General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000570904
Gene ID:	ENSG00000189067
Gene Name:	LITAF
Sequence (UNICHARACTER ENCODING)	CAGGCUGUCGGGGGCGGACGGGUGGGGCUGGCACCGAGAGGCAGGGGCAGGAUAGGAGAGUGGGGGAGACACCAGGUCCGCGCCAGGCGUCUCGGGGGUAAAAUGUCGGUUCCAGGACCUUACCAGGCGGCCACUGGGCCUUCCUCAGCACCAPCCGCACCUCCAPCCUAUGAAGAGACAGUGGCUGUUAACAGUUAUUACCCCACACCPCCAGCUCCCAUGCCUGGGCCAACUACGGGGCUUGUGACGGGGCCUGAUGGGAAGGGCAUGAAUCCUCCUUCGUAUUAUACCCAGCCAGCGCCCAUCCCCAAUAACAAUCCAAUUACCGUGCAGACGGUCUACGUGCAGCACCCCAUCACCUUUUUGGACCGCCCUAUCCAAAUGUGUUGUCCUUCCUGCAACAAGAUGAUCGUGAGUCAGCUGUCCUAUAACGCCGGUGCUCUGACCUGGCUGUCCUGCGGGAGCCUGUGCCUGCUGGGGUGCAUAGCGGGCUGCUGCUUCAPCCCCUUCUGCGUGGAUGCCCUGCAGGACGUGGACCAUUACUGUCCCAACUGCAGAGCUCUCCUGGGCACCUACAAGCGUUUGUAGGACUCAGCCAGACGUGGAGGGAGCCGGGUGCCGCAGGAAGUCCUUUCCACCUCUCAPCCAGCUUCACGCCUGGUGGAGGUUCUGCCCUGGUGGUCUCACCUCUCCAGGGGGCCCACCUUCAUGUCUUCUUUUGGGGGGAAUACGUCGCAAAACUAACAAAUCUCCAAACCCCAGAAAUUGCUGCUUGGAGUCGUGCAUAGGЖCUUGCAAAGЖCAUUCCCCUUGAGUGUCAGUUCCACGGUUUCCUGCCUCCCUGAGЖCCCUGAGUCCUGCCAUCUAACUGUGAUCAUUGCCCUAUCCGAAUAUCUUCCUGUGAUCUGCCAUCAGUGGCUCUUUUUUCCUGCUUCCAUGGGCCUUUCUGGUGGCAGUCUCAAACUGAGAAGCCACAGUUGCCUUAUUUUUGAGGCUGUUCUGCCCAGAGCUCGGCUGAACCAGCCUPUAGUGCCUACCAUUAUCUUAUCCGUCUCUUCCCGUCCCUGAUGACAAAGAUCUUGCCUUACЖGACUPUACAGGCUUGGCUUUGAGAUUCUGUAA
Sequence (SHORT NAMES ENCODING)	CAGGCUGUCGGGGGCGGACGGGUGGGGCUGGCACCGAGAGGCAGGGGCAGGAUAGGAGAGUGGGGGAGACACCAGGUCCGCGCCAGGCGUCUCGGGGGUAAAAUGUCGGUUCCAGGACCUUACCAGGCGGCCACUGGGCCUUCCUCAGCACCAYCCGCACCUCCAYCCUAUGAAGAGACAGUGGCUGUUAACAGUUAUUACCCCACACCYCCAGCUCCCAUGCCUGGGCCAACUACGGGGCUUGUGACGGGGCCUGAUGGGAAGGGCAUGAAUCCUCCUUCGUAUUAUACCCAGCCAGCGCCCAUCCCCAAUAACAAUCCAAUUACCGUGCAGACGGUCUACGUGCAGCACCCCAUCACCUUUUUGGACCGCCCUAUCCAAAUGUGUUGUCCUUCCUGCAACAAGAUGAUCGUGAGUCAGCUGUCCUAUAACGCCGGUGCUCUGACCUGGCUGUCCUGCGGGAGCCUGUGCCUGCUGGGGUGCAUAGCGGGCUGCUGCUUCAYCCCCUUCUGCGUGGAUGCCCUGCAGGACGUGGACCAUUACUGUCCCAACUGCAGAGCUCUCCUGGGCACCUACAAGCGUUUGUAGGACUCAGCCAGACGUGGAGGGAGCCGGGUGCCGCAGGAAGUCCUUUCCACCUCUCAYCCAGCUUCACGCCUGGUGGAGGUUCUGCCCUGGUGGUCUCACCUCUCCAGGGGGCCCACCUUCAUGUCUUCUUUUGGGGGGAAUACGUCGCAAAACUAACAAAUCUCCAAACCCCAGAAAUUGCUGCUUGGAGUCGUGCAUAGGm6ACUUGCAAAGm6ACAUUCCCCUUGAGUGUCAGUUCCACGGUUUCCUGCCUCCCUGAGm6ACCCUGAGUCCUGCCAUCUAACUGUGAUCAUUGCCCUAUCCGAAUAUCUUCCUGUGAUCUGCCAUCAGUGGCUCUUUUUUCCUGCUUCCAUGGGCCUUUCUGGUGGCAGUCUCAAACUGAGAAGCCACAGUUGCCUUAUUUUUGAGGCUGUUCUGCCCAGAGCUCGGCUGAACCAGCCUYUAGUGCCUACCAUUAUCUUAUCCGUCUCUUCCCGUCCCUGAUGACAAAGAUCUUGCCUUACm6AGACUYUACAGGCUUGGCUUUGAGAUUCUGUAA
