General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000562442
Gene ID:	ENSG00000103429
Gene Name:	BFAR
Sequence (UNICHARACTER ENCODING)	CCGGUAGCGAAGCCUCUCCCUCUUCCUCUGCUCCCGCGGGGUCUGUGCUGAGAAUAAUGGCCCGGUUGGCCCGGGACGAGUGGAAUGAUUAAUGAUGUUUUGCAGCAGUUUUCUACGUCUGAAAUUUUUUAUGUCUCUGGAACCCAGAAUUUGCUAAGAGAUGGAGGAACCUCAGAAAAGCUAUGUGAACACAAUGGЖCCUUGAGAGAGAUGAACCUCUCAAAAGCACCGGCCCUCAGAUUUCUGUUAGUGAAUUUUCUUGCCACUGCUGCUACGACAPCCUGGUUAACCCCACCACCUUGAЖCUGUGGGCACAGCUUCUGCCGUCACUGCCUUGCUPUAUGGUGGGCAUCUUCAAAGAAAACAGAAUGUCCAGAAUGCAGAGAAAAAUGGGAAGGUUUCCCCAAAGUCAGUAUUCUCCUCAGGGAUGCCAUUGAAAAGUUAUUUCCUGAUGCCAUUAGACUGAGAUUUGAAGACAUUCAGCAGAAUAAUGACAUAGUCCAAAGUCUUGCAGCCUUUCAGAAAUAUGGGAAUGAUCAGAUUCCUPUAGCUCCUAACACAGGCCGAGCGAAUCAGCAGAUGGGAGGGGGAUUCUUUUCCGGUGUGCUCACAGCUPUAACUGGAGUGGCAGUGGUCCUGCUCGUCUAUCACUGGAGCAGCAGGGAAUCUGAACACGACCUCCUGGUCCACAAGGCUGUGGCCAAAUGGACGGCGGAAGAAGUUGUCCUCUGGCUGGAGCAGCUGGGCCCUUGGGCAUCUCUPUACAGGGAAAGGUUUUUAUCUGAACGAGUAAAUGGAAGGUGAGGAGCAAAGUCUUCUGACACACCGUGGЖCAUUUUAGAAAACAGCUUUCUUGAGAUAUAAUCCAGGCCAGGCGCGGUGGCUCACACCUGGAUCCCAGCЖCUUUGGGAGGCCGAGGCGGAUCGAUCAUUUGAGGUCAGGAGUUCCAGACCAGCCUGACCAAUAUGAUGAAACCCCAUCUCUACUAAAAAUACAAAAAAAAAAAAUUGGCCAGGCUUGGUAGUGCACACCUUGUAAUCCCAUCUAUUCGGGAGGCUGAGACAGGAGAAUCACUUGAACCCAAGAGGUGGAGGUUACAAUGAGCCAAGAUCAUGCCACUGCACUCCAGCCUAGGCAACAAGGCAAGЖCUCCAUCUCAAAAAGAGAGAGAGAGAGAUGUAAUCUACAUAAAAUUCACACGUUUGAAGUGCACAAUCCAUGGUUUUUAAUGUGUUCACAAAUAGUGUGAUUAUCACCACAGCUGGUUUUAGAЖCAUUUUCAUCACCCUAAAAGAAAGCUUUUACCCUUCAGUCAAUCCUCAUUUCUCCCCAACCCCCAGCCCCUGGCAAЖCACCAUUCUACUUUCUGUCUPUAUGGAUUUGUCUAUUCUGGACGUUUGAUAUAAAUGGAUUCAUACAA
Sequence (SHORT NAMES ENCODING)	CCGGUAGCGAAGCCUCUCCCUCUUCCUCUGCUCCCGCGGGGUCUGUGCUGAGAAUAAUGGCCCGGUUGGCCCGGGACGAGUGGAAUGAUUAAUGAUGUUUUGCAGCAGUUUUCUACGUCUGAAAUUUUUUAUGUCUCUGGAACCCAGAAUUUGCUAAGAGAUGGAGGAACCUCAGAAAAGCUAUGUGAACACAAUGGm6ACCUUGAGAGAGAUGAACCUCUCAAAAGCACCGGCCCUCAGAUUUCUGUUAGUGAAUUUUCUUGCCACUGCUGCUACGACAYCCUGGUUAACCCCACCACCUUGAm6ACUGUGGGCACAGCUUCUGCCGUCACUGCCUUGCUYUAUGGUGGGCAUCUUCAAAGAAAACAGAAUGUCCAGAAUGCAGAGAAAAAUGGGAAGGUUUCCCCAAAGUCAGUAUUCUCCUCAGGGAUGCCAUUGAAAAGUUAUUUCCUGAUGCCAUUAGACUGAGAUUUGAAGACAUUCAGCAGAAUAAUGACAUAGUCCAAAGUCUUGCAGCCUUUCAGAAAUAUGGGAAUGAUCAGAUUCCUYUAGCUCCUAACACAGGCCGAGCGAAUCAGCAGAUGGGAGGGGGAUUCUUUUCCGGUGUGCUCACAGCUYUAACUGGAGUGGCAGUGGUCCUGCUCGUCUAUCACUGGAGCAGCAGGGAAUCUGAACACGACCUCCUGGUCCACAAGGCUGUGGCCAAAUGGACGGCGGAAGAAGUUGUCCUCUGGCUGGAGCAGCUGGGCCCUUGGGCAUCUCUYUACAGGGAAAGGUUUUUAUCUGAACGAGUAAAUGGAAGGUGAGGAGCAAAGUCUUCUGACACACCGUGGm6ACAUUUUAGAAAACAGCUUUCUUGAGAUAUAAUCCAGGCCAGGCGCGGUGGCUCACACCUGGAUCCCAGCm6ACUUUGGGAGGCCGAGGCGGAUCGAUCAUUUGAGGUCAGGAGUUCCAGACCAGCCUGACCAAUAUGAUGAAACCCCAUCUCUACUAAAAAUACAAAAAAAAAAAAUUGGCCAGGCUUGGUAGUGCACACCUUGUAAUCCCAUCUAUUCGGGAGGCUGAGACAGGAGAAUCACUUGAACCCAAGAGGUGGAGGUUACAAUGAGCCAAGAUCAUGCCACUGCACUCCAGCCUAGGCAACAAGGCAAGm6ACUCCAUCUCAAAAAGAGAGAGAGAGAGAUGUAAUCUACAUAAAAUUCACACGUUUGAAGUGCACAAUCCAUGGUUUUUAAUGUGUUCACAAAUAGUGUGAUUAUCACCACAGCUGGUUUUAGAm6ACAUUUUCAUCACCCUAAAAGAAAGCUUUUACCCUUCAGUCAAUCCUCAUUUCUCCCCAACCCCCAGCCCCUGGCAAm6ACACCAUUCUACUUUCUGUCUYUAUGGAUUUGUCUAUUCUGGACGUUUGAUAUAAAUGGAUUCAUACAA
Sequence (MODOMICS CODE ENCODING)	CCGGUAGCGAAGCCUCUCCCUCUUCCUCUGCUCCCGCGGGGUCUGUGCUGAGAAUAAUGGCCCGGUUGGCCCGGGACGAGUGGAAUGAUUAAUGAUGUUUUGCAGCAGUUUUCUACGUCUGAAAUUUUUUAUGUCUCUGGAACCCAGAAUUUGCUAAGAGAUGGAGGAACCUCAGAAAAGCUAUGUGAACACAAUGG2000000006ACCUUGAGAGAGAUGAACCUCUCAAAAGCACCGGCCCUCAGAUUUCUGUUAGUGAAUUUUCUUGCCACUGCUGCUACGACA2000000009UCCUGGUUAACCCCACCACCUUGA2000000006ACUGUGGGCACAGCUUCUGCCGUCACUGCCUUGCU2000000009UUAUGGUGGGCAUCUUCAAAGAAAACAGAAUGUCCAGAAUGCAGAGAAAAAUGGGAAGGUUUCCCCAAAGUCAGUAUUCUCCUCAGGGAUGCCAUUGAAAAGUUAUUUCCUGAUGCCAUUAGACUGAGAUUUGAAGACAUUCAGCAGAAUAAUGACAUAGUCCAAAGUCUUGCAGCCUUUCAGAAAUAUGGGAAUGAUCAGAUUCCU2000000009UUAGCUCCUAACACAGGCCGAGCGAAUCAGCAGAUGGGAGGGGGAUUCUUUUCCGGUGUGCUCACAGCU2000000009UUAACUGGAGUGGCAGUGGUCCUGCUCGUCUAUCACUGGAGCAGCAGGGAAUCUGAACACGACCUCCUGGUCCACAAGGCUGUGGCCAAAUGGACGGCGGAAGAAGUUGUCCUCUGGCUGGAGCAGCUGGGCCCUUGGGCAUCUCU2000000009UUACAGGGAAAGGUUUUUAUCUGAACGAGUAAAUGGAAGGUGAGGAGCAAAGUCUUCUGACACACCGUGG2000000006ACAUUUUAGAAAACAGCUUUCUUGAGAUAUAAUCCAGGCCAGGCGCGGUGGCUCACACCUGGAUCCCAGC2000000006ACUUUGGGAGGCCGAGGCGGAUCGAUCAUUUGAGGUCAGGAGUUCCAGACCAGCCUGACCAAUAUGAUGAAACCCCAUCUCUACUAAAAAUACAAAAAAAAAAAAUUGGCCAGGCUUGGUAGUGCACACCUUGUAAUCCCAUCUAUUCGGGAGGCUGAGACAGGAGAAUCACUUGAACCCAAGAGGUGGAGGUUACAAUGAGCCAAGAUCAUGCCACUGCACUCCAGCCUAGGCAACAAGGCAAG2000000006ACUCCAUCUCAAAAAGAGAGAGAGAGAGAUGUAAUCUACAUAAAAUUCACACGUUUGAAGUGCACAAUCCAUGGUUUUUAAUGUGUUCACAAAUAGUGUGAUUAUCACCACAGCUGGUUUUAGA2000000006ACAUUUUCAUCACCCUAAAAGAAAGCUUUUACCCUUCAGUCAAUCCUCAUUUCUCCCCAACCCCCAGCCCCUGGCAA2000000006ACACCAUUCUACUUUCUGUCU2000000009UUAUGGAUUUGUCUAUUCUGGACGUUUGAUAUAAAUGGAUUCAUACAA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	198	279	303	338	545	614	760	830	900	1145	1269	1346	1367
Modification Positions	m6A	Y	m6A	Y	Y	Y	Y	m6A	m6A	m6A	m6A	m6A	Y
Genomic Coordinates	16:14644384:+	16:14644465:+	16:14644489:+	16:14644524:+	16:14648509:+	16:14648578:+	16:14649935:+	16:14650005:+	16:14650075:+	16:14650320:+	16:14650444:+	16:14650521:+	16:14650542:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 8cMbzB4aD5Se 93arJtwJmuS9 BkoLW2CBToyL KTLz8piFYdwC WiQcrNTGZHPT BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G XUkp6ghERQML 834aFpha8RvT ksEP666umrV9 BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6 Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 5FhTyQVy2tKW 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn ArijeGVTwYBw BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H nGifePrmgHfe Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U D6ncpa2PPWj3 nfCHyrYzE6fB Lny8GcCeVGc9 UKen6WEino9G BtsJQJ3DteUq Yfn77uLS5tv8	6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BsCW7emuRX7M Lny8GcCeVGc9 LZJKems7W2wi XUkp6ghERQML	93arJtwJmuS9 nfCHyrYzE6fB BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP JkWoGWVwjNda Yfn77uLS5tv8	jNkxUQNx8GRd BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP JkWoGWVwjNda Yfn77uLS5tv8