General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000315491
Gene ID:	ENSG00000258947
Gene Name:	TUBB3
Sequence (UNICHARACTER ENCODING)	CUCAGCAGCCAGCCCGGCCCGCCCGCGCCCGUCCGCAGCCGCCCGCCAGACGCGCCCAGUAUGAGGGAGAUCGUGCACAPCCAGGCCGGCCAGUGCGGCAACCAGAUCGGGGCCAAGUUCUGGGAAGUCAUCAGUGAUGAGCAUGGCAUCGACCCCAGCGGCAACUACGUGGGCGACUCGGACUUGCAGCUGGAGCGGAUCAGCGUCUACUACAACGAGGCCUCUUCUCACAAGUACGUGCCUCGAGCCAUUCUGGUGGACCUGGAACCCGGAACCAUGGACAGUGUCCGCUCAGGGGCCUUUGGACAUCUCUUCAGGCCUGACAAUUUCAUCUUUGGUCAGAGUGGGGCCGGCAACAACUGGGCCAAGGGUCACUACACGGAGGGGGCGGAGCUGGUGGAUUCGGUCCUGGAUGUGGUGCGGAAGGAGUGUGAAAACUGCGACUGCCUGCAGGGCUUCCAGCUGACCCACUCGCUGGGGGGCGGCACGGGCUCCGGCAUGGGCACGUUGCUCAUCAGCAAGGUGCGUGAGGAGUAUCCCGACCGCAUCAUGAACACCUUCAGCGUCGUGCCCUCACCCAAGGUGUCAGACACGGUGGUGGAGCCCUACAACGCCACGCUGUCCAPCCACCAGCUGGUGGAGAACACGGAUGAGЖCCUACUGCAUCGACAACGAGGCGCUCUACGACAUCUGCUUCCGCACCCUCAAGCUGGCCACGCCCACCUACGGGGЖCCUCAACCACCUGGUAUCGGCCACCAUGAGCGGAGUCACCACCUCCUUGCGCUUCCCGGGCCAGCUCAACGCUGACCUGCGCAAGCUGGCCGUCAACAUGGUGCCCUUCCCGCGCCUGCACUUCUUCAUGCCCGGCUUCGCCCCCCUCACAGCCCGGGGCAGCCAGCAGUACCGGGCCCUGACCGUGCCCGAGCUCACCCAGCAGAUGUUCGAUGCCAAGAACAUGAUGGCCGCCUGCGACCCGCGCCACGGCCGCUACCUGACGGUGGCCACCGUGUUCCGGGGCCGCAUGUCCAUGAAGGAGGUGGЖCGAGCAGAUGCUGGCCAUCCAGAGCAAGAACAGCAGCUACUUCGUGGAGUGGAUCCCCAACAACGUGAAGGUGGCCGUGUGUGACAPCCCGCCCCGCGGCCUCAAGAUGUCCUCCACCUUCAUCGGGAACAGCACGGCCAUCCAGGAGCUGUUCAAGCGCAUCUCCGAGCAGUUCACGGCCAUGUUCCGGCGCAAGGCCUUCCUGCACUGGUACACGGGCGAGGGCAUGGЖCGAGAUGGAGUUCACCGAGGCCGAGAGCAACAUGAACGACCUGGUGUCCGAGUACCAGCAGUACCAGGACGCCACGGCCGAGGAЖGAGGGCGAGAUGUACGAAGACGACGAGGAGGAGUCGGAGGCCCAGGGCCCCAAGUGAAGCUGCUCGCAGCUGGAGUGAGAGGCAGGUGGCGGCCGGGGCCGAAGCCAGCAGUGUCUAAACCCCCGGAGCCAUCUUGCUGCCGACACCCUGCUUUCCCCUCGCCCUAGGGCUCCCUUGCCGCCCUCCUGCAGUAUUUAUGGCCUCGUCCUCCCCACCUAGGCCACGUGUGAGCUGCUCCUGUCUCUGUCUUAUUGCAGCUCCAGGCCUGACGUUUUACGGUUUUGUUUUUUACUGGUUUGUGUUUAUAUUUUCGGGGAUACUUAAUAAAUCUAUUGCUGUCAGAUACCCUU
