAGAUCUGUUGAUUGAUGACCCUUUUCAUGAUUUUAAGUUUCUCUGCAGAAЖCUACUGACGGAGUCCUGUGUUUGUGAGUCGUUUCCCCUAUGGGGAAGGUUAUCAGUGCUUCCCGAGUGAGCAUGGAACACUUCGAGUUCCCAGGGUUAUAGЖCAGUCGUUCCCAGUGUGGCUGAGGCCACC
Sequence (SHORT NAMES ENCODING)	CAGGCCAACAUGGCCGUGCUGCUGCUGCUGCUCCGUGCCCUCCGCCGGGGUCCAGGCCCGGGUCCUCGGCCGCUGUGGGGCCCAGGCCCGGCCUGGAGUCCAGGGUUCCCCGCCAGGCCCGGGAGGGGGCGGCCGUACAUGGCCAGCAGGCCUCCGGGGGACCUCGCCGAGGCUGGAGGCCGAGCUCUGCAGAGCUUACAAUUGAGACUGCUAACCCCUACCUUUGAAGGGAUCAACGGAUUGUUGUUGAAACAACAUUUAGUUCAGAAUCCAGUCAGACUCUGGCAACUUUUAGGUGGUACUUUCUAUUUUAACACCUCAAGGUUGAAGCAGAAGAAUAAGGAGAAGGAUAAGUCGAAGGGGAAGGCGCCUGAAGAGGACGAAGAGGAGAGGAGACGCCGUGAGCGGGACGACCAGAUGUACCGAGAGCGGCUGCGCACCUUGCUGGUCAUCGCGGUUGUCAUGAGCCUCCUGAAUGCUCUCAGCACCAGCGGAGGCAGCAUUUCCUGGAACGACUUUGUCCACGAGAUGCUGGCCAAGGGCGAGGUGCAGCGCGUCCAGGUGGUGCCUGAGAGCGACGUGGUGGAAGUCUACCUGCACCCUGGAGCCGUGGUGUUUGGGCGGCCUCGGCUAGCCUUGAUGUACCGAAUGCAGGUUGCAAAUAUUGACAAGUUUGAAGAGAAGCUUCGAGCAGCUGAAGAUGAGCUGAAUAUCGAGGCCAAGGACAGGAUCCCAGUUUCCUACAAGCGAACAGGAUUCUUUGGAAAUGCCCUGUACUCUGUGGGGAUGACGGCAGUGGGCCUGGCCAUCCUGUGGUAUGUUUUCCGUCUGGCCGGGAUGACUGGAAGGGAAGGUGGAUUCAGUGCUUUUAAUCAGCUUAAAAUGGCUCGUUUCACCAUUGUGGAUGGGAAGAUGGGGAAAGGAGUCAGCUUCAAAGACGUGGCAGGAAUGCACGAAGCCAAACUGGAAGUCCGCGAGUUUGUGGAUUAUCUGAAGAGCCCAGAACGCUUCCUCCAGCUUGGCGCCAAGGUCCCAAAGGGCGCACUGCUGCUCGGCCCCCCCGGCUGUGGGAAGACGCUGCUGGCCAAGGCGGUGGCCACGGAGGCUCAGGUGCCCUUCCUGGCGAUGGCCGGCCCAGAGUUCGUGGAGGUCAUUGGAGGCCUCGGCGCUGCCCGUGUGCGGAGCCUCUUUAAGGAAGCCCGAGCCCGGGCCCCCUGCAUCGUCUACAUCGAUGAGAUCGACGCGGUGGGCAAGAAGCGCUCCACCACCAUGUCCGGCUUCUCCAACACGGAGGAGGAGCAGACGCUCAACCAGCUUCUGGUAGAAAUGGAUGGAAUGGGUACCACAGACCAUGUCAUCGUCCUGGCGUCCACGAACCGAGCUGACAUUUUGGACGGUGCUCUGAUGAGGCCAGGCCGACUGGACCGGCACGUCUUCAUUGAUCUCCCCACGCUGCAGAGAAAGGGUGUUGCGCUGUCACCCAGGCUGGAGUGCAGUGCUGCGAUCACCACUCACUGCGGCCUCAACCUUCAGGGCUCAAGCUGAGGAGCUAGGACUACUAUGGGCGAGAGGCGGGAGAUUUUUGAGCAGCACCUGAAGAGCCUGAAGCUGACCCAGUCCAGCACCUUUUACUCCCAGCGUCUGGCAGAGCUGACACCAGGAUUCAGUGGGGCUGACAUCGCCAACAUCUGCAAUGAGGCUGCGCUGCACGCGGCGCGGGAGGGACACACUUCCGUGCACACUCUCAACUUCGAGUACGCCGUGGAGCGCGUCCUCGCAGGGACUGCCAAAAAGAGCAAGAUCCUGUCCAAGGAAGAACAGAAAGUGGUUGCGUUUCAUGAGUCGGGCCACGCCUUGGUGGGCUGGAUGCUGGAGCACACGGAGGCCGUGAUGAAGGUCUCCAUAACCCCUCGGACAAACGCCGCCCUGGGCUUUGCUCAGAUGCUCCCCAGAGm6ACCAGCACCUCUUCACCAAGGAGCAGCUGUUUGAGCGGAUGUGCAUGGCCCUGGGAGGACGGGCCUCGGAAGCACUGUCCUUCAACGAGGUCACUUCUGGGGCACAGGAm5CGACCUGAGGAAGGUCACCCGCAUCGCCUACUCCAUGGUGAAGCAGUUUGGGAUGGCACCUGGCAUCGGGCCCAUCUCCUUCCCUGAGGCGCAGGAGGGCCUCAUGGGCAUCGGGCGGCGCCCCUUCAGCCAAGGCCUGCAGCAGAUGAUGGACCAUGAAGCAAGACUGCUGGUGGCCAAGGCCUACAGACACACCGAGAAGGUGCUGCAGGACAACCUGGACAAGUUGCAGGCGCUGGCAAACGCCCUUCUGGAAAAGGAAGUGAUAAACUAUGAGGACAUUGAGGCUCUCAUUGGCCCGCCGCCCCAUGGGCCGAAGAAAAUGAUCGCACCGCAGAGGUGGAUCGACGCCCAGAGGGAGAAACAGGACUUGGGCGAGGAGGAGACCGAAGAGm6ACCCAGCAGCCUCCACUUGGAGGCGAAGAGCCGACUUGGCCCAAGUAGUUGGGAGGUGUUGGCUGCACGUGCGGGUGGUCCGGGAAGUGAGGGCUCACUCAGCCACCCUGAGUUGCUUUUCAGCUGAGGUUUGCACUUCCUCUCGCGGCCCUCAGUAGUCCCUGCACAGUGACUUCUGAGAUCUGUUGAUUGAUGACCCUUUUCAUGAUUUUAAGUUUCUCUGCAGAAm6ACUACUGACGGAGUCCUGUGUUUGUGAGUCGUUUCCCCUAUGGGGAAGGUUAUCAGUGCUUCCCGAGUGAGCAUGGAACACUUCGAGUUCCCAGGGUUAUAGm6ACAGUCGUUCCCAGUGUGGCUGAGGCCACC
Sequence (MODOMICS CODE ENCODING)	CAGGCCAACAUGGCCGUGCUGCUGCUGCUGCUCCGUGCCCUCCGCCGGGGUCCAGGCCCGGGUCCUCGGCCGCUGUGGGGCCCAGGCCCGGCCUGGAGUCCAGGGUUCCCCGCCAGGCCCGGGAGGGGGCGGCCGUACAUGGCCAGCAGGCCUCCGGGGGACCUCGCCGAGGCUGGAGGCCGAGCUCUGCAGAGCUUACAAUUGAGACUGCUAACCCCUACCUUUGAAGGGAUCAACGGAUUGUUGUUGAAACAACAUUUAGUUCAGAAUCCAGUCAGACUCUGGCAACUUUUAGGUGGUACUUUCUAUUUUAACACCUCAAGGUUGAAGCAGAAGAAUAAGGAGAAGGAUAAGUCGAAGGGGAAGGCGCCUGAAGAGGACGAAGAGGAGAGGAGACGCCGUGAGCGGGACGACCAGAUGUACCGAGAGCGGCUGCGCACCUUGCUGGUCAUCGCGGUUGUCAUGAGCCUCCUGAAUGCUCUCAGCACCAGCGGAGGCAGCAUUUCCUGGAACGACUUUGUCCACGAGAUGCUGGCCAAGGGCGAGGUGCAGCGCGUCCAGGUGGUGCCUGAGAGCGACGUGGUGGAAGUCUACCUGCACCCUGGAGCCGUGGUGUUUGGGCGGCCUCGGCUAGCCUUGAUGUACCGAAUGCAGGUUGCAAAUAUUGACAAGUUUGAAGAGAAGCUUCGAGCAGCUGAAGAUGAGCUGAAUAUCGAGGCCAAGGACAGGAUCCCAGUUUCCUACAAGCGAACAGGAUUCUUUGGAAAUGCCCUGUACUCUGUGGGGAUGACGGCAGUGGGCCUGGCCAUCCUGUGGUAUGUUUUCCGUCUGGCCGGGAUGACUGGAAGGGAAGGUGGAUUCAGUGCUUUUAAUCAGCUUAAAAUGGCUCGUUUCACCAUUGUGGAUGGGAAGAUGGGGAAAGGAGUCAGCUUCAAAGACGUGGCAGGAAUGCACGAAGCCAAACUGGAAGUCCGCGAGUUUGUGGAUUAUCUGAAGAGCCCAGAACGCUUCCUCCAGCUUGGCGCCAAGGUCCCAAAGGGCGCACUGCUGCUCGGCCCCCCCGGCUGUGGGAAGACGCUGCUGGCCAAGGCGGUGGCCACGGAGGCUCAGGUGCCCUUCCUGGCGAUGGCCGGCCCAGAGUUCGUGGAGGUCAUUGGAGGCCUCGGCGCUGCCCGUGUGCGGAGCCUCUUUAAGGAAGCCCGAGCCCGGGCCCCCUGCAUCGUCUACAUCGAUGAGAUCGACGCGGUGGGCAAGAAGCGCUCCACCACCAUGUCCGGCUUCUCCAACACGGAGGAGGAGCAGACGCUCAACCAGCUUCUGGUAGAAAUGGAUGGAAUGGGUACCACAGACCAUGUCAUCGUCCUGGCGUCCACGAACCGAGCUGACAUUUUGGACGGUGCUCUGAUGAGGCCAGGCCGACUGGACCGGCACGUCUUCAUUGAUCUCCCCACGCUGCAGAGAAAGGGUGUUGCGCUGUCACCCAGGCUGGAGUGCAGUGCUGCGAUCACCACUCACUGCGGCCUCAACCUUCAGGGCUCAAGCUGAGGAGCUAGGACUACUAUGGGCGAGAGGCGGGAGAUUUUUGAGCAGCACCUGAAGAGCCUGAAGCUGACCCAGUCCAGCACCUUUUACUCCCAGCGUCUGGCAGAGCUGACACCAGGAUUCAGUGGGGCUGACAUCGCCAACAUCUGCAAUGAGGCUGCGCUGCACGCGGCGCGGGAGGGACACACUUCCGUGCACACUCUCAACUUCGAGUACGCCGUGGAGCGCGUCCUCGCAGGGACUGCCAAAAAGAGCAAGAUCCUGUCCAAGGAAGAACAGAAAGUGGUUGCGUUUCAUGAGUCGGGCCACGCCUUGGUGGGCUGGAUGCUGGAGCACACGGAGGCCGUGAUGAAGGUCUCCAUAACCCCUCGGACAAACGCCGCCCUGGGCUUUGCUCAGAUGCUCCCCAGAG2000000006ACCAGCACCUCUUCACCAAGGAGCAGCUGUUUGAGCGGAUGUGCAUGGCCCUGGGAGGACGGGCCUCGGAAGCACUGUCCUUCAACGAGGUCACUUCUGGGGCACAGGA2000000005CGACCUGAGGAAGGUCACCCGCAUCGCCUACUCCAUGGUGAAGCAGUUUGGGAUGGCACCUGGCAUCGGGCCCAUCUCCUUCCCUGAGGCGCAGGAGGGCCUCAUGGGCAUCGGGCGGCGCCCCUUCAGCCAAGGCCUGCAGCAGAUGAUGGACCAUGAAGCAAGACUGCUGGUGGCCAAGGCCUACAGACACACCGAGAAGGUGCUGCAGGACAACCUGGACAAGUUGCAGGCGCUGGCAAACGCCCUUCUGGAAAAGGAAGUGAUAAACUAUGAGGACAUUGAGGCUCUCAUUGGCCCGCCGCCCCAUGGGCCGAAGAAAAUGAUCGCACCGCAGAGGUGGAUCGACGCCCAGAGGGAGAAACAGGACUUGGGCGAGGAGGAGACCGAAGAG2000000006ACCCAGCAGCCUCCACUUGGAGGCGAAGAGCCGACUUGGCCCAAGUAGUUGGGAGGUGUUGGCUGCACGUGCGGGUGGUCCGGGAAGUGAGGGCUCACUCAGCCACCCUGAGUUGCUUUUCAGCUGAGGUUUGCACUUCCUCUCGCGGCCCUCAGUAGUCCCUGCACAGUGACUUCUGAGAUCUGUUGAUUGAUGACCCUUUUCAUGAUUUUAAGUUUCUCUGCAGAA2000000006ACUACUGACGGAGUCCUGUGUUUGUGAGUCGUUUCCCCUAUGGGGAAGGUUAUCAGUGCUUCCCGAGUGAGCAUGGAACACUUCGAGUUCCCAGGGUUAUAG2000000006ACAGUCGUUCCCAGUGUGGCUGAGGCCACC

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	1955	2064	2458	2686	2788
Modification Positions	m6A	m5C	m6A	m6A	m6A
Genomic Coordinates	16:89553037:+	16:89553804:+	16:89557046:+	16:89557274:+	16:89557376:+
Level of Experimental Evidence	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	8cMbzB4aD5Se BtsJQJ3DteUq iezFbUdmY3A6	4RW3xrzJ5VQa JBTYPMm6qNsy 4Hod8ruppnD2 5tjPWDS39J3i 9De2LACts9mj BnpqjwVeTStU bvmqLAbo2zqf mNhhJTdKpjtR	NjZ8bGGJsNSR BtsJQJ3DteUq bXBqJigD9oV3 iezFbUdmY3A6	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP XWZVGdLC6gGJ iezFbUdmY3A6	3TeAZFYFxgvp 4HMi5ykupT9V 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U 8cMbzB4aD5Se 93arJtwJmuS9 KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 UKen6WEino9G BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP XWZVGdLC6gGJ iezFbUdmY3A6 JkWoGWVwjNda