Sequence (MODOMICS CODE ENCODING)	CAGGCUGUCGGGGGCGGACGGGUGGGGCUGGCACCGAGAGGCAGGGGCAGGAUAGGAGAGUGGGGGAGACACCAGGUCCGCGCCAGGCGUCUCGGGGGUAAAAUGUCGGUUCCAGGACCUUACCAGGCGGCCACUGGGCCUUCCUCAGCACCA2000000009UCCGCACCUCCA2000000009UCCUAUGAAGAGACAGUGGCUGUUAACAGUUAUUACCCCACACC2000000009UCCAGCUCCCAUGCCUGGGCCAACUACGGGGCUUGUGACGGGGCCUGAUGGGAAGGGCAUGAAUCCUCCUUCGUAUUAUACCCAGCCAGCGCCCAUCCCCAAUAACAAUCCAAUUACCGUGCAGACGGUCUACGUGCAGCACCCCAUCACCUUUUUGGACCGCCCUAUCCAAAUGUGUUGUCCUUCCUGCAACAAGAUGAUCGUGAGUCAGCUGUCCUAUAACGCCGGUGCUCUGACCUGGCUGUCCUGCGGGAGCCUGUGCCUGCUGGGGUGCAUAGCGGGCUGCUGCUUCA2000000009UCCCCUUCUGCGUGGAUGCCCUGCAGGACGUGGACCAUUACUGUCCCAACUGCAGAGCUCUCCUGGGCACCUACAAGCGUUUGUAGGACUCAGCCAGACGUGGAGGGAGCCGGGUGCCGCAGGAAGUCCUUUCCACCUCUCA2000000009UCCAGCUUCACGCCUGGUGGAGGUUCUGCCCUGGUGGUCUCACCUCUCCAGGGGGCCCACCUUCAUGUCUUCUUUUGGGGGGAAUACGUCGCAAAACUAACAAAUCUCCAAACCCCAGAAAUUGCUGCUUGGAGUCGUGCAUAGG2000000006ACUUGCAAAG2000000006ACAUUCCCCUUGAGUGUCAGUUCCACGGUUUCCUGCCUCCCUGAG2000000006ACCCUGAGUCCUGCCAUCUAACUGUGAUCAUUGCCCUAUCCGAAUAUCUUCCUGUGAUCUGCCAUCAGUGGCUCUUUUUUCCUGCUUCCAUGGGCCUUUCUGGUGGCAGUCUCAAACUGAGAAGCCACAGUUGCCUUAUUUUUGAGGCUGUUCUGCCCAGAGCUCGGCUGAACCAGCCU2000000009UUAGUGCCUACCAUUAUCUUAUCCGUCUCUUCCCGUCCCUGAUGACAAAGAUCUUGCCUUAC2000000006AGACU2000000009UUACAGGCUUGGCUUUGAGAUUCUGUAA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	154	166	210	503	645	790	800	845	1024	1086	1091
Modification Positions	Y	Y	Y	Y	Y	m6A	m6A	m6A	Y	m6A	Y
Genomic Coordinates	16:11556679:-	16:11556667:-	16:11556623:-	16:11549722:-	16:11549580:-	16:11549435:-	16:11549425:-	16:11549380:-	16:11549201:-	16:11549139:-	16:11549134:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 f6YSioLdAWpr Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 5FhTyQVy2tKW 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U 8cMbzB4aD5Se 93arJtwJmuS9 ArijeGVTwYBw BkoLW2CBToyL KTLz8piFYdwC nfCHyrYzE6fB WiQcrNTGZHPT BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 5FhTyQVy2tKW 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U ArijeGVTwYBw WiQcrNTGZHPT BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Yfn77uLS5tv8	ArijeGVTwYBw WiQcrNTGZHPT BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Yfn77uLS5tv8	3kRDPWwiRCgi L6w2k2VEv4EY	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Yfn77uLS5tv8