Sequence (SHORT NAMES ENCODING)	CUCAGCAGCCAGCCCGGCCCGCCCGCGCCCGUCCGCAGCCGCCCGCCAGACGCGCCCAGUAUGAGGGAGAUCGUGCACAYCCAGGCCGGCCAGUGCGGCAACCAGAUCGGGGCCAAGUUCUGGGAAGUCAUCAGUGAUGAGCAUGGCAUCGACCCCAGCGGCAACUACGUGGGCGACUCGGACUUGCAGCUGGAGCGGAUCAGCGUCUACUACAACGAGGCCUCUUCUCACAAGUACGUGCCUCGAGCCAUUCUGGUGGACCUGGAACCCGGAACCAUGGACAGUGUCCGCUCAGGGGCCUUUGGACAUCUCUUCAGGCCUGACAAUUUCAUCUUUGGUCAGAGUGGGGCCGGCAACAACUGGGCCAAGGGUCACUACACGGAGGGGGCGGAGCUGGUGGAUUCGGUCCUGGAUGUGGUGCGGAAGGAGUGUGAAAACUGCGACUGCCUGCAGGGCUUCCAGCUGACCCACUCGCUGGGGGGCGGCACGGGCUCCGGCAUGGGCACGUUGCUCAUCAGCAAGGUGCGUGAGGAGUAUCCCGACCGCAUCAUGAACACCUUCAGCGUCGUGCCCUCACCCAAGGUGUCAGACACGGUGGUGGAGCCCUACAACGCCACGCUGUCCAYCCACCAGCUGGUGGAGAACACGGAUGAGm6ACCUACUGCAUCGACAACGAGGCGCUCUACGACAUCUGCUUCCGCACCCUCAAGCUGGCCACGCCCACCUACGGGGm6ACCUCAACCACCUGGUAUCGGCCACCAUGAGCGGAGUCACCACCUCCUUGCGCUUCCCGGGCCAGCUCAACGCUGACCUGCGCAAGCUGGCCGUCAACAUGGUGCCCUUCCCGCGCCUGCACUUCUUCAUGCCCGGCUUCGCCCCCCUCACAGCCCGGGGCAGCCAGCAGUACCGGGCCCUGACCGUGCCCGAGCUCACCCAGCAGAUGUUCGAUGCCAAGAACAUGAUGGCCGCCUGCGACCCGCGCCACGGCCGCUACCUGACGGUGGCCACCGUGUUCCGGGGCCGCAUGUCCAUGAAGGAGGUGGm6ACGAGCAGAUGCUGGCCAUCCAGAGCAAGAACAGCAGCUACUUCGUGGAGUGGAUCCCCAACAACGUGAAGGUGGCCGUGUGUGACAYCCCGCCCCGCGGCCUCAAGAUGUCCUCCACCUUCAUCGGGAACAGCACGGCCAUCCAGGAGCUGUUCAAGCGCAUCUCCGAGCAGUUCACGGCCAUGUUCCGGCGCAAGGCCUUCCUGCACUGGUACACGGGCGAGGGCAUGGm6ACGAGAUGGAGUUCACCGAGGCCGAGAGCAACAUGAACGACCUGGUGUCCGAGUACCAGCAGUACCAGGACGCCACGGCCGAGGAm6AGAGGGCGAGAUGUACGAAGACGACGAGGAGGAGUCGGAGGCCCAGGGCCCCAAGUGAAGCUGCUCGCAGCUGGAGUGAGAGGCAGGUGGCGGCCGGGGCCGAAGCCAGCAGUGUCUAAACCCCCGGAGCCAUCUUGCUGCCGACACCCUGCUUUCCCCUCGCCCUAGGGCUCCCUUGCCGCCCUCCUGCAGUAUUUAUGGCCUCGUCCUCCCCACCUAGGCCACGUGUGAGCUGCUCCUGUCUCUGUCUUAUUGCAGCUCCAGGCCUGACGUUUUACGGUUUUGUUUUUUACUGGUUUGUGUUUAUAUUUUCGGGGAUACUUAAUAAAUCUAUUGCUGUCAGAUACCCUU
Sequence (MODOMICS CODE ENCODING)	CUCAGCAGCCAGCCCGGCCCGCCCGCGCCCGUCCGCAGCCGCCCGCCAGACGCGCCCAGUAUGAGGGAGAUCGUGCACA2000000009UCCAGGCCGGCCAGUGCGGCAACCAGAUCGGGGCCAAGUUCUGGGAAGUCAUCAGUGAUGAGCAUGGCAUCGACCCCAGCGGCAACUACGUGGGCGACUCGGACUUGCAGCUGGAGCGGAUCAGCGUCUACUACAACGAGGCCUCUUCUCACAAGUACGUGCCUCGAGCCAUUCUGGUGGACCUGGAACCCGGAACCAUGGACAGUGUCCGCUCAGGGGCCUUUGGACAUCUCUUCAGGCCUGACAAUUUCAUCUUUGGUCAGAGUGGGGCCGGCAACAACUGGGCCAAGGGUCACUACACGGAGGGGGCGGAGCUGGUGGAUUCGGUCCUGGAUGUGGUGCGGAAGGAGUGUGAAAACUGCGACUGCCUGCAGGGCUUCCAGCUGACCCACUCGCUGGGGGGCGGCACGGGCUCCGGCAUGGGCACGUUGCUCAUCAGCAAGGUGCGUGAGGAGUAUCCCGACCGCAUCAUGAACACCUUCAGCGUCGUGCCCUCACCCAAGGUGUCAGACACGGUGGUGGAGCCCUACAACGCCACGCUGUCCA2000000009UCCACCAGCUGGUGGAGAACACGGAUGAG2000000006ACCUACUGCAUCGACAACGAGGCGCUCUACGACAUCUGCUUCCGCACCCUCAAGCUGGCCACGCCCACCUACGGGG2000000006ACCUCAACCACCUGGUAUCGGCCACCAUGAGCGGAGUCACCACCUCCUUGCGCUUCCCGGGCCAGCUCAACGCUGACCUGCGCAAGCUGGCCGUCAACAUGGUGCCCUUCCCGCGCCUGCACUUCUUCAUGCCCGGCUUCGCCCCCCUCACAGCCCGGGGCAGCCAGCAGUACCGGGCCCUGACCGUGCCCGAGCUCACCCAGCAGAUGUUCGAUGCCAAGAACAUGAUGGCCGCCUGCGACCCGCGCCACGGCCGCUACCUGACGGUGGCCACCGUGUUCCGGGGCCGCAUGUCCAUGAAGGAGGUGG2000000006ACGAGCAGAUGCUGGCCAUCCAGAGCAAGAACAGCAGCUACUUCGUGGAGUGGAUCCCCAACAACGUGAAGGUGGCCGUGUGUGACA2000000009UCCCGCCCCGCGGCCUCAAGAUGUCCUCCACCUUCAUCGGGAACAGCACGGCCAUCCAGGAGCUGUUCAAGCGCAUCUCCGAGCAGUUCACGGCCAUGUUCCGGCGCAAGGCCUUCCUGCACUGGUACACGGGCGAGGGCAUGG2000000006ACGAGAUGGAGUUCACCGAGGCCGAGAGCAACAUGAACGACCUGGUGUCCGAGUACCAGCAGUACCAGGACGCCACGGCCGAGGA2000000006AGAGGGCGAGAUGUACGAAGACGACGAGGAGGAGUCGGAGGCCCAGGGCCCCAAGUGAAGCUGCUCGCAGCUGGAGUGAGAGGCAGGUGGCGGCCGGGGCCGAAGCCAGCAGUGUCUAAACCCCCGGAGCCAUCUUGCUGCCGACACCCUGCUUUCCCCUCGCCCUAGGGCUCCCUUGCCGCCCUCCUGCAGUAUUUAUGGCCUCGUCCUCCCCACCUAGGCCACGUGUGAGCUGCUCCUGUCUCUGUCUUAUUGCAGCUCCAGGCCUGACGUUUUACGGUUUUGUUUUUUACUGGUUUGUGUUUAUAUUUUCGGGGAUACUUAAUAAAUCUAUUGCUGUCAGAUACCCUU

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	80	626	655	731	1040	1127	1271	1356
Modification Positions	Y	Y	m6A	m6A	m6A	Y	m6A	m6A
Genomic Coordinates	16:89923421:+	16:89935017:+	16:89935046:+	16:89935122:+	16:89935431:+	16:89935518:+	16:89935662:+	16:89935747:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	bXBqJigD9oV3 dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr Yfn77uLS5tv8	bXBqJigD9oV3 dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr Yfn77uLS5tv8	bXBqJigD9oV3 dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr Yfn77uLS5tv8	3TeAZFYFxgvp 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U bXBqJigD9oV3 dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr kx7BHU7ZycYE Yfn77uLS5tv8	6UuHp6YApVKv aivdrAsbdKEU gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H Q36pf44ZRvxu QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn	bXBqJigD9oV3 dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr kx7BHU7ZycYE Yfn77uLS5tv8	gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL aJksAshEgQ8U	4HMi5ykupT9V msuJfBpJvM5H NjZ8bGGJsNSR VyCX26p5UBRL